RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, human

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FNDC3B-210	ENST00000483344	EPB42	P16452	691 aa		7.58	□□□□□ -1.2
FNDC3B-210	ENST00000483344	TYRO3	Q06418	890 aa		7.58	□□□□□ -1.2
FNDC3B-210	ENST00000483344	NUDT16	Q96DE0	195 aa	Known RBP	7.58	□□□□□ -1.2
FNDC3B-210	ENST00000483344	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.58	□□□□□ -1.2
FNDC3B-210	ENST00000483344	NUCKS1	Q9H1E3	243 aa	Known RBP	7.58	□□□□□ -1.2
FNDC3B-210	ENST00000483344	TRIM22	Q8IYM9	498 aa		7.57	□□□□□ -1.2
FNDC3B-210	ENST00000483344	GJD3	Q8N144	294 aa		7.57	□□□□□ -1.2
FNDC3B-210	ENST00000483344	GMCL1	Q96IK5	515 aa		7.57	□□□□□ -1.2
FNDC3B-210	ENST00000483344	DMRTB1	Q96MA1	342 aa		7.57	□□□□□ -1.2
FNDC3B-210	ENST00000483344	FAM129B	Q96TA1	746 aa		7.57	□□□□□ -1.2
FNDC3B-210	ENST00000483344	AMOTL2	Q9Y2J4	779 aa		7.57	□□□□□ -1.2
FNDC3B-210	ENST00000483344	RTCB	Q9Y3I0	505 aa	Known RBP	7.57	□□□□□ -1.2
FNDC3B-210	ENST00000483344	PCDHGC4	Q9Y5F7	938 aa		7.57	□□□□□ -1.2
FNDC3B-210	ENST00000483344	ATXN7	O15265	892 aa	Predicted RBP	7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	THBS1	P07996	1170 aa		7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	ITGA6	P23229	1130 aa		7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	EHHADH	Q08426	723 aa		7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	DBN1	Q16643	649 aa		7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	C8orf34	Q49A92	452 aa		7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	NPAS4	Q8IUM7	802 aa		7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	BRD7	Q9NPI1	651 aa		7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.56	□□□□□ -1.2
FNDC3B-210	ENST00000483344	FAM157B	P0CG42	384 aa		7.55	□□□□□ -1.2
FNDC3B-210	ENST00000483344	CMTR1	Q8N1G2	835 aa	Known RBP	7.55	□□□□□ -1.2
FNDC3B-210	ENST00000483344	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.55	□□□□□ -1.2
FNDC3B-210	ENST00000483344	USP20	Q9Y2K6	914 aa		7.55	□□□□□ -1.2
FNDC3B-210	ENST00000483344	KHNYN	O15037	678 aa	Known RBP	7.54	□□□□□ -1.2
FNDC3B-210	ENST00000483344	TREH	O43280	583 aa		7.54	□□□□□ -1.2
FNDC3B-210	ENST00000483344	UBAP2L	Q14157	1087 aa	Known RBP	7.54	□□□□□ -1.2
FNDC3B-210	ENST00000483344	COL19A1	Q14993	1142 aa		7.54	□□□□□ -1.2
FNDC3B-210	ENST00000483344	GGNBP2	Q9H3C7	697 aa		7.54	□□□□□ -1.2
FNDC3B-210	ENST00000483344	DCDC2B	A2VCK2	349 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	UBAP1L	F5GYI3	381 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	TERT	O14746	1132 aa	Known RBP	7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	GPR182	O15218	404 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	WIPF1	O43516	503 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	PPFIA3	O75145	1194 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	IGHA2	P01877	340 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	KCNQ4	P56696	695 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	PLCB3	Q01970	1234 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	ALKBH8	Q96BT7	664 aa	Known RBP	7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	ZNF837	Q96EG3	531 aa	Predicted RBP	7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	BCL2L13	Q9BXK5	485 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	C11orf16	Q9NQ32	467 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	KCNH4	Q9UQ05	1017 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	KCNMB2	Q9Y691	235 aa		7.53	□□□□□ -1.2
FNDC3B-210	ENST00000483344	EFS	O43281	561 aa		7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	BNIP3L	O60238	219 aa		7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	XYLB	O75191	536 aa		7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	MAPT	P10636	758 aa	Known RBP	7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	GRN	P28799	593 aa	Known RBP	7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	TNP2	Q05952	138 aa		7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	LAMC2	Q13753	1193 aa		7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	TRIP4	Q15650	581 aa	Predicted RBP	7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	FOXR1	Q6PIV2	292 aa		7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	GTPBP3	Q969Y2	492 aa	Known RBP	7.52	□□□□□ -1.21
FNDC3B-210	ENST00000483344	RBM47	A0AV96	593 aa	Known RBP	7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	CDC14C	A4D256	554 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344		A6NHS1	94 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	NEFL	P07196	543 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	FMR1	Q06787	632 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	SFSWAP	Q12872	951 aa	Known RBP	7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	DSC3	Q14574	896 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	EAPP	Q56P03	285 aa	Predicted RBP	7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	PDE12	Q6L8Q7	609 aa	Known RBP	7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	ZNF438	Q7Z4V0	828 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	NPM2	Q86SE8	214 aa	Known RBP	7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	TRERF1	Q96PN7	1200 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	NIF3L1	Q9GZT8	377 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	NDFIP2	Q9NV92	336 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	PHF24	Q9UPV7	400 aa		7.51	□□□□□ -1.21
FNDC3B-210	ENST00000483344	EGFR	P00533	1210 aa		7.5	□□□□□ -1.21
FNDC3B-210	ENST00000483344	P4HB	P07237	508 aa	Known RBP	7.5	□□□□□ -1.21
FNDC3B-210	ENST00000483344	XKR5	Q6UX68	686 aa		7.5	□□□□□ -1.21
FNDC3B-210	ENST00000483344	FBXO33	Q7Z6M2	555 aa		7.5	□□□□□ -1.21
FNDC3B-210	ENST00000483344	GIPC2	Q8TF65	315 aa		7.5	□□□□□ -1.21
FNDC3B-210	ENST00000483344	ABHD17A	Q96GS6	310 aa		7.5	□□□□□ -1.21
FNDC3B-210	ENST00000483344	MARK1	Q9P0L2	795 aa		7.5	□□□□□ -1.21
FNDC3B-210	ENST00000483344	MAPK8	P45983	427 aa		7.49	□□□□□ -1.21
FNDC3B-210	ENST00000483344	RBM25	P49756	843 aa	Known RBP	7.49	□□□□□ -1.21
FNDC3B-210	ENST00000483344	ZNF326	Q5BKZ1	582 aa	Known RBP	7.49	□□□□□ -1.21
FNDC3B-210	ENST00000483344	SV2A	Q7L0J3	742 aa		7.49	□□□□□ -1.21
FNDC3B-210	ENST00000483344	VWA5B2	Q8N398	1253 aa		7.49	□□□□□ -1.21
FNDC3B-210	ENST00000483344	CFHR5	Q9BXR6	569 aa		7.49	□□□□□ -1.21
FNDC3B-210	ENST00000483344	ELP3	Q9H9T3	547 aa		7.49	□□□□□ -1.21
FNDC3B-210	ENST00000483344	STRN4	Q9NRL3	753 aa		7.49	□□□□□ -1.21
FNDC3B-210	ENST00000483344	CCIN	Q13939	588 aa		7.48	□□□□□ -1.21
FNDC3B-210	ENST00000483344	NLRP13	Q86W25	1043 aa		7.48	□□□□□ -1.21
FNDC3B-210	ENST00000483344	NANOS1	Q8WY41	292 aa	Known RBP	7.48	□□□□□ -1.21
FNDC3B-210	ENST00000483344	GSX2	Q9BZM3	304 aa		7.48	□□□□□ -1.21
FNDC3B-210	ENST00000483344	NXF1	Q9UBU9	619 aa	Known RBP	7.48	□□□□□ -1.21
FNDC3B-210	ENST00000483344	STK17A	Q9UEE5	414 aa		7.48	□□□□□ -1.21
FNDC3B-210	ENST00000483344	TNFRSF21	O75509	655 aa		7.47	□□□□□ -1.21
FNDC3B-210	ENST00000483344	ZNF16	P17020	682 aa	Predicted RBP	7.47	□□□□□ -1.21
FNDC3B-210	ENST00000483344	CD33	P20138	364 aa		7.47	□□□□□ -1.21
FNDC3B-210	ENST00000483344	FGFR3	P22607	806 aa		7.47	□□□□□ -1.21
FNDC3B-210	ENST00000483344	FGD1	P98174	961 aa		7.47	□□□□□ -1.21
FNDC3B-210	ENST00000483344	SPEM2	Q0P670	501 aa		7.47	□□□□□ -1.21
FNDC3B-210	ENST00000483344	SNX29	Q8TEQ0	813 aa		7.47	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms