RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 NOS3P29474 1203 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 SCNN1DP51172 638 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 SMTNP53814 917 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 GTF2IP78347 998 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 NCOA4Q13772 614 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 C8orf86Q6ZUL3 223 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 PPARGC1BQ86YN6 1023 aaKnown RBP3.15□□□□□ -1.91
SRRM1-211ENST00000478890 DEPDC4Q8N2C3 294 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 PHTF2Q8N3S3 785 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 ZSCAN18Q8TBC5 510 aaPredicted RBP3.15□□□□□ -1.91
SRRM1-211ENST00000478890 POM121Q96HA1 1249 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 SLC38A3Q99624 504 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 CRISPLD1Q9H336 500 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 NEUROD4Q9HD90 331 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 ZNF232Q9UNY5 417 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 CHMP3Q9Y3E7 222 aa3.15□□□□□ -1.91
SRRM1-211ENST00000478890 USP17L5A8MUK1 530 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 ADARB2-AS1A8MUL3 147 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 KHNYNO15037 678 aaKnown RBP3.14□□□□□ -1.91
SRRM1-211ENST00000478890 SUV39H1O43463 412 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 TRIM50Q86XT4 487 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 C1orf216Q8TAB5 229 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 TMPRSS5Q9H3S3 457 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 LMCD1Q9NZU5 365 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 STARD13Q9Y3M8 1113 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 PARP3Q9Y6F1 533 aa3.14□□□□□ -1.91
SRRM1-211ENST00000478890 A6NJY4 79 aa3.13□□□□□ -1.91
SRRM1-211ENST00000478890 ATXN7O15265 892 aaPredicted RBP3.13□□□□□ -1.91
SRRM1-211ENST00000478890 CD33P20138 364 aa3.13□□□□□ -1.91
SRRM1-211ENST00000478890 ATP1A2P50993 1020 aa3.13□□□□□ -1.91
SRRM1-211ENST00000478890 BHLHE22Q8NFJ8 381 aaPredicted RBP3.13□□□□□ -1.91
SRRM1-211ENST00000478890 TPCN2Q8NHX9 752 aa3.13□□□□□ -1.91
SRRM1-211ENST00000478890 HRH3Q9Y5N1 445 aa3.13□□□□□ -1.91
SRRM1-211ENST00000478890 A0A1W2PNR3 127 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 USP17L3A6NCW0 530 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 USP17L4A6NCW7 530 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 POM121CA8CG34 1229 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 TMEM229AB2RXF0 380 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 LZTS3O60299 673 aaPredicted RBP3.12□□□□□ -1.91
SRRM1-211ENST00000478890 LILRB5O75023 590 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 MAPTP10636 758 aaKnown RBP3.12□□□□□ -1.91
SRRM1-211ENST00000478890 ATP4AP20648 1035 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 CTSWP56202 376 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 TBCELQ5QJ74 424 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 USP17L2Q6R6M4 530 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 LCNL1Q6ZST4 164 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 USP17L1Q7RTZ2 530 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 NLRP8Q86W28 1048 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 SLC9A9Q8IVB4 645 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 DZIP1LQ8IYY4 767 aaKnown RBP3.12□□□□□ -1.91
SRRM1-211ENST00000478890 FMR1NBQ8N0W7 255 aaPredicted RBP3.12□□□□□ -1.91
SRRM1-211ENST00000478890 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.12□□□□□ -1.91
SRRM1-211ENST00000478890 NFATC2IPQ8NCF5 419 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 RHPN1Q8TCX5 695 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 ZNF594Q96JF6 807 aaPredicted RBP3.12□□□□□ -1.91
SRRM1-211ENST00000478890 ZIC5Q96T25 663 aa3.12□□□□□ -1.91
SRRM1-211ENST00000478890 ZCCHC2Q9C0B9 1178 aaKnown RBP3.12□□□□□ -1.91
SRRM1-211ENST00000478890 ANGEL1Q9UNK9 670 aaKnown RBP3.12□□□□□ -1.91
SRRM1-211ENST00000478890 SERTM1A2A2V5 107 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 CDK2AP1O14519 115 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 ATP9BO43861 1147 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 GRNP28799 593 aaKnown RBP3.11□□□□□ -1.91
SRRM1-211ENST00000478890 TNP2Q05952 138 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 HDGFL1Q5TGJ6 251 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 CCDC102BQ68D86 513 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 LRRC69Q6ZNQ3 347 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 PROSER2Q86WR7 435 aaPredicted RBP3.11□□□□□ -1.91
SRRM1-211ENST00000478890 CILP2Q8IUL8 1156 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 L3MBTL2Q969R5 705 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 ALG2Q9H553 416 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 DNAAF2Q9NVR5 837 aaKnown RBP3.11□□□□□ -1.91
SRRM1-211ENST00000478890 ZNF358Q9NW07 568 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 ZDHHC3Q9NYG2 299 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 CHIC2Q9UKJ5 165 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 RAXQ9Y2V3 346 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 USP3Q9Y6I4 520 aa3.11□□□□□ -1.91
SRRM1-211ENST00000478890 SIN3BO75182 1162 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 CFPP27918 469 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 TXLNAP40222 546 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 PSMA6P60900 246 aaKnown RBP3.1□□□□□ -1.91
SRRM1-211ENST00000478890 TBC1D8BQ0IIM8 1120 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 NEUROD1Q13562 356 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 MTFR1Q15390 333 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 C20orf204Q6ZNR8 217 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 SYT9Q86SS6 491 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 TNS4Q8IZW8 715 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 OGFOD1Q8N543 542 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 CHMP7Q8WUX9 453 aaPredicted RBP3.1□□□□□ -1.91
SRRM1-211ENST00000478890 GLMNQ92990 594 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 CLUAP1Q96AJ1 413 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 NGLY1Q96IV0 654 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 CALR3Q96L12 384 aaKnown RBP3.1□□□□□ -1.91
SRRM1-211ENST00000478890 SLC4A9Q96Q91 983 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 MARK1Q9P0L2 795 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 SCHIP1Q9P0W5 487 aaPredicted RBP3.1□□□□□ -1.91
SRRM1-211ENST00000478890 MKRN1Q9UHC7 482 aaKnown RBP3.1□□□□□ -1.91
SRRM1-211ENST00000478890 PCDHGA11Q9Y5H2 935 aa3.1□□□□□ -1.91
SRRM1-211ENST00000478890 PALM3A6NDB9 673 aaPredicted RBP3.09□□□□□ -1.91
SRRM1-211ENST00000478890 PPP1R12BO60237 982 aaPredicted RBP3.09□□□□□ -1.91
SRRM1-211ENST00000478890 FAM157BP0CG42 384 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms