RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 IGSF3O75054 1194 aa13.01□□□□□ -0.33
COL27A1-204ENST00000477421 SMC2O95347 1197 aa13.01□□□□□ -0.33
COL27A1-204ENST00000477421 CCDC183Q5T5S1 534 aa13.01□□□□□ -0.33
COL27A1-204ENST00000477421 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
COL27A1-204ENST00000477421 A1BGP04217 495 aa13□□□□□ -0.33
COL27A1-204ENST00000477421 SIRT1Q96EB6 747 aa13□□□□□ -0.33
COL27A1-204ENST00000477421 SYT1P21579 422 aa13□□□□□ -0.33
COL27A1-204ENST00000477421 IMMTQ16891 758 aaKnown RBP13□□□□□ -0.33
COL27A1-204ENST00000477421 LRP2BPQ9P2M1 347 aa13□□□□□ -0.33
COL27A1-204ENST00000477421 IQSEC3Q9UPP2 1182 aaPredicted RBP13□□□□□ -0.33
COL27A1-204ENST00000477421 POLR3DP05423 398 aaPredicted RBP13□□□□□ -0.33
COL27A1-204ENST00000477421 TDO2P48775 406 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 GLI2P10070 1586 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 SGSM2O43147 1006 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
COL27A1-204ENST00000477421 CREB3L3Q68CJ9 461 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
COL27A1-204ENST00000477421 AIDAQ96BJ3 306 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 ZNF396Q96N95 335 aaPredicted RBP12.99□□□□□ -0.33
COL27A1-204ENST00000477421 DBNDD2Q9BQY9 259 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 USP6P35125 1406 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 NPHP3Q7Z494 1330 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 ZNF594Q96JF6 807 aaPredicted RBP12.99□□□□□ -0.33
COL27A1-204ENST00000477421 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 SNX14Q9Y5W7 946 aa12.99□□□□□ -0.33
COL27A1-204ENST00000477421 CTNNA3Q9UI47 895 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 IGSF1Q8N6C5 1336 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 A2ML1A8K2U0 1454 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
COL27A1-204ENST00000477421 CEP152O94986 1710 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-204ENST00000477421 SART3Q15020 963 aaKnown RBP12.98□□□□□ -0.33
COL27A1-204ENST00000477421 LRSAM1Q6UWE0 723 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 RBSNQ9H1K0 784 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 RAI14Q9P0K7 980 aa12.98□□□□□ -0.33
COL27A1-204ENST00000477421 MARCH6O60337 910 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 PDILTQ8N807 584 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 FAM89AQ96GI7 184 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 SCAND2PQ9GZW5 306 aaPredicted RBP12.97□□□□□ -0.33
COL27A1-204ENST00000477421 ATP7BP35670 1465 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 PPRC1Q5VV67 1664 aaKnown RBP12.97□□□□□ -0.33
COL27A1-204ENST00000477421 ARHGAP31Q2M1Z3 1444 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 ADCY5O95622 1261 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 UBE2HP62256 183 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 ISM2Q6H9L7 571 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 Q6ZUG5 572 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 EAF2Q96CJ1 260 aaPredicted RBP12.97□□□□□ -0.33
COL27A1-204ENST00000477421 ADGRB3O60242 1522 aa12.97□□□□□ -0.33
COL27A1-204ENST00000477421 UQCRHLA0A096LP55 91 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 BIN1O00499 593 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.33
COL27A1-204ENST00000477421 F13A1P00488 732 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 UQCRHP07919 91 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 TTC41PQ6P2S7 1318 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 GOLGA8BA8MQT2 603 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 ZNF213O14771 459 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 BEND3Q5T5X7 828 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 DCAF5Q96JK2 942 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 PTH1RQ03431 593 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 VPS53Q5VIR6 699 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 MICU3Q86XE3 530 aa12.96□□□□□ -0.33
COL27A1-204ENST00000477421 RASEFQ8IZ41 740 aa12.96□□□□□ -0.34
COL27A1-204ENST00000477421 C8orf76Q96K31 380 aa12.96□□□□□ -0.34
COL27A1-204ENST00000477421 NAT10Q9H0A0 1025 aaKnown RBP12.96□□□□□ -0.34
COL27A1-204ENST00000477421 TTC12Q9H892 705 aaPredicted RBP12.96□□□□□ -0.34
COL27A1-204ENST00000477421 LMBRD1Q9NUN5 540 aa12.96□□□□□ -0.34
COL27A1-204ENST00000477421 DACT1Q9NYF0 836 aa12.96□□□□□ -0.34
COL27A1-204ENST00000477421 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
COL27A1-204ENST00000477421 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
COL27A1-204ENST00000477421 CLASP1Q7Z460 1538 aa12.95□□□□□ -0.34
COL27A1-204ENST00000477421 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
COL27A1-204ENST00000477421 EXOC5O00471 708 aa12.95□□□□□ -0.34
COL27A1-204ENST00000477421 GCKRQ14397 625 aa12.95□□□□□ -0.34
COL27A1-204ENST00000477421 MCMDC2Q4G0Z9 681 aa12.95□□□□□ -0.34
COL27A1-204ENST00000477421 TMEM63CQ9P1W3 806 aa12.95□□□□□ -0.34
COL27A1-204ENST00000477421 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
COL27A1-204ENST00000477421 NACAP1Q9BZK3 213 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 NAPBQ9H115 298 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 APOBRQ0VD83 1088 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 SEC62Q99442 399 aaKnown RBP12.94□□□□□ -0.34
COL27A1-204ENST00000477421 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
COL27A1-204ENST00000477421 FAM177A1Q8N128 213 aaPredicted RBP12.94□□□□□ -0.34
COL27A1-204ENST00000477421 PAG1Q9NWQ8 432 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 ABCA9Q8IUA7 1624 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 RAD50Q92878 1312 aa12.94□□□□□ -0.34
COL27A1-204ENST00000477421 RUFY3Q7L099 469 aa12.93□□□□□ -0.34
COL27A1-204ENST00000477421 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
COL27A1-204ENST00000477421 ZNF165P49910 485 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms