RNA–Protein interactions for RNA: ENST00000485903.6

NFIA-212, Transcript of nuclear factor I A, humanhuman

TSL 5 BASIC

Gene NFIA, Length 1,674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-212ENST00000485903 RTCBQ9Y3I0 505 aaKnown RBP11.16□□□□□ -0.62
NFIA-212ENST00000485903 CD2APQ9Y5K6 639 aa11.16□□□□□ -0.62
NFIA-212ENST00000485903 RRP1P56182 461 aaKnown RBP11.15□□□□□ -0.62
NFIA-212ENST00000485903 BECN1Q14457 450 aa11.15□□□□□ -0.62
NFIA-212ENST00000485903 TRAPPC3LQ5T215 181 aa11.15□□□□□ -0.62
NFIA-212ENST00000485903 ZNF784Q8NCA9 323 aaPredicted RBP11.15□□□□□ -0.62
NFIA-212ENST00000485903 N4BP2Q86UW6 1770 aaPredicted RBP11.15□□□□□ -0.62
NFIA-212ENST00000485903 UQCRHLA0A096LP55 91 aa11.14□□□□□ -0.63
NFIA-212ENST00000485903 ZNF500O60304 480 aaPredicted RBP11.14□□□□□ -0.63
NFIA-212ENST00000485903 UQCRHP07919 91 aa11.14□□□□□ -0.63
NFIA-212ENST00000485903 MMP10P09238 476 aa11.14□□□□□ -0.63
NFIA-212ENST00000485903 GYS1P13807 737 aa11.14□□□□□ -0.63
NFIA-212ENST00000485903 INTS5Q6P9B9 1019 aaKnown RBP11.14□□□□□ -0.63
NFIA-212ENST00000485903 DNAJC10Q8IXB1 793 aa11.14□□□□□ -0.63
NFIA-212ENST00000485903 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
NFIA-212ENST00000485903 GEMIN8Q9NWZ8 242 aaKnown RBP11.14□□□□□ -0.63
NFIA-212ENST00000485903 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
NFIA-212ENST00000485903 WWC3Q9ULE0 1092 aa11.14□□□□□ -0.63
NFIA-212ENST00000485903 HDAC5Q9UQL6 1122 aa11.14□□□□□ -0.63
NFIA-212ENST00000485903 SENP3-EIF4A1A0A087X0R7 540 aa11.13□□□□□ -0.63
NFIA-212ENST00000485903 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
NFIA-212ENST00000485903 SRP68Q9UHB9 627 aaKnown RBP11.13□□□□□ -0.63
NFIA-212ENST00000485903 BRCA1P38398 1863 aaKnown RBP11.12□□□□□ -0.63
NFIA-212ENST00000485903 KDM3BQ7LBC6 1761 aa11.12□□□□□ -0.63
NFIA-212ENST00000485903 CYP19A1P11511 503 aaPredicted RBP11.12□□□□□ -0.63
NFIA-212ENST00000485903 TWISTNBQ3B726 338 aaPredicted RBP11.12□□□□□ -0.63
NFIA-212ENST00000485903 SASS6Q6UVJ0 657 aa11.12□□□□□ -0.63
NFIA-212ENST00000485903 TSR2Q969E8 191 aaKnown RBP11.12□□□□□ -0.63
NFIA-212ENST00000485903 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
NFIA-212ENST00000485903 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
NFIA-212ENST00000485903 RFC4P35249 363 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
NFIA-212ENST00000485903 ALDH1L2Q3SY69 923 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 CCDC30Q5VVM6 783 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 PXDNLA1KZ92 1463 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 HEG1Q9ULI3 1381 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 C10orf71Q711Q0 1435 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
NFIA-212ENST00000485903 STARD3NLO95772 234 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 MCM5P33992 734 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 FAM193AP78312 1265 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 EXOSC9Q06265 439 aaKnown RBP11.11□□□□□ -0.63
NFIA-212ENST00000485903 CEP120Q8N960 986 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 STK31Q9BXU1 1019 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 CCDC87Q9NVE4 849 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 MIS18AQ9NYP9 233 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 KCNG1Q9UIX4 513 aa11.11□□□□□ -0.63
NFIA-212ENST00000485903 USP42Q9H9J4 1324 aaKnown RBP11.1□□□□□ -0.63
NFIA-212ENST00000485903 AFDNP55196 1824 aaKnown RBP11.1□□□□□ -0.63
NFIA-212ENST00000485903 MCM4P33991 863 aa11.1□□□□□ -0.63
NFIA-212ENST00000485903 DDR1Q08345 913 aa11.1□□□□□ -0.63
NFIA-212ENST00000485903 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.1□□□□□ -0.63
NFIA-212ENST00000485903 ZNF496Q96IT1 587 aaPredicted RBP11.1□□□□□ -0.63
NFIA-212ENST00000485903 ZBTB1Q9Y2K1 713 aa11.1□□□□□ -0.63
NFIA-212ENST00000485903 GRIN3BO60391 1043 aa11.09□□□□□ -0.63
NFIA-212ENST00000485903 VAMP4O75379 141 aa11.09□□□□□ -0.63
NFIA-212ENST00000485903 BRPF1P55201 1214 aaPredicted RBP11.09□□□□□ -0.63
NFIA-212ENST00000485903 C8orf34Q49A92 452 aa11.09□□□□□ -0.63
NFIA-212ENST00000485903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
NFIA-212ENST00000485903 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
NFIA-212ENST00000485903 KCNQ3O43525 872 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 MCCP23508 829 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 DBF4Q9UBU7 674 aaPredicted RBP11.08□□□□□ -0.64
NFIA-212ENST00000485903 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 R3HCC1Q9Y3T6 440 aaKnown RBP11.08□□□□□ -0.64
NFIA-212ENST00000485903 A0A0G2JLW4 131 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 CCDC66A2RUB6 948 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 DDX11L8A8MPP1 907 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 IPO8O15397 1037 aaKnown RBP11.08□□□□□ -0.64
NFIA-212ENST00000485903 HDGFL1Q5TGJ6 251 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 USPL1Q5W0Q7 1092 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 TICAM2Q86XR7 235 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 C8orf58Q8NAV2 365 aa11.08□□□□□ -0.64
NFIA-212ENST00000485903 KIF16BQ96L93 1317 aa11.07□□□□□ -0.64
NFIA-212ENST00000485903 COL15A1P39059 1388 aa11.07□□□□□ -0.64
NFIA-212ENST00000485903 NRXN2Q9P2S2 1712 aa11.07□□□□□ -0.64
NFIA-212ENST00000485903 KCNA3P22001 575 aa11.07□□□□□ -0.64
NFIA-212ENST00000485903 TM4SF1P30408 202 aa11.07□□□□□ -0.64
NFIA-212ENST00000485903 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
NFIA-212ENST00000485903 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
NFIA-212ENST00000485903 PARP3Q9Y6F1 533 aa11.07□□□□□ -0.64
NFIA-212ENST00000485903 IBTKQ9P2D0 1353 aaPredicted RBP11.07□□□□□ -0.64
NFIA-212ENST00000485903 ADCY9O60503 1353 aa11.06□□□□□ -0.64
NFIA-212ENST00000485903 POLRMTO00411 1230 aaKnown RBP11.06□□□□□ -0.64
NFIA-212ENST00000485903 TRAK2O60296 914 aa11.06□□□□□ -0.64
NFIA-212ENST00000485903 DPEP1P16444 411 aa11.06□□□□□ -0.64
NFIA-212ENST00000485903 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
NFIA-212ENST00000485903 HYPKQ9NX55 129 aa11.06□□□□□ -0.64
NFIA-212ENST00000485903 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
NFIA-212ENST00000485903 ARFGEF1Q9Y6D6 1849 aa11.06□□□□□ -0.64
NFIA-212ENST00000485903 KDM2BQ8NHM5 1336 aa11.05□□□□□ -0.64
NFIA-212ENST00000485903 ELL2O00472 640 aaPredicted RBP11.05□□□□□ -0.64
NFIA-212ENST00000485903 RARSP54136 660 aaKnown RBP11.05□□□□□ -0.64
NFIA-212ENST00000485903 TGFB2P61812 414 aa11.05□□□□□ -0.64
NFIA-212ENST00000485903 TSPYL6Q8N831 410 aa11.05□□□□□ -0.64
NFIA-212ENST00000485903 ARHGAP45Q92619 1136 aa11.05□□□□□ -0.64
NFIA-212ENST00000485903 DDX21Q9NR30 783 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms