RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 SYNE4Q8N205 404 aa9.32□□□□□ -0.92
LSAMP-203ENST00000474851 GPBP1L1Q9HC44 474 aaPredicted RBP9.32□□□□□ -0.92
LSAMP-203ENST00000474851 IL16Q14005 1332 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 KIF3CO14782 793 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 LMNB1P20700 586 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 GTF2E1P29083 439 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-203ENST00000474851 TRIM28Q13263 835 aaKnown RBP9.31□□□□□ -0.92
LSAMP-203ENST00000474851 OLFM4Q6UX06 510 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 PLBD2Q8NHP8 589 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 ZNF526Q8TF50 670 aaPredicted RBP9.31□□□□□ -0.92
LSAMP-203ENST00000474851 TSR2Q969E8 191 aaKnown RBP9.31□□□□□ -0.92
LSAMP-203ENST00000474851 ISCA1Q9BUE6 129 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 UTP14AQ9BVJ6 771 aaKnown RBP9.31□□□□□ -0.92
LSAMP-203ENST00000474851 HYPKQ9NX55 129 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 RNF181Q9P0P0 153 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 ABCC12Q96J65 1359 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 KIAA1551Q9HCM1 1747 aa9.31□□□□□ -0.92
LSAMP-203ENST00000474851 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-203ENST00000474851 HAX1O00165 279 aa9.3□□□□□ -0.92
LSAMP-203ENST00000474851 ALDH1B1P30837 517 aa9.3□□□□□ -0.92
LSAMP-203ENST00000474851 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
LSAMP-203ENST00000474851 PPP1R42Q7Z4L9 355 aa9.3□□□□□ -0.92
LSAMP-203ENST00000474851 WDR63Q8IWG1 891 aa9.3□□□□□ -0.92
LSAMP-203ENST00000474851 FAM9BQ8IZU0 186 aa9.3□□□□□ -0.92
LSAMP-203ENST00000474851 ANP32EQ9BTT0 268 aa9.3□□□□□ -0.92
LSAMP-203ENST00000474851 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
LSAMP-203ENST00000474851 SALL2Q9Y467 1007 aaPredicted RBP9.3□□□□□ -0.92
LSAMP-203ENST00000474851 NRXN2Q9P2S2 1712 aa9.3□□□□□ -0.92
LSAMP-203ENST00000474851 NMRK2Q9NPI5 230 aa9.29□□□□□ -0.92
LSAMP-203ENST00000474851 RTN4Q9NQC3 1192 aaKnown RBP9.29□□□□□ -0.92
LSAMP-203ENST00000474851 LTBP3Q9NS15 1303 aa9.29□□□□□ -0.92
LSAMP-203ENST00000474851 KIF13BQ9NQT8 1826 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 KDM3BQ7LBC6 1761 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 VAMP4O75379 141 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 HCLS1P14317 486 aaPredicted RBP9.28□□□□□ -0.92
LSAMP-203ENST00000474851 SOGA3Q5TF21 947 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 CCDC30Q5VVM6 783 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 SLC51AQ86UW1 340 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 NLRP3Q96P20 1036 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 CRAMP1Q96RY5 1269 aa9.28□□□□□ -0.92
LSAMP-203ENST00000474851 TRMT112Q9UI30 125 aaKnown RBP9.28□□□□□ -0.92
LSAMP-203ENST00000474851 GLTPD2A6NH11 291 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 PITPNM1O00562 1244 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 TCERG1O14776 1098 aaKnown RBP9.27□□□□□ -0.93
LSAMP-203ENST00000474851 CCDC93Q567U6 631 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 RTKN2Q8IZC4 609 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 CHMP4AQ9BY43 222 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 TAOK3Q9H2K8 898 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 RIC1Q4ADV7 1423 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 RNF123Q5XPI4 1314 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 ZNF521Q96K83 1311 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 FANCIQ9NVI1 1328 aa9.27□□□□□ -0.93
LSAMP-203ENST00000474851 ZC3H4Q9UPT8 1303 aaKnown RBP9.27□□□□□ -0.93
LSAMP-203ENST00000474851 SCN7AQ01118 1682 aa9.26□□□□□ -0.93
LSAMP-203ENST00000474851 POTECB2RU33 542 aa9.26□□□□□ -0.93
LSAMP-203ENST00000474851 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
LSAMP-203ENST00000474851 EVX2Q03828 476 aa9.26□□□□□ -0.93
LSAMP-203ENST00000474851 TWISTNBQ3B726 338 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-203ENST00000474851 G2E3Q7L622 706 aa9.26□□□□□ -0.93
LSAMP-203ENST00000474851 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
LSAMP-203ENST00000474851 RPGRQ92834 1020 aaKnown RBP9.26□□□□□ -0.93
LSAMP-203ENST00000474851 FAM89AQ96GI7 184 aa9.26□□□□□ -0.93
LSAMP-203ENST00000474851 RBM17Q96I25 401 aaKnown RBP9.26□□□□□ -0.93
LSAMP-203ENST00000474851 METTL22Q9BUU2 404 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-203ENST00000474851 RRAGCQ9HB90 399 aa9.26□□□□□ -0.93
LSAMP-203ENST00000474851 ZNF277Q9NRM2 450 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-203ENST00000474851 SH3TC1Q8TE82 1336 aa9.26□□□□□ -0.93
LSAMP-203ENST00000474851 N4BP2Q86UW6 1770 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-203ENST00000474851 SNED1Q8TER0 1413 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 PI4KAP2A4QPH2 592 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 BBOX1O75936 387 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 TOMM70O94826 608 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 IGKV5-2P06315 115 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 EXOSC9Q06265 439 aaKnown RBP9.25□□□□□ -0.93
LSAMP-203ENST00000474851 GOLGA2Q08379 1002 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 SF3B3Q15393 1217 aaKnown RBP9.25□□□□□ -0.93
LSAMP-203ENST00000474851 CC2D2BQ6DHV5 1058 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 KSR2Q6VAB6 950 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 PI4KAP1Q8N8J0 262 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 PSMD1Q99460 953 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 ATP6V0A2Q9Y487 856 aa9.25□□□□□ -0.93
LSAMP-203ENST00000474851 MKRN4PQ13434 485 aaPredicted RBP9.24□□□□□ -0.93
LSAMP-203ENST00000474851 ZBTB38Q8NAP3 1195 aaPredicted RBP9.24□□□□□ -0.93
LSAMP-203ENST00000474851 CCDC191Q8NCU4 936 aa9.24□□□□□ -0.93
LSAMP-203ENST00000474851 MYD88Q99836 296 aa9.24□□□□□ -0.93
LSAMP-203ENST00000474851 MAP3K2Q9Y2U5 619 aa9.24□□□□□ -0.93
LSAMP-203ENST00000474851 ABCC4O15439 1325 aa9.24□□□□□ -0.93
LSAMP-203ENST00000474851 KDM2BQ8NHM5 1336 aa9.24□□□□□ -0.93
LSAMP-203ENST00000474851 DLG5Q8TDM6 1919 aa9.23□□□□□ -0.93
LSAMP-203ENST00000474851 CCER2I3L3R5 266 aa9.23□□□□□ -0.93
LSAMP-203ENST00000474851 IRS4O14654 1257 aaPredicted RBP9.23□□□□□ -0.93
LSAMP-203ENST00000474851 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
LSAMP-203ENST00000474851 DDX58O95786 925 aaKnown RBP9.23□□□□□ -0.93
LSAMP-203ENST00000474851 GRIPAP1Q4V328 841 aa9.23□□□□□ -0.93
LSAMP-203ENST00000474851 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
LSAMP-203ENST00000474851 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
LSAMP-203ENST00000474851 SP8Q8IXZ3 490 aa9.23□□□□□ -0.93
LSAMP-203ENST00000474851 JARID2Q92833 1246 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms