RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PROSER3Q2NL68 480 aa21.06■□□□□ 0.96
COL1A1-205ENST00000476387 CC2D2BQ6DHV5 1058 aa21.05■□□□□ 0.96
COL1A1-205ENST00000476387 CFAP44Q96MT7 982 aa21.05■□□□□ 0.96
COL1A1-205ENST00000476387 HOXB7P09629 217 aa21.04■□□□□ 0.96
COL1A1-205ENST00000476387 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
COL1A1-205ENST00000476387 DDX21Q9NR30 783 aaKnown RBP eCLIP21.04■□□□□ 0.96
COL1A1-205ENST00000476387 SNED1Q8TER0 1413 aa21.04■□□□□ 0.96
COL1A1-205ENST00000476387 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
COL1A1-205ENST00000476387 ANXA1P04083 346 aa21.03■□□□□ 0.96
COL1A1-205ENST00000476387 GRIPAP1Q4V328 841 aa21.03■□□□□ 0.96
COL1A1-205ENST00000476387 HSP90AB3PQ58FF7 597 aa21.03■□□□□ 0.96
COL1A1-205ENST00000476387 OLFM4Q6UX06 510 aa21.03■□□□□ 0.96
COL1A1-205ENST00000476387 COPS6Q7L5N1 327 aa21.03■□□□□ 0.96
COL1A1-205ENST00000476387 CRAMP1Q96RY5 1269 aa21.03■□□□□ 0.96
COL1A1-205ENST00000476387 PSMD1Q99460 953 aa21.03■□□□□ 0.96
COL1A1-205ENST00000476387 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
COL1A1-205ENST00000476387 ZNF277Q9NRM2 450 aaPredicted RBP21.03■□□□□ 0.96
COL1A1-205ENST00000476387 DDNO94850 711 aaPredicted RBP21.02■□□□□ 0.96
COL1A1-205ENST00000476387 GNAI1P63096 354 aa21.02■□□□□ 0.96
COL1A1-205ENST00000476387 XAGE3Q8WTP9 111 aa21.02■□□□□ 0.96
COL1A1-205ENST00000476387 RBM17Q96I25 401 aaKnown RBP21.02■□□□□ 0.96
COL1A1-205ENST00000476387 L3MBTL3Q96JM7 780 aaPredicted RBP21.02■□□□□ 0.96
COL1A1-205ENST00000476387 IFT57Q9NWB7 429 aa21.02■□□□□ 0.96
COL1A1-205ENST00000476387 ANKRD36CQ5JPF3 1778 aa21.01■□□□□ 0.95
COL1A1-205ENST00000476387 KRT24Q2M2I5 525 aa21.01■□□□□ 0.95
COL1A1-205ENST00000476387 SLC10A5Q5PT55 438 aa21.01■□□□□ 0.95
COL1A1-205ENST00000476387 NECTIN2Q92692 538 aa21.01■□□□□ 0.95
COL1A1-205ENST00000476387 IQCA1LA6NCM1 817 aa21■□□□□ 0.95
COL1A1-205ENST00000476387 IARSP41252 1262 aaKnown RBP21■□□□□ 0.95
COL1A1-205ENST00000476387 SYNE4Q8N205 404 aa21■□□□□ 0.95
COL1A1-205ENST00000476387 NLRP3Q96P20 1036 aa21■□□□□ 0.95
COL1A1-205ENST00000476387 MBIPQ9NS73 344 aa21■□□□□ 0.95
COL1A1-205ENST00000476387 AIMP1Q12904 312 aaKnown RBP20.99■□□□□ 0.95
COL1A1-205ENST00000476387 HDGFL1Q5TGJ6 251 aa20.99■□□□□ 0.95
COL1A1-205ENST00000476387 KLRG1Q96E93 195 aa20.99■□□□□ 0.95
COL1A1-205ENST00000476387 ZNF853P0CG23 659 aa20.98■□□□□ 0.95
COL1A1-205ENST00000476387 HTRA3P83110 453 aa20.98■□□□□ 0.95
COL1A1-205ENST00000476387 TCIRG1Q13488 830 aa20.98■□□□□ 0.95
COL1A1-205ENST00000476387 C3orf67Q6ZVT6 689 aa20.98■□□□□ 0.95
COL1A1-205ENST00000476387 NLRP10Q86W26 655 aa20.98■□□□□ 0.95
COL1A1-205ENST00000476387 CHPF2Q9P2E5 772 aa20.98■□□□□ 0.95
COL1A1-205ENST00000476387 FZD9O00144 591 aa20.97■□□□□ 0.95
COL1A1-205ENST00000476387 DBF4Q9UBU7 674 aaPredicted RBP20.97■□□□□ 0.95
COL1A1-205ENST00000476387 ZNF541Q9H0D2 1346 aa20.97■□□□□ 0.95
COL1A1-205ENST00000476387 SCN4AP35499 1836 aa20.97■□□□□ 0.95
COL1A1-205ENST00000476387 PPEF1O14829 653 aaPredicted RBP20.96■□□□□ 0.95
COL1A1-205ENST00000476387 CCDC27Q2M243 656 aa20.96■□□□□ 0.95
COL1A1-205ENST00000476387 DUSP27Q5VZP5 1158 aa20.96■□□□□ 0.95
COL1A1-205ENST00000476387 CHADLQ6NUI6 762 aa20.96■□□□□ 0.95
COL1A1-205ENST00000476387 JMYQ8N9B5 988 aa20.96■□□□□ 0.95
COL1A1-205ENST00000476387 PLBD2Q8NHP8 589 aa20.96■□□□□ 0.95
COL1A1-205ENST00000476387 FAM9BQ8IZU0 186 aa20.95■□□□□ 0.94
COL1A1-205ENST00000476387 JDP2Q8WYK2 163 aa20.95■□□□□ 0.94
COL1A1-205ENST00000476387 TMX4Q9H1E5 349 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-205ENST00000476387 TAF1DQ9H5J8 278 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-205ENST00000476387 HYPKQ9NX55 129 aa20.94■□□□□ 0.94
COL1A1-205ENST00000476387 TRMT112Q9UI30 125 aaKnown RBP20.94■□□□□ 0.94
COL1A1-205ENST00000476387 SH3TC1Q8TE82 1336 aa20.94■□□□□ 0.94
COL1A1-205ENST00000476387 NCBP3Q53F19 620 aaKnown RBP20.93■□□□□ 0.94
COL1A1-205ENST00000476387 ANKRD13DQ6ZTN6 518 aa20.93■□□□□ 0.94
COL1A1-205ENST00000476387 LDHDQ86WU2 507 aa20.93■□□□□ 0.94
COL1A1-205ENST00000476387 WWC1Q8IX03 1113 aa20.93■□□□□ 0.94
COL1A1-205ENST00000476387 GPC2Q8N158 579 aa20.93■□□□□ 0.94
COL1A1-205ENST00000476387 ATP6V0A2Q9Y487 856 aa20.93■□□□□ 0.94
COL1A1-205ENST00000476387 VPS33BQ9H267 617 aa20.92■□□□□ 0.94
COL1A1-205ENST00000476387 HACL1Q9UJ83 578 aa20.92■□□□□ 0.94
COL1A1-205ENST00000476387 ABCC4O15439 1325 aa20.92■□□□□ 0.94
COL1A1-205ENST00000476387 BBOX1O75936 387 aa20.91■□□□□ 0.94
COL1A1-205ENST00000476387 POTEIP0CG38 1075 aa20.91■□□□□ 0.94
COL1A1-205ENST00000476387 POTEJP0CG39 1038 aa20.91■□□□□ 0.94
COL1A1-205ENST00000476387 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
COL1A1-205ENST00000476387 IL16Q14005 1332 aa20.9■□□□□ 0.94
COL1A1-205ENST00000476387 EIF6P56537 245 aaKnown RBP20.9■□□□□ 0.94
COL1A1-205ENST00000476387 LARGE2Q8N3Y3 721 aa20.9■□□□□ 0.94
COL1A1-205ENST00000476387 ISCA1Q9BUE6 129 aa20.9■□□□□ 0.94
COL1A1-205ENST00000476387 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
COL1A1-205ENST00000476387 COL4A5P29400 1685 aa20.89■□□□□ 0.94
COL1A1-205ENST00000476387 ELL2O00472 640 aaPredicted RBP20.89■□□□□ 0.93
COL1A1-205ENST00000476387 TCERG1O14776 1098 aaKnown RBP20.89■□□□□ 0.93
COL1A1-205ENST00000476387 DDX46Q7L014 1031 aaKnown RBP20.89■□□□□ 0.93
COL1A1-205ENST00000476387 PNMA8AQ86V59 439 aaPredicted RBP20.89■□□□□ 0.93
COL1A1-205ENST00000476387 SALL2Q9Y467 1007 aaPredicted RBP20.89■□□□□ 0.93
COL1A1-205ENST00000476387 LAMB2P55268 1798 aa20.89■□□□□ 0.93
COL1A1-205ENST00000476387 EPHX2P34913 555 aa20.88■□□□□ 0.93
COL1A1-205ENST00000476387 TRIM28Q13263 835 aaKnown RBP20.88■□□□□ 0.93
COL1A1-205ENST00000476387 GRAPQ13588 217 aa20.88■□□□□ 0.93
COL1A1-205ENST00000476387 IFFO2Q5TF58 517 aa20.88■□□□□ 0.93
COL1A1-205ENST00000476387 SLC51AQ86UW1 340 aa20.88■□□□□ 0.93
COL1A1-205ENST00000476387 SP8Q8IXZ3 490 aa20.88■□□□□ 0.93
COL1A1-205ENST00000476387 SUPT20HQ8NEM7 779 aa20.88■□□□□ 0.93
COL1A1-205ENST00000476387 GRAPLQ8TC17 118 aaPredicted RBP20.88■□□□□ 0.93
COL1A1-205ENST00000476387 TSR2Q969E8 191 aaKnown RBP20.88■□□□□ 0.93
COL1A1-205ENST00000476387 RTFDC1Q9BY42 306 aaPredicted RBP20.88■□□□□ 0.93
COL1A1-205ENST00000476387 CREBZFQ9NS37 354 aa20.88■□□□□ 0.93
COL1A1-205ENST00000476387 TMC4Q7Z404 712 aa20.87■□□□□ 0.93
COL1A1-205ENST00000476387 NIM1KQ8IY84 436 aa20.87■□□□□ 0.93
COL1A1-205ENST00000476387 C8orf58Q8NAV2 365 aa20.87■□□□□ 0.93
COL1A1-205ENST00000476387 PASKQ96RG2 1323 aa20.86■□□□□ 0.93
COL1A1-205ENST00000476387 PPIP5K2O43314 1243 aa20.86■□□□□ 0.93
COL1A1-205ENST00000476387 GOLGA2Q08379 1002 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms