RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RFX1P22670 979 aa10.1□□□□□ -0.79
CD46-213ENST00000471987 IER5Q5VY09 327 aa10.1□□□□□ -0.79
CD46-213ENST00000471987 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
CD46-213ENST00000471987 TNFRSF25Q93038 417 aa10.1□□□□□ -0.79
CD46-213ENST00000471987 MDFIQ99750 246 aa10.1□□□□□ -0.79
CD46-213ENST00000471987 SPOCK3Q9BQ16 436 aa10.1□□□□□ -0.79
CD46-213ENST00000471987 TGFBR3LH3BV60 316 aa10.08□□□□□ -0.8
CD46-213ENST00000471987 WEE1P30291 646 aa10.08□□□□□ -0.8
CD46-213ENST00000471987 FOXO3O43524 673 aa10.07□□□□□ -0.8
CD46-213ENST00000471987 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
CD46-213ENST00000471987 RAB44Q7Z6P3 723 aaPredicted RBP10.07□□□□□ -0.8
CD46-213ENST00000471987 VTI1AQ96AJ9 217 aa10.07□□□□□ -0.8
CD46-213ENST00000471987 EFCC1Q9HA90 598 aa10.07□□□□□ -0.8
CD46-213ENST00000471987 PROCP04070 461 aa10.06□□□□□ -0.8
CD46-213ENST00000471987 ADH7P40394 386 aa10.05□□□□□ -0.8
CD46-213ENST00000471987 BHMTQ93088 406 aa10.05□□□□□ -0.8
CD46-213ENST00000471987 NOVA2Q9UNW9 492 aaKnown RBP10.05□□□□□ -0.8
CD46-213ENST00000471987 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
CD46-213ENST00000471987 PLVAPQ9BX97 442 aa10.04□□□□□ -0.8
CD46-213ENST00000471987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.04□□□□□ -0.8
CD46-213ENST00000471987 SPDYE3A6NKU9 549 aa10.03□□□□□ -0.8
CD46-213ENST00000471987 EPB42P16452 691 aa10.03□□□□□ -0.8
CD46-213ENST00000471987 DMGDHQ9UI17 866 aaKnown RBP10.03□□□□□ -0.8
CD46-213ENST00000471987 BCS1LQ9Y276 419 aa10.03□□□□□ -0.8
CD46-213ENST00000471987 M0R082 166 aa10.02□□□□□ -0.81
CD46-213ENST00000471987 SWI5Q1ZZU3 235 aa10.02□□□□□ -0.81
CD46-213ENST00000471987 ZNF417Q8TAU3 575 aa10.02□□□□□ -0.81
CD46-213ENST00000471987 ZNF587Q96SQ5 575 aaPredicted RBP10.02□□□□□ -0.81
CD46-213ENST00000471987 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
CD46-213ENST00000471987 QTRT2Q9H974 415 aaKnown RBP10.02□□□□□ -0.81
CD46-213ENST00000471987 PRDM6Q9NQX0 595 aa10.02□□□□□ -0.81
CD46-213ENST00000471987 KLK14Q9P0G3 267 aa10.02□□□□□ -0.81
CD46-213ENST00000471987 DGKZQ13574 1117 aa10.01□□□□□ -0.81
CD46-213ENST00000471987 ELOAQ14241 798 aaKnown RBP10.01□□□□□ -0.81
CD46-213ENST00000471987 MYO19Q96H55 970 aa10.01□□□□□ -0.81
CD46-213ENST00000471987 PNMA5Q96PV4 448 aa10.01□□□□□ -0.81
CD46-213ENST00000471987 GSX2Q9BZM3 304 aa10.01□□□□□ -0.81
CD46-213ENST00000471987 STARD13Q9Y3M8 1113 aa10.01□□□□□ -0.81
CD46-213ENST00000471987 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
CD46-213ENST00000471987 SPATA31C1P0DKV0 1188 aa10□□□□□ -0.81
CD46-213ENST00000471987 IDH3AP50213 366 aa10□□□□□ -0.81
CD46-213ENST00000471987 CCINQ13939 588 aa10□□□□□ -0.81
CD46-213ENST00000471987 C11orf91Q3C1V1 193 aa10□□□□□ -0.81
CD46-213ENST00000471987 MICALL1Q8N3F8 863 aa10□□□□□ -0.81
CD46-213ENST00000471987 UBE2OQ9C0C9 1292 aaKnown RBP10□□□□□ -0.81
CD46-213ENST00000471987 C1QTNF9BB2RNN3 333 aa9.99□□□□□ -0.81
CD46-213ENST00000471987 ALBP02768 609 aa9.99□□□□□ -0.81
CD46-213ENST00000471987 INPP5BP32019 993 aa9.99□□□□□ -0.81
CD46-213ENST00000471987 CD163Q86VB7 1156 aa9.99□□□□□ -0.81
CD46-213ENST00000471987 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.99□□□□□ -0.81
CD46-213ENST00000471987 ARSDP51689 593 aa9.98□□□□□ -0.81
CD46-213ENST00000471987 TBC1D8BQ0IIM8 1120 aa9.98□□□□□ -0.81
CD46-213ENST00000471987 PRRT3Q5FWE3 981 aa9.98□□□□□ -0.81
CD46-213ENST00000471987 IGFLR1Q9H665 355 aa9.98□□□□□ -0.81
CD46-213ENST00000471987 NFKB1P19838 968 aa9.97□□□□□ -0.81
CD46-213ENST00000471987 BAG6P46379 1132 aa9.97□□□□□ -0.81
CD46-213ENST00000471987 C20orf204Q6ZNR8 217 aa9.97□□□□□ -0.81
CD46-213ENST00000471987 C11orf16Q9NQ32 467 aa9.97□□□□□ -0.81
CD46-213ENST00000471987 ZMIZ1Q9ULJ6 1067 aa9.97□□□□□ -0.81
CD46-213ENST00000471987 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.96□□□□□ -0.82
CD46-213ENST00000471987 LILRB5O75023 590 aa9.96□□□□□ -0.82
CD46-213ENST00000471987 MICAL2O94851 1124 aa9.96□□□□□ -0.82
CD46-213ENST00000471987 CHRNA4P43681 627 aa9.96□□□□□ -0.82
CD46-213ENST00000471987 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
CD46-213ENST00000471987 FKBP5Q13451 457 aaPredicted RBP9.96□□□□□ -0.82
CD46-213ENST00000471987 COL9A3Q14050 684 aaPredicted RBP9.96□□□□□ -0.82
CD46-213ENST00000471987 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
CD46-213ENST00000471987 KRTAP4-8Q9BYQ9 185 aa9.96□□□□□ -0.82
CD46-213ENST00000471987 SLC6A14Q9UN76 642 aa9.96□□□□□ -0.82
CD46-213ENST00000471987 PRMT3O60678 531 aa9.95□□□□□ -0.82
CD46-213ENST00000471987 ATG7O95352 703 aa9.95□□□□□ -0.82
CD46-213ENST00000471987 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
CD46-213ENST00000471987 C8orf86Q6ZUL3 223 aa9.95□□□□□ -0.82
CD46-213ENST00000471987 IFT43Q96FT9 208 aa9.95□□□□□ -0.82
CD46-213ENST00000471987 DNAJB12Q9NXW2 375 aaKnown RBP9.95□□□□□ -0.82
CD46-213ENST00000471987 ADAM23O75077 832 aa9.94□□□□□ -0.82
CD46-213ENST00000471987 NID1P14543 1247 aa9.94□□□□□ -0.82
CD46-213ENST00000471987 FAM69CQ0P6D2 419 aa9.94□□□□□ -0.82
CD46-213ENST00000471987 PCSK7Q16549 785 aa9.94□□□□□ -0.82
CD46-213ENST00000471987 STK32AQ8WU08 396 aa9.94□□□□□ -0.82
CD46-213ENST00000471987 CCDC97Q96F63 343 aaPredicted RBP9.94□□□□□ -0.82
CD46-213ENST00000471987 LRFN2Q9ULH4 789 aa9.94□□□□□ -0.82
CD46-213ENST00000471987 MAP3K6O95382 1288 aa9.93□□□□□ -0.82
CD46-213ENST00000471987 TRIM28Q13263 835 aaKnown RBP9.93□□□□□ -0.82
CD46-213ENST00000471987 OCLNQ16625 522 aa9.93□□□□□ -0.82
CD46-213ENST00000471987 XP32Q5T750 250 aa9.93□□□□□ -0.82
CD46-213ENST00000471987 COX20Q5RI15 118 aa9.92□□□□□ -0.82
CD46-213ENST00000471987 JPH1Q9HDC5 661 aaPredicted RBP9.92□□□□□ -0.82
CD46-213ENST00000471987 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
CD46-213ENST00000471987 APBA3O96018 575 aa9.91□□□□□ -0.82
CD46-213ENST00000471987 PSAPL1Q6NUJ1 521 aa9.91□□□□□ -0.82
CD46-213ENST00000471987 TREML1Q86YW5 311 aa9.91□□□□□ -0.82
CD46-213ENST00000471987 COL26A1Q96A83 441 aa9.91□□□□□ -0.82
CD46-213ENST00000471987 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
CD46-213ENST00000471987 RTCBQ9Y3I0 505 aaKnown RBP9.91□□□□□ -0.82
CD46-213ENST00000471987 K7ELQ4 463 aaPredicted RBP9.9□□□□□ -0.82
CD46-213ENST00000471987 OPLAHO14841 1288 aa9.9□□□□□ -0.82
CD46-213ENST00000471987 TRAPPC3LQ5T215 181 aa9.9□□□□□ -0.82
CD46-213ENST00000471987 KRT25Q7Z3Z0 450 aa9.9□□□□□ -0.82
CD46-213ENST00000471987 FAM229AH3BQW9 127 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms