RNA–Protein interactions for RNA: ENST00000471991.5

SFPQ-207, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 440 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-207ENST00000471991 NMRK2Q9NPI5 230 aa18.13■□□□□ 0.49
SFPQ-207ENST00000471991 DDX60Q8IY21 1712 aaKnown RBP18.12■□□□□ 0.49
SFPQ-207ENST00000471991 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
SFPQ-207ENST00000471991 CCDC93Q567U6 631 aa18.12■□□□□ 0.49
SFPQ-207ENST00000471991 RNF123Q5XPI4 1314 aa18.12■□□□□ 0.49
SFPQ-207ENST00000471991 C7orf43Q8WVR3 580 aa18.11■□□□□ 0.49
SFPQ-207ENST00000471991 UTP14AQ9BVJ6 771 aaKnown RBP18.11■□□□□ 0.49
SFPQ-207ENST00000471991 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
SFPQ-207ENST00000471991 WDR90Q96KV7 1748 aa18.1■□□□□ 0.49
SFPQ-207ENST00000471991 PLBD2Q8NHP8 589 aa18.1■□□□□ 0.49
SFPQ-207ENST00000471991 RPGRQ92834 1020 aaKnown RBP18.1■□□□□ 0.49
SFPQ-207ENST00000471991 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
SFPQ-207ENST00000471991 TOMM70O94826 608 aa18.09■□□□□ 0.49
SFPQ-207ENST00000471991 TCIRG1Q13488 830 aa18.09■□□□□ 0.49
SFPQ-207ENST00000471991 NLRP10Q86W26 655 aa18.09■□□□□ 0.49
SFPQ-207ENST00000471991 HOXA10P31260 410 aaPredicted RBP18.08■□□□□ 0.48
SFPQ-207ENST00000471991 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
SFPQ-207ENST00000471991 ANKRD13DQ6ZTN6 518 aa18.08■□□□□ 0.48
SFPQ-207ENST00000471991 WWC1Q8IX03 1113 aa18.08■□□□□ 0.48
SFPQ-207ENST00000471991 C8orf58Q8NAV2 365 aa18.08■□□□□ 0.48
SFPQ-207ENST00000471991 GLTPD2A6NH11 291 aa18.07■□□□□ 0.48
SFPQ-207ENST00000471991 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
SFPQ-207ENST00000471991 SLC10A5Q5PT55 438 aa18.07■□□□□ 0.48
SFPQ-207ENST00000471991 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
SFPQ-207ENST00000471991 RTKN2Q8IZC4 609 aa18.07■□□□□ 0.48
SFPQ-207ENST00000471991 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
SFPQ-207ENST00000471991 NLRP3Q96P20 1036 aa18.07■□□□□ 0.48
SFPQ-207ENST00000471991 SNED1Q8TER0 1413 aa18.06■□□□□ 0.48
SFPQ-207ENST00000471991 OLFM4Q6UX06 510 aa18.06■□□□□ 0.48
SFPQ-207ENST00000471991 C3orf67Q6ZVT6 689 aa18.06■□□□□ 0.48
SFPQ-207ENST00000471991 TSR2Q969E8 191 aaKnown RBP18.06■□□□□ 0.48
SFPQ-207ENST00000471991 CRAMP1Q96RY5 1269 aa18.06■□□□□ 0.48
SFPQ-207ENST00000471991 CHMP4AQ9BY43 222 aa18.06■□□□□ 0.48
SFPQ-207ENST00000471991 RRAGCQ9HB90 399 aa18.06■□□□□ 0.48
SFPQ-207ENST00000471991 TRMT112Q9UI30 125 aaKnown RBP18.06■□□□□ 0.48
SFPQ-207ENST00000471991 IL16Q14005 1332 aa18.05■□□□□ 0.48
SFPQ-207ENST00000471991 SH3TC1Q8TE82 1336 aa18.05■□□□□ 0.48
SFPQ-207ENST00000471991 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
SFPQ-207ENST00000471991 TAF1P21675 1872 aa18.05■□□□□ 0.48
SFPQ-207ENST00000471991 CACNA1FO60840 1977 aa18.04■□□□□ 0.48
SFPQ-207ENST00000471991 HSPA6P17066 643 aa18.04■□□□□ 0.48
SFPQ-207ENST00000471991 CCDC30Q5VVM6 783 aa18.04■□□□□ 0.48
SFPQ-207ENST00000471991 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
SFPQ-207ENST00000471991 DPY19L2Q6NUT2 758 aa18.04■□□□□ 0.48
SFPQ-207ENST00000471991 RBM46Q8TBY0 533 aaKnown RBP18.04■□□□□ 0.48
SFPQ-207ENST00000471991 ISCA1Q9BUE6 129 aa18.04■□□□□ 0.48
SFPQ-207ENST00000471991 PHAXQ9H814 394 aaKnown RBP18.04■□□□□ 0.48
SFPQ-207ENST00000471991 PPEF1O14829 653 aaPredicted RBP18.03■□□□□ 0.48
SFPQ-207ENST00000471991 RIC3Q7Z5B4 369 aa18.03■□□□□ 0.48
SFPQ-207ENST00000471991 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
SFPQ-207ENST00000471991 LRRC37AA6NMS7 1700 aa18.03■□□□□ 0.48
SFPQ-207ENST00000471991 SCN4AP35499 1836 aa18.02■□□□□ 0.48
SFPQ-207ENST00000471991 ABCC4O15439 1325 aa18.02■□□□□ 0.48
SFPQ-207ENST00000471991 ATP5J2-PTCD1G3V325 749 aa18.02■□□□□ 0.48
SFPQ-207ENST00000471991 HCLS1P14317 486 aaPredicted RBP18.02■□□□□ 0.48
SFPQ-207ENST00000471991 FAM9BQ8IZU0 186 aa18.02■□□□□ 0.48
SFPQ-207ENST00000471991 SYNE4Q8N205 404 aa18.02■□□□□ 0.48
SFPQ-207ENST00000471991 PSMD1Q99460 953 aa18.02■□□□□ 0.48
SFPQ-207ENST00000471991 ZNF277Q9NRM2 450 aaPredicted RBP18.02■□□□□ 0.48
SFPQ-207ENST00000471991 VEGFAP15692 232 aaPredicted RBP18.01■□□□□ 0.47
SFPQ-207ENST00000471991 IARSP41252 1262 aaKnown RBP18.01■□□□□ 0.47
SFPQ-207ENST00000471991 TWISTNBQ3B726 338 aaPredicted RBP18.01■□□□□ 0.47
SFPQ-207ENST00000471991 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
SFPQ-207ENST00000471991 ZNF428Q96B54 188 aa18.01■□□□□ 0.47
SFPQ-207ENST00000471991 SALL2Q9Y467 1007 aaPredicted RBP18.01■□□□□ 0.47
SFPQ-207ENST00000471991 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
SFPQ-207ENST00000471991 DDX58O95786 925 aaKnown RBP18■□□□□ 0.47
SFPQ-207ENST00000471991 STK31Q9BXU1 1019 aa18■□□□□ 0.47
SFPQ-207ENST00000471991 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
SFPQ-207ENST00000471991 FSTL1Q12841 308 aa17.99■□□□□ 0.47
SFPQ-207ENST00000471991 TRIM28Q13263 835 aaKnown RBP17.99■□□□□ 0.47
SFPQ-207ENST00000471991 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
SFPQ-207ENST00000471991 FAM89AQ96GI7 184 aa17.99■□□□□ 0.47
SFPQ-207ENST00000471991 MYD88Q99836 296 aa17.99■□□□□ 0.47
SFPQ-207ENST00000471991 TMX4Q9H1E5 349 aaPredicted RBP17.99■□□□□ 0.47
SFPQ-207ENST00000471991 MYH3P11055 1940 aa17.98■□□□□ 0.47
SFPQ-207ENST00000471991 DDNO94850 711 aaPredicted RBP17.98■□□□□ 0.47
SFPQ-207ENST00000471991 DDX46Q7L014 1031 aaKnown RBP17.98■□□□□ 0.47
SFPQ-207ENST00000471991 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
SFPQ-207ENST00000471991 ATP6V0A2Q9Y487 856 aa17.98■□□□□ 0.47
SFPQ-207ENST00000471991 COL4A5P29400 1685 aa17.98■□□□□ 0.47
SFPQ-207ENST00000471991 SMC1BQ8NDV3 1235 aa17.97■□□□□ 0.47
SFPQ-207ENST00000471991 ZNF541Q9H0D2 1346 aa17.97■□□□□ 0.47
SFPQ-207ENST00000471991 POTECB2RU33 542 aa17.96■□□□□ 0.47
SFPQ-207ENST00000471991 BBOX1O75936 387 aa17.96■□□□□ 0.47
SFPQ-207ENST00000471991 APLP1P51693 650 aa17.96■□□□□ 0.47
SFPQ-207ENST00000471991 GRAPQ13588 217 aa17.96■□□□□ 0.47
SFPQ-207ENST00000471991 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
SFPQ-207ENST00000471991 GRAPLQ8TC17 118 aaPredicted RBP17.96■□□□□ 0.47
SFPQ-207ENST00000471991 JDP2Q8WYK2 163 aa17.96■□□□□ 0.47
SFPQ-207ENST00000471991 METTL22Q9BUU2 404 aaPredicted RBP17.96■□□□□ 0.47
SFPQ-207ENST00000471991 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
SFPQ-207ENST00000471991 ZBTB38Q8NAP3 1195 aaPredicted RBP17.95■□□□□ 0.46
SFPQ-207ENST00000471991 CCDC191Q8NCU4 936 aa17.95■□□□□ 0.46
SFPQ-207ENST00000471991 MAP3K2Q9Y2U5 619 aa17.95■□□□□ 0.46
SFPQ-207ENST00000471991 COL4A1P02462 1669 aa17.95■□□□□ 0.46
SFPQ-207ENST00000471991 DUOX1Q9NRD9 1551 aa17.95■□□□□ 0.46
SFPQ-207ENST00000471991 FZD9O00144 591 aa17.94■□□□□ 0.46
SFPQ-207ENST00000471991 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
SFPQ-207ENST00000471991 KSR2Q6VAB6 950 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms