RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
HDAC7-223ENST00000485796 FAM89AQ96GI7 184 aa16.11■□□□□ 0.17
HDAC7-223ENST00000485796 UTP14AQ9BVJ6 771 aaKnown RBP16.11■□□□□ 0.17
HDAC7-223ENST00000485796 ABCC4O15439 1325 aa16.11■□□□□ 0.17
HDAC7-223ENST00000485796 ABCC12Q96J65 1359 aa16.11■□□□□ 0.17
HDAC7-223ENST00000485796 NEXNQ0ZGT2 675 aa16.1■□□□□ 0.17
HDAC7-223ENST00000485796 GCKRQ14397 625 aa16.1■□□□□ 0.17
HDAC7-223ENST00000485796 PARP10Q53GL7 1025 aa16.1■□□□□ 0.17
HDAC7-223ENST00000485796 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
HDAC7-223ENST00000485796 TMEM57Q8N5G2 664 aa16.1■□□□□ 0.17
HDAC7-223ENST00000485796 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
HDAC7-223ENST00000485796 CWC25Q9NXE8 425 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-223ENST00000485796 TRMT112Q9UI30 125 aaKnown RBP16.1■□□□□ 0.17
HDAC7-223ENST00000485796 ANKRD36CQ5JPF3 1778 aa16.09■□□□□ 0.17
HDAC7-223ENST00000485796 CNBD1Q8NA66 436 aa16.09■□□□□ 0.17
HDAC7-223ENST00000485796 SRCIN1Q9C0H9 1055 aa16.09■□□□□ 0.17
HDAC7-223ENST00000485796 AFDNP55196 1824 aaKnown RBP16.09■□□□□ 0.17
HDAC7-223ENST00000485796 HCLS1P14317 486 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-223ENST00000485796 CASP7P55210 303 aa16.08■□□□□ 0.16
HDAC7-223ENST00000485796 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
HDAC7-223ENST00000485796 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
HDAC7-223ENST00000485796 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
HDAC7-223ENST00000485796 DZIP1LQ8IYY4 767 aaKnown RBP16.08■□□□□ 0.16
HDAC7-223ENST00000485796 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-223ENST00000485796 SUPT16HQ9Y5B9 1047 aaKnown RBP16.08■□□□□ 0.16
HDAC7-223ENST00000485796 H7C1W4 665 aa16.07■□□□□ 0.16
HDAC7-223ENST00000485796 ALDH1L1O75891 902 aa16.07■□□□□ 0.16
HDAC7-223ENST00000485796 INTS3Q68E01 1043 aaKnown RBP16.07■□□□□ 0.16
HDAC7-223ENST00000485796 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
HDAC7-223ENST00000485796 PPP1R1BQ9UD71 204 aaPredicted RBP16.07■□□□□ 0.16
HDAC7-223ENST00000485796 NRXN2Q9P2S2 1712 aa16.07■□□□□ 0.16
HDAC7-223ENST00000485796 PCCAP05165 728 aaPredicted RBP16.06■□□□□ 0.16
HDAC7-223ENST00000485796 NBPF7P0C2Y1 421 aaPredicted RBP16.06■□□□□ 0.16
HDAC7-223ENST00000485796 GTF2E1P29083 439 aaPredicted RBP16.06■□□□□ 0.16
HDAC7-223ENST00000485796 UBE3BQ7Z3V4 1068 aa16.06■□□□□ 0.16
HDAC7-223ENST00000485796 ZBTB38Q8NAP3 1195 aaPredicted RBP16.06■□□□□ 0.16
HDAC7-223ENST00000485796 USP44Q9H0E7 712 aa16.06■□□□□ 0.16
HDAC7-223ENST00000485796 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
HDAC7-223ENST00000485796 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
HDAC7-223ENST00000485796 IBTKQ9P2D0 1353 aaPredicted RBP16.05■□□□□ 0.16
HDAC7-223ENST00000485796 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
HDAC7-223ENST00000485796 SH3TC1Q8TE82 1336 aa16.05■□□□□ 0.16
HDAC7-223ENST00000485796 CHRNA5P30532 468 aa16.05■□□□□ 0.16
HDAC7-223ENST00000485796 CCT4P50991 539 aaKnown RBP16.05■□□□□ 0.16
HDAC7-223ENST00000485796 SLC10A5Q5PT55 438 aa16.05■□□□□ 0.16
HDAC7-223ENST00000485796 NLGN2Q8NFZ4 835 aa16.05■□□□□ 0.16
HDAC7-223ENST00000485796 FHDC1Q9C0D6 1143 aaPredicted RBP16.05■□□□□ 0.16
HDAC7-223ENST00000485796 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
HDAC7-223ENST00000485796 GRM8O00222 908 aa16.04■□□□□ 0.16
HDAC7-223ENST00000485796 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
HDAC7-223ENST00000485796 NPHP1O15259 732 aa16.04■□□□□ 0.16
HDAC7-223ENST00000485796 ST5P78524 1137 aa16.04■□□□□ 0.16
HDAC7-223ENST00000485796 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
HDAC7-223ENST00000485796 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
HDAC7-223ENST00000485796 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
HDAC7-223ENST00000485796 MEIS3Q99687 375 aa16.04■□□□□ 0.16
HDAC7-223ENST00000485796 COG6Q9Y2V7 657 aa16.04■□□□□ 0.16
HDAC7-223ENST00000485796 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
HDAC7-223ENST00000485796 SUCLG2Q96I99 432 aa16.03■□□□□ 0.16
HDAC7-223ENST00000485796 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
HDAC7-223ENST00000485796 C9orf78Q9NZ63 289 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-223ENST00000485796 TNRC6CQ9HCJ0 1690 aaKnown RBP16.02■□□□□ 0.16
HDAC7-223ENST00000485796 ANKRD31Q8N7Z5 1873 aa16.02■□□□□ 0.16
HDAC7-223ENST00000485796 MS4A1P11836 297 aa16.02■□□□□ 0.16
HDAC7-223ENST00000485796 DPEP1P16444 411 aa16.02■□□□□ 0.16
HDAC7-223ENST00000485796 ITPRIPQ8IWB1 547 aa16.02■□□□□ 0.16
HDAC7-223ENST00000485796 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.16
HDAC7-223ENST00000485796 WWC3Q9ULE0 1092 aa16.02■□□□□ 0.16
HDAC7-223ENST00000485796 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.16
HDAC7-223ENST00000485796 UTYO14607 1347 aa16.01■□□□□ 0.15
HDAC7-223ENST00000485796 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
HDAC7-223ENST00000485796 KLRG2A4D1S0 409 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-223ENST00000485796 KCNA3P22001 575 aa16.01■□□□□ 0.15
HDAC7-223ENST00000485796 FOXO4P98177 505 aa16.01■□□□□ 0.15
HDAC7-223ENST00000485796 SLC51AQ86UW1 340 aa16.01■□□□□ 0.15
HDAC7-223ENST00000485796 C2CD5Q86YS7 1000 aa16.01■□□□□ 0.15
HDAC7-223ENST00000485796 SYT17Q9BSW7 474 aa16.01■□□□□ 0.15
HDAC7-223ENST00000485796 LRP5O75197 1615 aa16.01■□□□□ 0.15
HDAC7-223ENST00000485796 ZBTB7BO15156 539 aaPredicted RBP16■□□□□ 0.15
HDAC7-223ENST00000485796 IRX6P78412 446 aaPredicted RBP16■□□□□ 0.15
HDAC7-223ENST00000485796 PDE3AQ14432 1141 aa16■□□□□ 0.15
HDAC7-223ENST00000485796 MVPQ14764 893 aaKnown RBP15.99■□□□□ 0.15
HDAC7-223ENST00000485796 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
HDAC7-223ENST00000485796 CRBNQ96SW2 442 aa15.99■□□□□ 0.15
HDAC7-223ENST00000485796 C1orf115Q9H7X2 142 aa15.99■□□□□ 0.15
HDAC7-223ENST00000485796 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
HDAC7-223ENST00000485796 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-223ENST00000485796 PDE8AO60658 829 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 SRGNP10124 158 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 PDE6BP35913 854 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 CRY2Q49AN0 593 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 ANKRD44Q8N8A2 993 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 TTLL11Q8NHH1 800 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 KIAA1551Q9HCM1 1747 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 LRRFIP2Q9Y608 721 aaKnown RBP15.98■□□□□ 0.15
HDAC7-223ENST00000485796 KIF13BQ9NQT8 1826 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 COL4A1P02462 1669 aa15.98■□□□□ 0.15
HDAC7-223ENST00000485796 RIC1Q4ADV7 1423 aa15.97■□□□□ 0.15
HDAC7-223ENST00000485796 CTSWP56202 376 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms