RNA–Protein interactions for RNA: ENST00000473243.5

ATP13A1-207, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-207ENST00000473243 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
ATP13A1-207ENST00000473243 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
ATP13A1-207ENST00000473243 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
ATP13A1-207ENST00000473243 TFCP2Q12800 502 aa17.32■□□□□ 0.36
ATP13A1-207ENST00000473243 IKQ13123 557 aaPredicted RBP17.32■□□□□ 0.36
ATP13A1-207ENST00000473243 A1BGP04217 495 aa17.32■□□□□ 0.36
ATP13A1-207ENST00000473243 TPM2P07951 284 aa17.32■□□□□ 0.36
ATP13A1-207ENST00000473243 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
ATP13A1-207ENST00000473243 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
ATP13A1-207ENST00000473243 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
ATP13A1-207ENST00000473243 NMIQ13287 307 aaPredicted RBP17.31■□□□□ 0.36
ATP13A1-207ENST00000473243 TTF1Q15361 905 aaPredicted RBP17.31■□□□□ 0.36
ATP13A1-207ENST00000473243 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
ATP13A1-207ENST00000473243 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
ATP13A1-207ENST00000473243 CTDP1Q9Y5B0 961 aaPredicted RBP17.31■□□□□ 0.36
ATP13A1-207ENST00000473243 TMEM94Q12767 1356 aa17.31■□□□□ 0.36
ATP13A1-207ENST00000473243 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 NECAB1Q8N987 351 aa17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 ADGRB3O60242 1522 aa17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 PPFIA3O75145 1194 aa17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 CCDC82Q8N4S0 544 aa17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 GLI2P10070 1586 aa17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 PLBD2Q8NHP8 589 aa17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 PCMTD1Q96MG8 357 aaPredicted RBP17.3■□□□□ 0.36
ATP13A1-207ENST00000473243 CEP152O94986 1710 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 ZNF853P0CG23 659 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 MCMDC2Q4G0Z9 681 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 SPC24Q8NBT2 197 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 HMGN5P82970 282 aaKnown RBP17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 PIBF1Q8WXW3 757 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 BRF1Q92994 677 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 TFIP11Q9UBB9 837 aaKnown RBP17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 RBM25P49756 843 aaKnown RBP17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 CCDC152Q4G0S7 254 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 NIP7Q9Y221 180 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 CAMK4Q16566 473 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 LRRC2Q9BYS8 371 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 LMTK2Q8IWU2 1503 aa17.29■□□□□ 0.36
ATP13A1-207ENST00000473243 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 ABCA6Q8N139 1617 aa17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 ALKQ9UM73 1620 aa17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 NPHP4O75161 1426 aaPredicted RBP17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 GOLGA8BA8MQT2 603 aa17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 PAG1Q9NWQ8 432 aa17.28■□□□□ 0.36
ATP13A1-207ENST00000473243 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.36
ATP13A1-207ENST00000473243 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.36
ATP13A1-207ENST00000473243 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
ATP13A1-207ENST00000473243 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
ATP13A1-207ENST00000473243 TIMM10P62072 90 aa17.27■□□□□ 0.36
ATP13A1-207ENST00000473243 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
ATP13A1-207ENST00000473243 IQSEC3Q9UPP2 1182 aaPredicted RBP17.27■□□□□ 0.36
ATP13A1-207ENST00000473243 KIF24Q5T7B8 1368 aa17.27■□□□□ 0.35
ATP13A1-207ENST00000473243 RANBP6O60518 1105 aaKnown RBP17.27■□□□□ 0.35
ATP13A1-207ENST00000473243 SMC2O95347 1197 aa17.27■□□□□ 0.35
ATP13A1-207ENST00000473243 UQCRFS1P1P0C7P4 283 aa17.27■□□□□ 0.35
ATP13A1-207ENST00000473243 PHKG2P15735 406 aa17.27■□□□□ 0.35
ATP13A1-207ENST00000473243 RBM5P52756 815 aaKnown RBP eCLIP17.27■□□□□ 0.35
ATP13A1-207ENST00000473243 GCKRQ14397 625 aa17.27■□□□□ 0.35
ATP13A1-207ENST00000473243 ZFYP08048 801 aaPredicted RBP17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 USP5P45974 858 aa17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 NBPF5PQ86XG9 351 aaPredicted RBP17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 WASF1Q92558 559 aa17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 HELBQ8NG08 1087 aaPredicted RBP17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 AK7Q96M32 723 aa17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 CCAR2Q8N163 923 aaKnown RBP17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 ZGPATQ8N5A5 531 aaKnown RBP17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
ATP13A1-207ENST00000473243 RFC4P35249 363 aa17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 RAB11FIP4Q86YS3 637 aa17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 SLC12A7Q9Y666 1083 aa17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 PPRC1Q5VV67 1664 aaKnown RBP17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 CDK12Q9NYV4 1490 aaPredicted RBP17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 TXLNAP40222 546 aa17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 TCEAL9Q9UHQ7 104 aa17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 SLC9C2Q5TAH2 1124 aa17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 PPP1R1BQ9UD71 204 aaPredicted RBP17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 NCOA7Q8NI08 942 aa17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 RPGRQ92834 1020 aaKnown RBP17.25■□□□□ 0.35
ATP13A1-207ENST00000473243 PDILTQ8N807 584 aa17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 R3HCC1Q9Y3T6 440 aaKnown RBP17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 IPO7O95373 1038 aaKnown RBP17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 KLHL40Q2TBA0 621 aa17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 RNF41Q9H4P4 317 aaPredicted RBP17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 FAM13BQ9NYF5 915 aa17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 IQCA1Q86XH1 822 aa17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
ATP13A1-207ENST00000473243 DNAJC10Q8IXB1 793 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms