RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CCDC125Q86Z20 511 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 FAM186BQ8IYM0 893 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 MICAL1Q8TDZ2 1067 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 LEO1Q8WVC0 666 aaPredicted RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 RPRD1BQ9NQG5 326 aaKnown RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 ATAD2Q6PL18 1390 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CALM1P0DP23 149 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CALM2P0DP24 149 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 CALM3P0DP25 149 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 DEKP35659 375 aaKnown RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 GNAI1P63096 354 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 OTUD6BQ8N6M0 293 aa6.18□□□□□ -1.42
USF3-202ENST00000478658 ZNF526Q8TF50 670 aaPredicted RBP6.18□□□□□ -1.42
USF3-202ENST00000478658 EVC2Q86UK5 1308 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 CCDC160A6NGH7 325 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 EIF5P55010 431 aaKnown RBP6.17□□□□□ -1.42
USF3-202ENST00000478658 SF3A3Q12874 501 aaKnown RBP eCLIP6.17□□□□□ -1.42
USF3-202ENST00000478658 CCDC114Q96M63 670 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 WDR70Q9NW82 654 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 FAF1Q9UNN5 650 aaPredicted RBP6.17□□□□□ -1.42
USF3-202ENST00000478658 FAN1Q9Y2M0 1017 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 EIF2B5Q13144 721 aaKnown RBP6.17□□□□□ -1.42
USF3-202ENST00000478658 HAUS7Q99871 368 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 CFAP70Q5T0N1 1121 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 HACE1Q8IYU2 909 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 KLHL34Q8N239 644 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 ZMYND8Q9ULU4 1186 aaPredicted RBP6.17□□□□□ -1.42
USF3-202ENST00000478658 U3KPZ7 1027 aaPredicted RBP6.17□□□□□ -1.42
USF3-202ENST00000478658 LMNAP02545 664 aaKnown RBP6.17□□□□□ -1.42
USF3-202ENST00000478658 ANKRD45Q5TZF3 282 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 ARFGAP2Q8N6H7 521 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 RSRC1Q96IZ7 334 aaKnown RBP6.17□□□□□ -1.42
USF3-202ENST00000478658 PLEKHH1Q9ULM0 1364 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 CCDC78A2IDD5 438 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 STX6O43752 255 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 CALML3P27482 149 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 GBP1P32455 592 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 KANK3Q6NY19 840 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 P3H3Q8IVL6 736 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 SPC24Q8NBT2 197 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 SDCCAG3Q96C92 435 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 COG3Q96JB2 828 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 GDAP1L1Q96MZ0 367 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 PPP1R12CQ9BZL4 782 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 TRIM45Q9H8W5 580 aaPredicted RBP6.17□□□□□ -1.42
USF3-202ENST00000478658 SLC4A10Q6U841 1118 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 WHAMMQ8TF30 809 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 KCNG1Q9UIX4 513 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 ORC6Q9Y5N6 252 aa6.17□□□□□ -1.42
USF3-202ENST00000478658 FAM13AO94988 1023 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
USF3-202ENST00000478658 MYO1BO43795 1136 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 IFNA8P32881 189 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 PDCLQ13371 301 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 KIAA0753Q2KHM9 967 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 GKAP1Q5VSY0 366 aaPredicted RBP6.16□□□□□ -1.42
USF3-202ENST00000478658 CCDC144CPQ8IYA2 1237 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 ATP6V0A4Q9HBG4 840 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 STRN4Q9NRL3 753 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 FLOT1O75955 427 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 MTIF2P46199 727 aaKnown RBP6.16□□□□□ -1.42
USF3-202ENST00000478658 GPR161Q8N6U8 529 aaKnown RBP6.16□□□□□ -1.42
USF3-202ENST00000478658 ARID3CA6NKF2 412 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 TBC1D12O60347 775 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 ATF3P18847 181 aa6.16□□□□□ -1.42
USF3-202ENST00000478658 CCT6AP40227 531 aaKnown RBP6.16□□□□□ -1.42
USF3-202ENST00000478658 NMIQ13287 307 aaPredicted RBP6.16□□□□□ -1.42
USF3-202ENST00000478658 STK38Q15208 465 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 MIER3Q7Z3K6 550 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 PDCD7Q8N8D1 485 aaKnown RBP6.15□□□□□ -1.42
USF3-202ENST00000478658 PIP4K2CQ8TBX8 421 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 MYCBPQ99417 103 aaPredicted RBP6.15□□□□□ -1.42
USF3-202ENST00000478658 NDEL1Q9GZM8 345 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 RCAN3Q9UKA8 241 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 KIF27Q86VH2 1401 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 LIG1P18858 919 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 SPECC1Q5M775 1068 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 LUZP2Q86TE4 346 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 HELBQ8NG08 1087 aaPredicted RBP6.15□□□□□ -1.42
USF3-202ENST00000478658 ANKRD24Q8TF21 1146 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 GFM2Q969S9 779 aaKnown RBP6.15□□□□□ -1.42
USF3-202ENST00000478658 HNRNPCL2B2RXH8 293 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 HNRNPCL1O60812 293 aaKnown RBP6.15□□□□□ -1.42
USF3-202ENST00000478658 BPIFB4P59827 614 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 BBOF1Q8ND07 529 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 ENOX1Q8TC92 643 aaKnown RBP6.15□□□□□ -1.42
USF3-202ENST00000478658 GOPCQ9HD26 462 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 RPGRIP1LQ68CZ1 1315 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 BAZ1BQ9UIG0 1483 aaKnown RBP6.15□□□□□ -1.42
USF3-202ENST00000478658 PPP6R3Q5H9R7 873 aaPredicted RBP6.15□□□□□ -1.42
USF3-202ENST00000478658 SATB2Q9UPW6 733 aa6.15□□□□□ -1.42
USF3-202ENST00000478658 CTAGE15A4D2H0 777 aa6.15□□□□□ -1.43
USF3-202ENST00000478658 ZNF263O14978 683 aa6.15□□□□□ -1.43
USF3-202ENST00000478658 TBCAO75347 108 aaKnown RBP6.15□□□□□ -1.43
USF3-202ENST00000478658 ATP11AP98196 1134 aa6.15□□□□□ -1.43
USF3-202ENST00000478658 ANKRD35Q8N283 1001 aa6.15□□□□□ -1.43
USF3-202ENST00000478658 HOOK2Q96ED9 719 aa6.15□□□□□ -1.43
USF3-202ENST00000478658 BEGAINQ9BUH8 593 aa6.15□□□□□ -1.43
USF3-202ENST00000478658 CCDC113Q9H0I3 377 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms