RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	LSG1	Q9H089	658 aa	Known RBP	12.82	□□□□□ -0.36
LSS-208	ENST00000474319	PYCARD	Q9ULZ3	195 aa		12.82	□□□□□ -0.36
LSS-208	ENST00000474319	CDC42BPG	Q6DT37	1551 aa		12.82	□□□□□ -0.36
LSS-208	ENST00000474319	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.81	□□□□□ -0.36
LSS-208	ENST00000474319	RAD50	Q92878	1312 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	SALL3	Q9BXA9	1300 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	CSPP1	Q1MSJ5	1256 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	ARHGEF25	Q86VW2	580 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	DNAJC2	Q99543	621 aa	Known RBP	12.81	□□□□□ -0.36
LSS-208	ENST00000474319	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.81	□□□□□ -0.36
LSS-208	ENST00000474319	CYP46A1	Q9Y6A2	500 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	LIG1	P18858	919 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	GUCY1B3	Q02153	619 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	LRMP	Q12912	555 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	CCDC129	Q6ZRS4	1044 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	DHX37	Q8IY37	1157 aa	Known RBP	12.81	□□□□□ -0.36
LSS-208	ENST00000474319	BICD2	Q8TD16	824 aa		12.81	□□□□□ -0.36
LSS-208	ENST00000474319	RBM8A	Q9Y5S9	174 aa	Known RBP	12.81	□□□□□ -0.36
LSS-208	ENST00000474319	KIF24	Q5T7B8	1368 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	NPHP1	O15259	732 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	TAT	P17735	454 aa	Predicted RBP	12.8	□□□□□ -0.36
LSS-208	ENST00000474319	PTGS1	P23219	599 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	NMI	Q13287	307 aa	Predicted RBP	12.8	□□□□□ -0.36
LSS-208	ENST00000474319	SSH3	Q8TE77	659 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	RGPD8	O14715	1765 aa	Predicted RBP	12.8	□□□□□ -0.36
LSS-208	ENST00000474319	ZKSCAN1	P17029	563 aa	Predicted RBP	12.8	□□□□□ -0.36
LSS-208	ENST00000474319	INTS4	Q96HW7	963 aa	Known RBP	12.8	□□□□□ -0.36
LSS-208	ENST00000474319	TPCN1	Q9ULQ1	816 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	OVOS2	A0A0J9YW53	1432 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	OVOS2	Q6IE36	1432 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	RAB11FIP4	Q86YS3	637 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	NFATC2IP	Q8NCF5	419 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	C16orf45	Q96MC5	204 aa	Predicted RBP	12.8	□□□□□ -0.36
LSS-208	ENST00000474319	NRBP1	Q9UHY1	535 aa		12.8	□□□□□ -0.36
LSS-208	ENST00000474319	JAK2	O60674	1132 aa		12.79	□□□□□ -0.36
LSS-208	ENST00000474319	ANAPC15	P60006	121 aa		12.79	□□□□□ -0.36
LSS-208	ENST00000474319	UBE2H	P62256	183 aa		12.79	□□□□□ -0.36
LSS-208	ENST00000474319	HYPK	Q9NX55	129 aa		12.79	□□□□□ -0.36
LSS-208	ENST00000474319	DACT1	Q9NYF0	836 aa		12.79	□□□□□ -0.36
LSS-208	ENST00000474319	MTMR6	Q9Y217	621 aa		12.79	□□□□□ -0.36
LSS-208	ENST00000474319	STAP2	Q9UGK3	403 aa		12.79	□□□□□ -0.36
LSS-208	ENST00000474319	TCHH	Q07283	1943 aa		12.78	□□□□□ -0.36
LSS-208	ENST00000474319		A0A0D9SFI3	127 aa		12.78	□□□□□ -0.36
LSS-208	ENST00000474319	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
LSS-208	ENST00000474319	CHST3	Q7LGC8	479 aa		12.78	□□□□□ -0.36
LSS-208	ENST00000474319	TRIM5	Q9C035	493 aa		12.78	□□□□□ -0.36
LSS-208	ENST00000474319	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	5e-6	■□□□□ 9.5
LSS-208	ENST00000474319	C1orf167	Q5SNV9	1468 aa		12.78	□□□□□ -0.36
LSS-208	ENST00000474319	TTC6	Q86TZ1	520 aa		12.78	□□□□□ -0.36
LSS-208	ENST00000474319	SEC62	Q99442	399 aa	Known RBP	12.78	□□□□□ -0.36
LSS-208	ENST00000474319	ECHDC1	Q9NTX5	307 aa		12.78	□□□□□ -0.36
LSS-208	ENST00000474319	GLRX3	O76003	335 aa	Known RBP	12.77	□□□□□ -0.36
LSS-208	ENST00000474319	NAA30	Q147X3	362 aa	Predicted RBP	12.77	□□□□□ -0.36
LSS-208	ENST00000474319	BEND3	Q5T5X7	828 aa		12.77	□□□□□ -0.36
LSS-208	ENST00000474319	LARP1	Q6PKG0	1096 aa	Known RBP	12.77	□□□□□ -0.36
LSS-208	ENST00000474319	BTG4	Q9NY30	223 aa		12.77	□□□□□ -0.36
LSS-208	ENST00000474319	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.77	□□□□□ -0.36
LSS-208	ENST00000474319		V9GYY5	206 aa	Predicted RBP	12.77	□□□□□ -0.36
LSS-208	ENST00000474319	LMTK3	Q96Q04	1460 aa		12.77	□□□□□ -0.36
LSS-208	ENST00000474319	MAP3K5	Q99683	1374 aa		12.77	□□□□□ -0.36
LSS-208	ENST00000474319	ATP5J2-PTCD1	G3V325	749 aa		12.77	□□□□□ -0.36
LSS-208	ENST00000474319	HS1BP3	Q53T59	392 aa		12.77	□□□□□ -0.36
LSS-208	ENST00000474319	RIC3	Q7Z5B4	369 aa		12.77	□□□□□ -0.36
LSS-208	ENST00000474319	EAF2	Q96CJ1	260 aa	Predicted RBP	12.77	□□□□□ -0.36
LSS-208	ENST00000474319	IGSF1	Q8N6C5	1336 aa		12.77	□□□□□ -0.37
LSS-208	ENST00000474319	UBAP1L	F5GYI3	381 aa		12.77	□□□□□ -0.37
LSS-208	ENST00000474319	PPP4R3B	Q5MIZ7	849 aa		12.77	□□□□□ -0.37
LSS-208	ENST00000474319	CREB3L3	Q68CJ9	461 aa		12.77	□□□□□ -0.37
LSS-208	ENST00000474319	BICC1	Q9H694	974 aa	Known RBP	12.77	□□□□□ -0.37
LSS-208	ENST00000474319	EIF4A1	P60842	406 aa	Known RBP	12.76	□□□□□ -0.37
LSS-208	ENST00000474319	CCDC186	Q7Z3E2	898 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.76	□□□□□ -0.37
LSS-208	ENST00000474319	ZBTB9	Q96C00	473 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	TTC14	Q96N46	770 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.76	□□□□□ -0.37
LSS-208	ENST00000474319	ANO6	Q4KMQ2	910 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	TTC5	Q8N0Z6	440 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	RUFY2	Q8WXA3	655 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	SUCLG2	Q96I99	432 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	TNMD	Q9H2S6	317 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	ST3GAL1	Q11201	340 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	SPATA32	Q96LK8	384 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319	DNAJC25	Q9H1X3	360 aa		12.76	□□□□□ -0.37
LSS-208	ENST00000474319		H3BQV1	296 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	CCT2	P78371	535 aa	Known RBP	12.75	□□□□□ -0.37
LSS-208	ENST00000474319	IFFO2	Q5TF58	517 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	BLOC1S2	Q6QNY1	142 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	DDX46	Q7L014	1031 aa	Known RBP	12.75	□□□□□ -0.37
LSS-208	ENST00000474319	GPATCH3	Q96I76	525 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	NUP62CL	Q9H1M0	184 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	ATP6V1D	Q9Y5K8	247 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	ANKRD26	Q9UPS8	1709 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	HOMEZ	Q8IX15	550 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	NEUROD6	Q96NK8	337 aa		12.75	□□□□□ -0.37
LSS-208	ENST00000474319	SETD1A	O15047	1707 aa	Known RBP	12.75	□□□□□ -0.37
LSS-208	ENST00000474319	DYNC1I1	O14576	645 aa		12.74	□□□□□ -0.37
LSS-208	ENST00000474319	CCDC192	P0DO97	292 aa		12.74	□□□□□ -0.37
LSS-208	ENST00000474319	CABP4	P57796	275 aa		12.74	□□□□□ -0.37
LSS-208	ENST00000474319	STK11IP	Q8N1F8	1099 aa		12.74	□□□□□ -0.37
LSS-208	ENST00000474319	FMNL2	Q96PY5	1086 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms