RNA–Protein interactions for RNA: ENST00000481273.5

PTK7-213, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTK7, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-213ENST00000481273 BRF1Q92994 677 aa12.9□□□□□ -0.34
PTK7-213ENST00000481273 ST7Q9NRC1 585 aa12.9□□□□□ -0.34
PTK7-213ENST00000481273 CCDC144BQ3MJ40 725 aa12.9□□□□□ -0.34
PTK7-213ENST00000481273 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
PTK7-213ENST00000481273 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
PTK7-213ENST00000481273 ZC3H13Q5T200 1668 aaKnown RBP12.9□□□□□ -0.34
PTK7-213ENST00000481273 IFT172Q9UG01 1749 aa12.9□□□□□ -0.34
PTK7-213ENST00000481273 METP08581 1390 aa12.9□□□□□ -0.34
PTK7-213ENST00000481273 ZNF215Q9UL58 517 aaPredicted RBP12.9□□□□□ -0.35
PTK7-213ENST00000481273 KNDC1Q76NI1 1749 aa12.89□□□□□ -0.35
PTK7-213ENST00000481273 ELF2Q15723 593 aa12.89□□□□□ -0.35
PTK7-213ENST00000481273 TTC14Q96N46 770 aa12.89□□□□□ -0.35
PTK7-213ENST00000481273 TLR7Q9NYK1 1049 aaKnown RBP12.89□□□□□ -0.35
PTK7-213ENST00000481273 MAP3K2Q9Y2U5 619 aa12.89□□□□□ -0.35
PTK7-213ENST00000481273 PTPRMP28827 1452 aa12.89□□□□□ -0.35
PTK7-213ENST00000481273 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
PTK7-213ENST00000481273 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
PTK7-213ENST00000481273 POLR3GO15318 223 aaPredicted RBP12.88□□□□□ -0.35
PTK7-213ENST00000481273 PDCP20941 246 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 RNF20Q5VTR2 975 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 CCDC73Q6ZRK6 1079 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
PTK7-213ENST00000481273 FRMPD1Q5SYB0 1578 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 A0A0D9SFI3 127 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 TPM3P06753 285 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 ZNF75DP51815 510 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
PTK7-213ENST00000481273 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
PTK7-213ENST00000481273 NEUROD6Q96NK8 337 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 STAP2Q9UGK3 403 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 KINO60870 393 aaKnown RBP12.88□□□□□ -0.35
PTK7-213ENST00000481273 SLFNL1Q499Z3 407 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
PTK7-213ENST00000481273 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
PTK7-213ENST00000481273 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
PTK7-213ENST00000481273 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 PSMA5P28066 241 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
PTK7-213ENST00000481273 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
PTK7-213ENST00000481273 SPTLC3Q9NUV7 552 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 GTPBP4Q9BZE4 634 aaKnown RBP12.87□□□□□ -0.35
PTK7-213ENST00000481273 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
PTK7-213ENST00000481273 NCOA5Q9HCD5 579 aaKnown RBP12.87□□□□□ -0.35
PTK7-213ENST00000481273 KIF24Q5T7B8 1368 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 NEXMIFQ5QGS0 1516 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 AOPEPQ8N6M6 819 aa12.87□□□□□ -0.35
PTK7-213ENST00000481273 ARHGEF28Q8N1W1 1705 aaKnown RBP12.86□□□□□ -0.35
PTK7-213ENST00000481273 KIAA0232Q92628 1395 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 SLC27A2O14975 620 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 POLR3DP05423 398 aaPredicted RBP12.86□□□□□ -0.35
PTK7-213ENST00000481273 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 C11orf57Q6ZUT1 292 aaPredicted RBP12.86□□□□□ -0.35
PTK7-213ENST00000481273 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
PTK7-213ENST00000481273 RIC3Q7Z5B4 369 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 CCAR1Q8IX12 1150 aaKnown RBP12.86□□□□□ -0.35
PTK7-213ENST00000481273 DNAJC5Q9H3Z4 198 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 CPS1P31327 1500 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 SALL3Q9BXA9 1300 aa12.86□□□□□ -0.35
PTK7-213ENST00000481273 ZNF589Q86UQ0 364 aaPredicted RBP12.85□□□□□ -0.35
PTK7-213ENST00000481273 LRRC59Q96AG4 307 aaKnown RBP12.85□□□□□ -0.35
PTK7-213ENST00000481273 CEBPAP49715 358 aaPredicted RBP12.85□□□□□ -0.35
PTK7-213ENST00000481273 PROSER3Q2NL68 480 aa12.85□□□□□ -0.35
PTK7-213ENST00000481273 ZNF530Q6P9A1 599 aaPredicted RBP12.85□□□□□ -0.35
PTK7-213ENST00000481273 Q6ZUG5 572 aa12.85□□□□□ -0.35
PTK7-213ENST00000481273 SMTNL1A8MU46 457 aa12.85□□□□□ -0.35
PTK7-213ENST00000481273 ST3GAL1Q11201 340 aa12.85□□□□□ -0.35
PTK7-213ENST00000481273 EAF2Q96CJ1 260 aaPredicted RBP12.85□□□□□ -0.35
PTK7-213ENST00000481273 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
PTK7-213ENST00000481273 PLCD3Q8N3E9 789 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 FSIP1Q8NA03 581 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 SKIDA1Q1XH10 827 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 TMC6Q7Z403 805 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 PGBD1Q96JS3 809 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 DDX19AQ9NUU7 478 aaKnown RBP12.84□□□□□ -0.35
PTK7-213ENST00000481273 A0A1B0GVL5 298 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
PTK7-213ENST00000481273 ERCC6LQ2NKX8 1250 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 SYT10Q6XYQ8 523 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 EVI5LQ96CN4 794 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 OGFRQ9NZT2 677 aa12.84□□□□□ -0.35
PTK7-213ENST00000481273 NPHP3Q7Z494 1330 aa12.83□□□□□ -0.35
PTK7-213ENST00000481273 ZSWIM6Q9HCJ5 1215 aa12.83□□□□□ -0.36
PTK7-213ENST00000481273 USP32Q8NFA0 1604 aa12.83□□□□□ -0.36
PTK7-213ENST00000481273 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTK7-213ENST00000481273 SLC39A6Q13433 755 aa12.83□□□□□ -0.36
PTK7-213ENST00000481273 CCDC85AQ96PX6 553 aaPredicted RBP12.83□□□□□ -0.36
PTK7-213ENST00000481273 ZSWIM4Q9H7M6 989 aa12.83□□□□□ -0.36
PTK7-213ENST00000481273 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
PTK7-213ENST00000481273 CREBRFQ8IUR6 639 aa12.82□□□□□ -0.36
PTK7-213ENST00000481273 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
PTK7-213ENST00000481273 LMOD1P29536 600 aaPredicted RBP12.82□□□□□ -0.36
PTK7-213ENST00000481273 HAND2P61296 217 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms