RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 CCDC93Q567U6 631 aa27.23■■□□□ 1.95
SREBF1-210ENST00000471445 MRS2Q9HD23 443 aa27.23■■□□□ 1.95
SREBF1-210ENST00000471445 WDR90Q96KV7 1748 aa27.23■■□□□ 1.95
SREBF1-210ENST00000471445 RNF123Q5XPI4 1314 aa27.22■■□□□ 1.95
SREBF1-210ENST00000471445 DBF4Q9UBU7 674 aaPredicted RBP27.22■■□□□ 1.95
SREBF1-210ENST00000471445 TOMM70O94826 608 aa27.21■■□□□ 1.95
SREBF1-210ENST00000471445 ALDH1B1P30837 517 aa27.21■■□□□ 1.95
SREBF1-210ENST00000471445 GLTPD2A6NH11 291 aa27.2■■□□□ 1.94
SREBF1-210ENST00000471445 CCDC27Q2M243 656 aa27.2■■□□□ 1.94
SREBF1-210ENST00000471445 DDX60Q8IY21 1712 aaKnown RBP27.2■■□□□ 1.94
SREBF1-210ENST00000471445 HOXA10P31260 410 aaPredicted RBP27.19■■□□□ 1.94
SREBF1-210ENST00000471445 TCIRG1Q13488 830 aa27.19■■□□□ 1.94
SREBF1-210ENST00000471445 UTP14AQ9BVJ6 771 aaKnown RBP27.19■■□□□ 1.94
SREBF1-210ENST00000471445 HSPA6P17066 643 aa27.18■■□□□ 1.94
SREBF1-210ENST00000471445 NLRP10Q86W26 655 aa27.18■■□□□ 1.94
SREBF1-210ENST00000471445 PLBD2Q8NHP8 589 aa27.18■■□□□ 1.94
SREBF1-210ENST00000471445 OLFM4Q6UX06 510 aa27.17■■□□□ 1.94
SREBF1-210ENST00000471445 C3orf67Q6ZVT6 689 aa27.17■■□□□ 1.94
SREBF1-210ENST00000471445 RPGRQ92834 1020 aaKnown RBP27.17■■□□□ 1.94
SREBF1-210ENST00000471445 HYPKQ9NX55 129 aa27.17■■□□□ 1.94
SREBF1-210ENST00000471445 FKBP4Q02790 459 aaKnown RBP eCLIP27.16■■□□□ 1.94
SREBF1-210ENST00000471445 SLC10A5Q5PT55 438 aa27.16■■□□□ 1.94
SREBF1-210ENST00000471445 RRAGCQ9HB90 399 aa27.16■■□□□ 1.94
SREBF1-210ENST00000471445 NCBP3Q53F19 620 aaKnown RBP27.15■■□□□ 1.94
SREBF1-210ENST00000471445 RBM46Q8TBY0 533 aaKnown RBP27.15■■□□□ 1.94
SREBF1-210ENST00000471445 ANKRD13DQ6ZTN6 518 aa27.14■■□□□ 1.94
SREBF1-210ENST00000471445 WWC1Q8IX03 1113 aa27.14■■□□□ 1.94
SREBF1-210ENST00000471445 RTKN2Q8IZC4 609 aa27.14■■□□□ 1.94
SREBF1-210ENST00000471445 C8orf58Q8NAV2 365 aa27.14■■□□□ 1.94
SREBF1-210ENST00000471445 CRAMP1Q96RY5 1269 aa27.14■■□□□ 1.94
SREBF1-210ENST00000471445 C16orf71Q8IYS4 520 aaPredicted RBP27.13■■□□□ 1.93
SREBF1-210ENST00000471445 RBM17Q96I25 401 aaKnown RBP27.13■■□□□ 1.93
SREBF1-210ENST00000471445 NLRP3Q96P20 1036 aa27.13■■□□□ 1.93
SREBF1-210ENST00000471445 ELL2O00472 640 aaPredicted RBP27.12■■□□□ 1.93
SREBF1-210ENST00000471445 ISCA1Q9BUE6 129 aa27.12■■□□□ 1.93
SREBF1-210ENST00000471445 SH3TC1Q8TE82 1336 aa27.12■■□□□ 1.93
SREBF1-210ENST00000471445 IFFO2Q5TF58 517 aa27.11■■□□□ 1.93
SREBF1-210ENST00000471445 CC2D2BQ6DHV5 1058 aa27.11■■□□□ 1.93
SREBF1-210ENST00000471445 DPY19L2Q6NUT2 758 aa27.1■■□□□ 1.93
SREBF1-210ENST00000471445 TRMT112Q9UI30 125 aaKnown RBP27.1■■□□□ 1.93
SREBF1-210ENST00000471445 IL16Q14005 1332 aa27.1■■□□□ 1.93
SREBF1-210ENST00000471445 TAF1P21675 1872 aa27.09■■□□□ 1.93
SREBF1-210ENST00000471445 CEP350Q5VT06 3117 aa27.09■■□□□ 1.93
SREBF1-210ENST00000471445 PPEF1O14829 653 aaPredicted RBP27.09■■□□□ 1.93
SREBF1-210ENST00000471445 VEGFAP15692 232 aaPredicted RBP27.09■■□□□ 1.93
SREBF1-210ENST00000471445 TSR2Q969E8 191 aaKnown RBP27.09■■□□□ 1.93
SREBF1-210ENST00000471445 PSMD1Q99460 953 aa27.09■■□□□ 1.93
SREBF1-210ENST00000471445 ZNF277Q9NRM2 450 aaPredicted RBP27.09■■□□□ 1.93
SREBF1-210ENST00000471445 LRRC37AA6NMS7 1700 aa27.09■■□□□ 1.93
SREBF1-210ENST00000471445 SCN4AP35499 1836 aa27.09■■□□□ 1.93
SREBF1-210ENST00000471445 SYNE4Q8N205 404 aa27.08■■□□□ 1.93
SREBF1-210ENST00000471445 TSPYL6Q8N831 410 aa27.08■■□□□ 1.93
SREBF1-210ENST00000471445 PHAXQ9H814 394 aaKnown RBP27.08■■□□□ 1.93
SREBF1-210ENST00000471445 ABCC4O15439 1325 aa27.08■■□□□ 1.93
SREBF1-210ENST00000471445 COL4A5P29400 1685 aa27.08■■□□□ 1.92
SREBF1-210ENST00000471445 POTECB2RU33 542 aa27.07■■□□□ 1.92
SREBF1-210ENST00000471445 HCLS1P14317 486 aaPredicted RBP27.07■■□□□ 1.92
SREBF1-210ENST00000471445 GOLGA2Q08379 1002 aa27.07■■□□□ 1.92
SREBF1-210ENST00000471445 FSTL1Q12841 308 aa27.07■■□□□ 1.92
SREBF1-210ENST00000471445 SLC51AQ86UW1 340 aa27.07■■□□□ 1.92
SREBF1-210ENST00000471445 ATP5J2-PTCD1G3V325 749 aa27.06■■□□□ 1.92
SREBF1-210ENST00000471445 IARSP41252 1262 aaKnown RBP27.06■■□□□ 1.92
SREBF1-210ENST00000471445 GRIPAP1Q4V328 841 aa27.06■■□□□ 1.92
SREBF1-210ENST00000471445 CCDC30Q5VVM6 783 aa27.06■■□□□ 1.92
SREBF1-210ENST00000471445 CHMP4AQ9BY43 222 aa27.06■■□□□ 1.92
SREBF1-210ENST00000471445 CACNA1FO60840 1977 aa27.06■■□□□ 1.92
SREBF1-210ENST00000471445 TRIM28Q13263 835 aaKnown RBP27.05■■□□□ 1.92
SREBF1-210ENST00000471445 RIC3Q7Z5B4 369 aa27.04■■□□□ 1.92
SREBF1-210ENST00000471445 DDNO94850 711 aaPredicted RBP27.03■■□□□ 1.92
SREBF1-210ENST00000471445 SMC1BQ8NDV3 1235 aa27.03■■□□□ 1.92
SREBF1-210ENST00000471445 ZNF541Q9H0D2 1346 aa27.03■■□□□ 1.92
SREBF1-210ENST00000471445 APLP1P51693 650 aa27.02■■□□□ 1.92
SREBF1-210ENST00000471445 ZNF428Q96B54 188 aa27.02■■□□□ 1.92
SREBF1-210ENST00000471445 ATP6V0A2Q9Y487 856 aa27.02■■□□□ 1.92
SREBF1-210ENST00000471445 FANCIQ9NVI1 1328 aa27.01■■□□□ 1.91
SREBF1-210ENST00000471445 TWISTNBQ3B726 338 aaPredicted RBP27.01■■□□□ 1.91
SREBF1-210ENST00000471445 L3MBTL3Q96JM7 780 aaPredicted RBP27.01■■□□□ 1.91
SREBF1-210ENST00000471445 COL4A1P02462 1669 aa27.01■■□□□ 1.91
SREBF1-210ENST00000471445 FZD9O00144 591 aa27■■□□□ 1.91
SREBF1-210ENST00000471445 TCERG1O14776 1098 aaKnown RBP27■■□□□ 1.91
SREBF1-210ENST00000471445 FAM89AQ96GI7 184 aa27■■□□□ 1.91
SREBF1-210ENST00000471445 DUOX1Q9NRD9 1551 aa27■■□□□ 1.91
SREBF1-210ENST00000471445 GRAPQ13588 217 aa26.99■■□□□ 1.91
SREBF1-210ENST00000471445 DDX46Q7L014 1031 aaKnown RBP26.99■■□□□ 1.91
SREBF1-210ENST00000471445 WDR63Q8IWG1 891 aa26.99■■□□□ 1.91
SREBF1-210ENST00000471445 GRAPLQ8TC17 118 aaPredicted RBP26.99■■□□□ 1.91
SREBF1-210ENST00000471445 MYD88Q99836 296 aa26.99■■□□□ 1.91
SREBF1-210ENST00000471445 BBOX1O75936 387 aa26.98■■□□□ 1.91
SREBF1-210ENST00000471445 DDX58O95786 925 aaKnown RBP26.98■■□□□ 1.91
SREBF1-210ENST00000471445 ADAMTSL1Q8N6G6 1762 aa26.97■■□□□ 1.91
SREBF1-210ENST00000471445 SF3B3Q15393 1217 aaKnown RBP26.97■■□□□ 1.91
SREBF1-210ENST00000471445 FAM9BQ8IZU0 186 aa26.97■■□□□ 1.91
SREBF1-210ENST00000471445 METTL22Q9BUU2 404 aaPredicted RBP26.97■■□□□ 1.91
SREBF1-210ENST00000471445 STK31Q9BXU1 1019 aa26.97■■□□□ 1.91
SREBF1-210ENST00000471445 MYH3P11055 1940 aa26.96■■□□□ 1.91
SREBF1-210ENST00000471445 LTBP1Q14766 1721 aa26.96■■□□□ 1.91
SREBF1-210ENST00000471445 SP8Q8IXZ3 490 aa26.96■■□□□ 1.91
SREBF1-210ENST00000471445 ZBTB38Q8NAP3 1195 aaPredicted RBP26.96■■□□□ 1.91
SREBF1-210ENST00000471445 CCDC191Q8NCU4 936 aa26.96■■□□□ 1.91
SREBF1-210ENST00000471445 JDP2Q8WYK2 163 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms