RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 H7C1W4 665 aa7.65□□□□□ -1.19
CLK1-210ENST00000473565 RFX5P48382 616 aaPredicted RBP7.65□□□□□ -1.19
CLK1-210ENST00000473565 FOXO4P98177 505 aa7.65□□□□□ -1.19
CLK1-210ENST00000473565 TEX13AQ9BXU3 409 aaPredicted RBP7.65□□□□□ -1.19
CLK1-210ENST00000473565 IL25Q9H293 177 aa7.65□□□□□ -1.19
CLK1-210ENST00000473565 STAP2Q9UGK3 403 aa7.65□□□□□ -1.19
CLK1-210ENST00000473565 LOC102724428A0A0B4J2F2 783 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 FAM177BA6PVY3 158 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 SIK1P57059 783 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 PTPN12Q05209 780 aaKnown RBP7.64□□□□□ -1.19
CLK1-210ENST00000473565 TCIRG1Q13488 830 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 CLASRPQ8N2M8 674 aaKnown RBP7.64□□□□□ -1.19
CLK1-210ENST00000473565 FNBP4Q8N3X1 1017 aaPredicted RBP7.64□□□□□ -1.19
CLK1-210ENST00000473565 KIF2CQ99661 725 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 SLKQ9H2G2 1235 aaPredicted RBP7.64□□□□□ -1.19
CLK1-210ENST00000473565 HSP90AB4PQ58FF6 505 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 ISCA1Q9BUE6 129 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 MYH14Q7Z406 1995 aaKnown RBP7.64□□□□□ -1.19
CLK1-210ENST00000473565 PALLDQ8WX93 1383 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 MAP3K15Q6ZN16 1313 aa7.64□□□□□ -1.19
CLK1-210ENST00000473565 IFIT2P09913 472 aaKnown RBP7.63□□□□□ -1.19
CLK1-210ENST00000473565 RABL6Q3YEC7 729 aaPredicted RBP7.63□□□□□ -1.19
CLK1-210ENST00000473565 HDAC5Q9UQL6 1122 aa7.63□□□□□ -1.19
CLK1-210ENST00000473565 AFF2P51816 1311 aa7.63□□□□□ -1.19
CLK1-210ENST00000473565 CD2BP2O95400 341 aaKnown RBP7.63□□□□□ -1.19
CLK1-210ENST00000473565 CRKLP46109 303 aaKnown RBP7.63□□□□□ -1.19
CLK1-210ENST00000473565 RBM25P49756 843 aaKnown RBP7.63□□□□□ -1.19
CLK1-210ENST00000473565 TFCP2Q12800 502 aa7.63□□□□□ -1.19
CLK1-210ENST00000473565 INTS5Q6P9B9 1019 aaKnown RBP7.63□□□□□ -1.19
CLK1-210ENST00000473565 DZIP3Q86Y13 1208 aaKnown RBP7.63□□□□□ -1.19
CLK1-210ENST00000473565 CCDC191Q8NCU4 936 aa7.63□□□□□ -1.19
CLK1-210ENST00000473565 NDUFB9Q9Y6M9 179 aa7.63□□□□□ -1.19
CLK1-210ENST00000473565 AK9Q5TCS8 1911 aa7.63□□□□□ -1.19
CLK1-210ENST00000473565 CHMLP26374 656 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 LRRC24Q50LG9 513 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 GIGYF2Q6Y7W6 1299 aaKnown RBP7.62□□□□□ -1.19
CLK1-210ENST00000473565 ERC1Q8IUD2 1116 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 USP26Q9BXU7 913 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 PUS3Q9BZE2 481 aaKnown RBP7.62□□□□□ -1.19
CLK1-210ENST00000473565 COPRSQ9NQ92 184 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 NUP98P52948 1817 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 SPATA31A6Q5VVP1 1343 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 CASC1Q6TDU7 716 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 NLRP10Q86W26 655 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 EDC3Q96F86 508 aaKnown RBP7.62□□□□□ -1.19
CLK1-210ENST00000473565 CCDC87Q9NVE4 849 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 UBN2Q6ZU65 1347 aa7.62□□□□□ -1.19
CLK1-210ENST00000473565 ERC2O15083 957 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 BECN1Q14457 450 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 BOLA2Q9H3K6 86 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 ECHDC1Q9NTX5 307 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 IL6STP40189 918 aaPredicted RBP7.61□□□□□ -1.19
CLK1-210ENST00000473565 EIF5P55010 431 aaKnown RBP7.61□□□□□ -1.19
CLK1-210ENST00000473565 LINC00116Q8NCU8 138 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 ANO2Q9NQ90 1003 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 GJD4Q96KN9 370 aaPredicted RBP7.61□□□□□ -1.19
CLK1-210ENST00000473565 DBNDD2Q9BQY9 259 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 FOXD4L1Q9NU39 408 aa7.61□□□□□ -1.19
CLK1-210ENST00000473565 TRMT112Q9UI30 125 aaKnown RBP7.61□□□□□ -1.19
CLK1-210ENST00000473565 DBNLQ9UJU6 430 aaKnown RBP7.61□□□□□ -1.19
CLK1-210ENST00000473565 CHGBP05060 677 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 TNNI3KQ59H18 835 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 CWC27Q6UX04 472 aaKnown RBP7.6□□□□□ -1.19
CLK1-210ENST00000473565 ATG9AQ7Z3C6 839 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 FPGT-TNNI3KV9GXZ4 949 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 AOX1Q06278 1338 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 GLRX3O76003 335 aaKnown RBP7.6□□□□□ -1.19
CLK1-210ENST00000473565 TIMM10P62072 90 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 PALD1Q9ULE6 856 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 TTC41PQ6P2S7 1318 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 USP42Q9H9J4 1324 aaKnown RBP7.6□□□□□ -1.19
CLK1-210ENST00000473565 COL15A1P39059 1388 aa7.6□□□□□ -1.19
CLK1-210ENST00000473565 PCCAP05165 728 aaPredicted RBP7.59□□□□□ -1.19
CLK1-210ENST00000473565 CNTROBQ8N137 903 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 ZBTB38Q8NAP3 1195 aaPredicted RBP7.59□□□□□ -1.19
CLK1-210ENST00000473565 NEUROD6Q96NK8 337 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 ANKRD36CQ5JPF3 1778 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 IRS4O14654 1257 aaPredicted RBP7.59□□□□□ -1.19
CLK1-210ENST00000473565 HCLS1P14317 486 aaPredicted RBP7.59□□□□□ -1.19
CLK1-210ENST00000473565 TRIM28Q13263 835 aaKnown RBP7.59□□□□□ -1.19
CLK1-210ENST00000473565 GREM2Q9H772 168 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 BTAF1O14981 1849 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 REC8O95072 547 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 SUSD4Q5VX71 490 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 AMIGO3Q86WK7 504 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 HSCBQ8IWL3 235 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 SEPT12Q8IYM1 358 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 GPATCH3Q96I76 525 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 THSD7AQ9UPZ6 1657 aa7.59□□□□□ -1.19
CLK1-210ENST00000473565 CAMTA2O94983 1202 aa7.58□□□□□ -1.2
CLK1-210ENST00000473565 CCDC57Q2TAC2 916 aa7.58□□□□□ -1.2
CLK1-210ENST00000473565 SMARCC1Q92922 1105 aaPredicted RBP7.58□□□□□ -1.2
CLK1-210ENST00000473565 EYA2O00167 538 aa7.58□□□□□ -1.2
CLK1-210ENST00000473565 TAF7LQ5H9L4 462 aa7.58□□□□□ -1.2
CLK1-210ENST00000473565 BICDL1Q6ZP65 573 aa7.58□□□□□ -1.2
CLK1-210ENST00000473565 ZNF34Q8IZ26 560 aa7.58□□□□□ -1.2
CLK1-210ENST00000473565 TTLL11Q8NHH1 800 aa7.58□□□□□ -1.2
CLK1-210ENST00000473565 FAM227BQ96M60 508 aa7.58□□□□□ -1.2
CLK1-210ENST00000473565 DNAJC2Q99543 621 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms