RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-204ENST00000478061 TRMT112Q9UI30 125 aaKnown RBP16.29■□□□□ 0.2
RBM28-204ENST00000478061 NOB1Q9ULX3 412 aaKnown RBP16.29■□□□□ 0.2
RBM28-204ENST00000478061 ABCC12Q96J65 1359 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 RNF123Q5XPI4 1314 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 NEURL1BA8MQ27 555 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 DPEP1P16444 411 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 CWF19L2Q2TBE0 894 aaKnown RBP16.28■□□□□ 0.2
RBM28-204ENST00000478061 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 CWC25Q9NXE8 425 aaPredicted RBP16.28■□□□□ 0.2
RBM28-204ENST00000478061 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
RBM28-204ENST00000478061 KIF16BQ96L93 1317 aa16.27■□□□□ 0.2
RBM28-204ENST00000478061 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.2
RBM28-204ENST00000478061 CHRNA5P30532 468 aa16.27■□□□□ 0.2
RBM28-204ENST00000478061 BEND3Q5T5X7 828 aa16.27■□□□□ 0.2
RBM28-204ENST00000478061 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
RBM28-204ENST00000478061 SH3TC1Q8TE82 1336 aa16.26■□□□□ 0.19
RBM28-204ENST00000478061 KCNA3P22001 575 aa16.26■□□□□ 0.19
RBM28-204ENST00000478061 PDE6BP35913 854 aa16.26■□□□□ 0.19
RBM28-204ENST00000478061 SLC10A5Q5PT55 438 aa16.26■□□□□ 0.19
RBM28-204ENST00000478061 SLC4A10Q6U841 1118 aa16.26■□□□□ 0.19
RBM28-204ENST00000478061 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
RBM28-204ENST00000478061 KLRG2A4D1S0 409 aaPredicted RBP16.25■□□□□ 0.19
RBM28-204ENST00000478061 PCCAP05165 728 aaPredicted RBP16.25■□□□□ 0.19
RBM28-204ENST00000478061 GCKRQ14397 625 aa16.25■□□□□ 0.19
RBM28-204ENST00000478061 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
RBM28-204ENST00000478061 ARHGAP45Q92619 1136 aa16.25■□□□□ 0.19
RBM28-204ENST00000478061 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
RBM28-204ENST00000478061 H0YIN7 160 aa16.24■□□□□ 0.19
RBM28-204ENST00000478061 IPO8O15397 1037 aaKnown RBP16.24■□□□□ 0.19
RBM28-204ENST00000478061 HCLS1P14317 486 aaPredicted RBP16.24■□□□□ 0.19
RBM28-204ENST00000478061 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
RBM28-204ENST00000478061 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
RBM28-204ENST00000478061 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
RBM28-204ENST00000478061 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
RBM28-204ENST00000478061 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
RBM28-204ENST00000478061 RIC1Q4ADV7 1423 aa16.24■□□□□ 0.19
RBM28-204ENST00000478061 ANKRD31Q8N7Z5 1873 aa16.23■□□□□ 0.19
RBM28-204ENST00000478061 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
RBM28-204ENST00000478061 IRS4O14654 1257 aaPredicted RBP16.23■□□□□ 0.19
RBM28-204ENST00000478061 ALDH1L1O75891 902 aa16.23■□□□□ 0.19
RBM28-204ENST00000478061 SRGNP10124 158 aa16.23■□□□□ 0.19
RBM28-204ENST00000478061 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
RBM28-204ENST00000478061 SRCIN1Q9C0H9 1055 aa16.23■□□□□ 0.19
RBM28-204ENST00000478061 H7C1W4 665 aa16.22■□□□□ 0.19
RBM28-204ENST00000478061 TRIM27P14373 513 aa16.22■□□□□ 0.19
RBM28-204ENST00000478061 CRY2Q49AN0 593 aa16.22■□□□□ 0.19
RBM28-204ENST00000478061 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
RBM28-204ENST00000478061 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
RBM28-204ENST00000478061 WWC3Q9ULE0 1092 aa16.22■□□□□ 0.19
RBM28-204ENST00000478061 CASP7P55210 303 aa16.21■□□□□ 0.19
RBM28-204ENST00000478061 UBE3BQ7Z3V4 1068 aa16.21■□□□□ 0.19
RBM28-204ENST00000478061 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
RBM28-204ENST00000478061 TNNQ9UQP3 1299 aa16.21■□□□□ 0.19
RBM28-204ENST00000478061 CDHR2Q9BYE9 1310 aa16.2■□□□□ 0.18
RBM28-204ENST00000478061 NPR1P16066 1061 aa16.2■□□□□ 0.18
RBM28-204ENST00000478061 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
RBM28-204ENST00000478061 STYK1Q6J9G0 422 aa16.2■□□□□ 0.18
RBM28-204ENST00000478061 ZNF622Q969S3 477 aaKnown RBP eCLIP16.2■□□□□ 0.181e-9■■■□□ 15.4
RBM28-204ENST00000478061 MASTLQ96GX5 879 aa16.2■□□□□ 0.18
RBM28-204ENST00000478061 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
RBM28-204ENST00000478061 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
RBM28-204ENST00000478061 ABCC4O15439 1325 aa16.19■□□□□ 0.18
RBM28-204ENST00000478061 GRM8O00222 908 aa16.19■□□□□ 0.18
RBM28-204ENST00000478061 HSP90B1P14625 803 aaKnown RBP16.19■□□□□ 0.18
RBM28-204ENST00000478061 YBX3P16989 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
RBM28-204ENST00000478061 CCT4P50991 539 aaKnown RBP16.19■□□□□ 0.18
RBM28-204ENST00000478061 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
RBM28-204ENST00000478061 PELP1Q8IZL8 1130 aaKnown RBP16.19■□□□□ 0.18
RBM28-204ENST00000478061 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
RBM28-204ENST00000478061 PDE8AO60658 829 aa16.18■□□□□ 0.18
RBM28-204ENST00000478061 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
RBM28-204ENST00000478061 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
RBM28-204ENST00000478061 GPR162Q16538 588 aa16.18■□□□□ 0.18
RBM28-204ENST00000478061 INTS3Q68E01 1043 aaKnown RBP16.18■□□□□ 0.18
RBM28-204ENST00000478061 RPGRQ92834 1020 aaKnown RBP16.18■□□□□ 0.18
RBM28-204ENST00000478061 CLUAP1Q96AJ1 413 aa16.18■□□□□ 0.18
RBM28-204ENST00000478061 C9orf78Q9NZ63 289 aaPredicted RBP16.18■□□□□ 0.18
RBM28-204ENST00000478061 BCS1LQ9Y276 419 aa16.18■□□□□ 0.18
RBM28-204ENST00000478061 COL11A2P13942 1736 aaPredicted RBP16.18■□□□□ 0.18
RBM28-204ENST00000478061 CNKSR1Q969H4 720 aa16.17■□□□□ 0.18
RBM28-204ENST00000478061 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
RBM28-204ENST00000478061 UTYO14607 1347 aa16.17■□□□□ 0.18
RBM28-204ENST00000478061 NBPF7P0C2Y1 421 aaPredicted RBP16.16■□□□□ 0.18
RBM28-204ENST00000478061 CTSWP56202 376 aa16.16■□□□□ 0.18
RBM28-204ENST00000478061 RBM17Q96I25 401 aaKnown RBP16.16■□□□□ 0.18
RBM28-204ENST00000478061 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
RBM28-204ENST00000478061 USP44Q9H0E7 712 aa16.16■□□□□ 0.18
RBM28-204ENST00000478061 RLBP1P12271 317 aa16.15■□□□□ 0.18
RBM28-204ENST00000478061 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
RBM28-204ENST00000478061 DDX60Q8IY21 1712 aaKnown RBP16.15■□□□□ 0.18
RBM28-204ENST00000478061 DZIP1LQ8IYY4 767 aaKnown RBP16.15■□□□□ 0.18
RBM28-204ENST00000478061 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
RBM28-204ENST00000478061 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
RBM28-204ENST00000478061 PLIN1O60240 522 aa16.14■□□□□ 0.17
RBM28-204ENST00000478061 ALDH1B1P30837 517 aa16.14■□□□□ 0.17
RBM28-204ENST00000478061 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
RBM28-204ENST00000478061 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms