RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ZNF831Q5JPB2 1677 aa20.5■□□□□ 0.87
CTSA-207ENST00000484855 KCNQ2O43526 872 aa20.49■□□□□ 0.87
CTSA-207ENST00000484855 SLC4A3P48751 1232 aa20.49■□□□□ 0.87
CTSA-207ENST00000484855 GIGYF2Q6Y7W6 1299 aaKnown RBP20.49■□□□□ 0.87
CTSA-207ENST00000484855 COPRSQ9NQ92 184 aa20.49■□□□□ 0.87
CTSA-207ENST00000484855 MYH14Q7Z406 1995 aaKnown RBP20.49■□□□□ 0.87
CTSA-207ENST00000484855 TRIM6-TRIM34B2RNG4 842 aa20.49■□□□□ 0.87
CTSA-207ENST00000484855 RFX5P48382 616 aaPredicted RBP20.49■□□□□ 0.87
CTSA-207ENST00000484855 FOXO4P98177 505 aa20.49■□□□□ 0.87
CTSA-207ENST00000484855 BECN1Q14457 450 aa20.49■□□□□ 0.87
CTSA-207ENST00000484855 SASH1O94885 1247 aa20.48■□□□□ 0.87
CTSA-207ENST00000484855 TRIM28Q13263 835 aaKnown RBP20.48■□□□□ 0.87
CTSA-207ENST00000484855 LMBR1LQ6UX01 489 aa20.48■□□□□ 0.87
CTSA-207ENST00000484855 PI4K2BQ8TCG2 481 aa20.48■□□□□ 0.87
CTSA-207ENST00000484855 USP42Q9H9J4 1324 aaKnown RBP20.48■□□□□ 0.87
CTSA-207ENST00000484855 NHSQ6T4R5 1651 aa20.48■□□□□ 0.87
CTSA-207ENST00000484855 TTC41PQ6P2S7 1318 aa20.48■□□□□ 0.87
CTSA-207ENST00000484855 IFIT2P09913 472 aaKnown RBP20.48■□□□□ 0.87
CTSA-207ENST00000484855 HSP90AB3PQ58FF7 597 aa20.48■□□□□ 0.87
CTSA-207ENST00000484855 RILPL2Q969X0 211 aa20.48■□□□□ 0.87
CTSA-207ENST00000484855 AFF2P51816 1311 aa20.47■□□□□ 0.87
CTSA-207ENST00000484855 PTPN12Q05209 780 aaKnown RBP20.47■□□□□ 0.87
CTSA-207ENST00000484855 CCDC87Q9NVE4 849 aa20.47■□□□□ 0.87
CTSA-207ENST00000484855 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
CTSA-207ENST00000484855 BTAF1O14981 1849 aa20.47■□□□□ 0.87
CTSA-207ENST00000484855 HLFQ16534 295 aa20.46■□□□□ 0.87
CTSA-207ENST00000484855 AACSQ86V21 672 aa20.46■□□□□ 0.87
CTSA-207ENST00000484855 GPATCH3Q96I76 525 aa20.46■□□□□ 0.87
CTSA-207ENST00000484855 MYH3P11055 1940 aa20.46■□□□□ 0.87
CTSA-207ENST00000484855 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
CTSA-207ENST00000484855 CRKLP46109 303 aaKnown RBP20.45■□□□□ 0.86
CTSA-207ENST00000484855 ITPK1Q13572 414 aa20.45■□□□□ 0.86
CTSA-207ENST00000484855 INTS5Q6P9B9 1019 aaKnown RBP20.45■□□□□ 0.86
CTSA-207ENST00000484855 GJD4Q96KN9 370 aaPredicted RBP20.45■□□□□ 0.86
CTSA-207ENST00000484855 ERVV-1B6SEH8 477 aa20.44■□□□□ 0.86
CTSA-207ENST00000484855 ERC2O15083 957 aa20.44■□□□□ 0.86
CTSA-207ENST00000484855 PCCAP05165 728 aaPredicted RBP20.44■□□□□ 0.86
CTSA-207ENST00000484855 GLRX3O76003 335 aaKnown RBP20.44■□□□□ 0.86
CTSA-207ENST00000484855 EIF5P55010 431 aaKnown RBP20.44■□□□□ 0.86
CTSA-207ENST00000484855 ECHDC1Q9NTX5 307 aa20.44■□□□□ 0.86
CTSA-207ENST00000484855 TBC1D2BQ9UPU7 963 aa20.44■□□□□ 0.86
CTSA-207ENST00000484855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.44■□□□□ 0.86
CTSA-207ENST00000484855 ATRNO75882 1429 aa20.43■□□□□ 0.86
CTSA-207ENST00000484855 GPTP24298 496 aa20.43■□□□□ 0.86
CTSA-207ENST00000484855 ZBTB38Q8NAP3 1195 aaPredicted RBP20.43■□□□□ 0.86
CTSA-207ENST00000484855 EAF2Q96CJ1 260 aaPredicted RBP20.43■□□□□ 0.86
CTSA-207ENST00000484855 SBF2Q86WG5 1849 aa20.43■□□□□ 0.86
CTSA-207ENST00000484855 REC8O95072 547 aa20.42■□□□□ 0.86
CTSA-207ENST00000484855 NLRP10Q86W26 655 aa20.42■□□□□ 0.86
CTSA-207ENST00000484855 MAP4K4O95819 1239 aaPredicted RBP20.42■□□□□ 0.86
CTSA-207ENST00000484855 CNTROBQ8N137 903 aa20.42■□□□□ 0.86
CTSA-207ENST00000484855 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
CTSA-207ENST00000484855 CHMLP26374 656 aa20.41■□□□□ 0.86
CTSA-207ENST00000484855 FAM89AQ96GI7 184 aa20.41■□□□□ 0.86
CTSA-207ENST00000484855 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
CTSA-207ENST00000484855 CCDC8Q9H0W5 538 aaPredicted RBP20.41■□□□□ 0.86
CTSA-207ENST00000484855 USP26Q9BXU7 913 aa20.41■□□□□ 0.86
CTSA-207ENST00000484855 TRPC5Q9UL62 973 aaPredicted RBP20.41■□□□□ 0.86
CTSA-207ENST00000484855 PLA2G12BQ9BX93 195 aa20.4■□□□□ 0.86
CTSA-207ENST00000484855 TBC1D2Q9BYX2 928 aa20.4■□□□□ 0.86
CTSA-207ENST00000484855 CDHR2Q9BYE9 1310 aa20.4■□□□□ 0.86
CTSA-207ENST00000484855 TFCP2Q12800 502 aa20.39■□□□□ 0.86
CTSA-207ENST00000484855 ESYT1Q9BSJ8 1104 aa20.39■□□□□ 0.86
CTSA-207ENST00000484855 TLR7Q9NYK1 1049 aaKnown RBP20.39■□□□□ 0.85
CTSA-207ENST00000484855 TNNI3KQ59H18 835 aa20.38■□□□□ 0.85
CTSA-207ENST00000484855 KIF2CQ99661 725 aa20.38■□□□□ 0.85
CTSA-207ENST00000484855 FPGT-TNNI3KV9GXZ4 949 aa20.38■□□□□ 0.85
CTSA-207ENST00000484855 FAM182BQ5T319 152 aa20.37■□□□□ 0.85
CTSA-207ENST00000484855 PTF1AQ7RTS3 328 aa20.37■□□□□ 0.85
CTSA-207ENST00000484855 ZNF34Q8IZ26 560 aa20.37■□□□□ 0.85
CTSA-207ENST00000484855 UBN2Q6ZU65 1347 aa20.37■□□□□ 0.85
CTSA-207ENST00000484855 CCDC57Q2TAC2 916 aa20.36■□□□□ 0.85
CTSA-207ENST00000484855 LINC00116Q8NCU8 138 aa20.36■□□□□ 0.85
CTSA-207ENST00000484855 TRMT112Q9UI30 125 aaKnown RBP20.36■□□□□ 0.85
CTSA-207ENST00000484855 LY75O60449 1722 aa20.36■□□□□ 0.85
CTSA-207ENST00000484855 CAMTA2O94983 1202 aa20.35■□□□□ 0.85
CTSA-207ENST00000484855 IL15P40933 162 aaPredicted RBP20.35■□□□□ 0.85
CTSA-207ENST00000484855 ATG9AQ7Z3C6 839 aa20.35■□□□□ 0.85
CTSA-207ENST00000484855 HSCBQ8IWL3 235 aa20.35■□□□□ 0.85
CTSA-207ENST00000484855 ZNF594Q96JF6 807 aaPredicted RBP20.35■□□□□ 0.85
CTSA-207ENST00000484855 EYA2O00167 538 aa20.35■□□□□ 0.85
CTSA-207ENST00000484855 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
CTSA-207ENST00000484855 SYNE4Q8N205 404 aa20.35■□□□□ 0.85
CTSA-207ENST00000484855 TAF1LQ8IZX4 1826 aa20.35■□□□□ 0.85
CTSA-207ENST00000484855 CIAO1O76071 339 aa20.34■□□□□ 0.85
CTSA-207ENST00000484855 CSF1RP07333 972 aa20.34■□□□□ 0.85
CTSA-207ENST00000484855 LAMB2P55268 1798 aa20.34■□□□□ 0.85
CTSA-207ENST00000484855 IRS4O14654 1257 aaPredicted RBP20.34■□□□□ 0.85
CTSA-207ENST00000484855 SEPT12Q8IYM1 358 aa20.34■□□□□ 0.85
CTSA-207ENST00000484855 CCDC85AQ96PX6 553 aaPredicted RBP20.34■□□□□ 0.85
CTSA-207ENST00000484855 DBNLQ9UJU6 430 aaKnown RBP20.34■□□□□ 0.85
CTSA-207ENST00000484855 SCN7AQ01118 1682 aa20.33■□□□□ 0.85
CTSA-207ENST00000484855 LRRC24Q50LG9 513 aa20.33■□□□□ 0.85
CTSA-207ENST00000484855 SNX21Q969T3 373 aa20.33■□□□□ 0.85
CTSA-207ENST00000484855 EVI5LQ96CN4 794 aa20.33■□□□□ 0.85
CTSA-207ENST00000484855 CNTNAP4Q9C0A0 1308 aa20.33■□□□□ 0.85
CTSA-207ENST00000484855 CTSWP56202 376 aa20.32■□□□□ 0.84
CTSA-207ENST00000484855 KCNQ4P56696 695 aa20.32■□□□□ 0.84
CTSA-207ENST00000484855 IFIT5Q13325 482 aaKnown RBP20.32■□□□□ 0.84
CTSA-207ENST00000484855 TAF7LQ5H9L4 462 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms