RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 XAGE3Q8WTP9 111 aa21.84■■□□□ 1.09
HSPG2-208ENST00000471322 HYPKQ9NX55 129 aa21.84■■□□□ 1.09
HSPG2-208ENST00000471322 PXDNLA1KZ92 1463 aa21.83■■□□□ 1.09
HSPG2-208ENST00000471322 SCN7AQ01118 1682 aa21.83■■□□□ 1.09
HSPG2-208ENST00000471322 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.08
HSPG2-208ENST00000471322 GNAI3P08754 354 aa21.82■■□□□ 1.08
HSPG2-208ENST00000471322 C1orf115Q9H7X2 142 aa21.82■■□□□ 1.08
HSPG2-208ENST00000471322 FAM177BA6PVY3 158 aa21.81■■□□□ 1.08
HSPG2-208ENST00000471322 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
HSPG2-208ENST00000471322 CCDC24Q8N4L8 307 aa21.81■■□□□ 1.08
HSPG2-208ENST00000471322 ANKRD44Q8N8A2 993 aa21.81■■□□□ 1.08
HSPG2-208ENST00000471322 PHAXQ9H814 394 aaKnown RBP21.81■■□□□ 1.08
HSPG2-208ENST00000471322 MAP3K15Q6ZN16 1313 aa21.81■■□□□ 1.08
HSPG2-208ENST00000471322 SETDB2Q96T68 719 aa21.8■■□□□ 1.08
HSPG2-208ENST00000471322 ZNF652Q9Y2D9 606 aa21.8■■□□□ 1.08
HSPG2-208ENST00000471322 SERPINB2P05120 415 aa21.8■■□□□ 1.08
HSPG2-208ENST00000471322 NUCB1Q02818 461 aa21.8■■□□□ 1.08
HSPG2-208ENST00000471322 MEIS3Q99687 375 aa21.8■■□□□ 1.08
HSPG2-208ENST00000471322 BCORQ6W2J9 1755 aa21.79■■□□□ 1.08
HSPG2-208ENST00000471322 GPTP24298 496 aa21.79■■□□□ 1.08
HSPG2-208ENST00000471322 SIRT2Q8IXJ6 389 aa21.79■■□□□ 1.08
HSPG2-208ENST00000471322 NIP7Q9Y221 180 aaKnown RBP eCLIP21.79■■□□□ 1.08
HSPG2-208ENST00000471322 GNAI2P04899 355 aa21.78■■□□□ 1.08
HSPG2-208ENST00000471322 CLEC4GQ6UXB4 293 aa21.78■■□□□ 1.08
HSPG2-208ENST00000471322 ERVV-1B6SEH8 477 aa21.77■■□□□ 1.08
HSPG2-208ENST00000471322 HMMRO75330 724 aa21.77■■□□□ 1.08
HSPG2-208ENST00000471322 DDX58O95786 925 aaKnown RBP21.77■■□□□ 1.08
HSPG2-208ENST00000471322 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
HSPG2-208ENST00000471322 SRCIN1Q9C0H9 1055 aa21.77■■□□□ 1.08
HSPG2-208ENST00000471322 CD2APQ9Y5K6 639 aa21.77■■□□□ 1.08
HSPG2-208ENST00000471322 NPHP1O15259 732 aa21.77■■□□□ 1.07
HSPG2-208ENST00000471322 CEP85Q6P2H3 762 aa21.77■■□□□ 1.07
HSPG2-208ENST00000471322 CARMIL3Q8ND23 1372 aa21.76■■□□□ 1.07
HSPG2-208ENST00000471322 CHD1LQ86WJ1 897 aa21.76■■□□□ 1.07
HSPG2-208ENST00000471322 DCTPP1Q9H773 170 aa21.76■■□□□ 1.07
HSPG2-208ENST00000471322 PI4KAP2A4QPH2 592 aa21.75■■□□□ 1.07
HSPG2-208ENST00000471322 KSR2Q6VAB6 950 aa21.75■■□□□ 1.07
HSPG2-208ENST00000471322 PI4KAP1Q8N8J0 262 aa21.75■■□□□ 1.07
HSPG2-208ENST00000471322 A0A0G2JLW4 131 aa21.74■■□□□ 1.07
HSPG2-208ENST00000471322 GIGYF2Q6Y7W6 1299 aaKnown RBP21.74■■□□□ 1.07
HSPG2-208ENST00000471322 C10orf71Q711Q0 1435 aa21.74■■□□□ 1.07
HSPG2-208ENST00000471322 NBPF5PQ86XG9 351 aaPredicted RBP21.74■■□□□ 1.07
HSPG2-208ENST00000471322 AFDNP55196 1824 aaKnown RBP21.74■■□□□ 1.07
HSPG2-208ENST00000471322 ATP10DQ9P241 1426 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 ANKRD13DQ6ZTN6 518 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 UBN2Q6ZU65 1347 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 NUP98P52948 1817 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 BEND3Q5T5X7 828 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 ANKRD45Q5TZF3 282 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 PRR5LQ6MZQ0 368 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 CNBD1Q8NA66 436 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 HDAC5Q9UQL6 1122 aa21.73■■□□□ 1.07
HSPG2-208ENST00000471322 ALDH1L1O75891 902 aa21.72■■□□□ 1.07
HSPG2-208ENST00000471322 CHRNA5P30532 468 aa21.72■■□□□ 1.07
HSPG2-208ENST00000471322 USP44Q9H0E7 712 aa21.72■■□□□ 1.07
HSPG2-208ENST00000471322 UBTFL1P0CB47 393 aaPredicted RBP21.71■■□□□ 1.07
HSPG2-208ENST00000471322 C8orf34Q49A92 452 aa21.71■■□□□ 1.07
HSPG2-208ENST00000471322 PLBD2Q8NHP8 589 aa21.71■■□□□ 1.07
HSPG2-208ENST00000471322 ZBTB47Q9UFB7 747 aaPredicted RBP21.71■■□□□ 1.07
HSPG2-208ENST00000471322 ADCY9O60503 1353 aa21.71■■□□□ 1.07
HSPG2-208ENST00000471322 DPEP1P16444 411 aa21.7■■□□□ 1.06
HSPG2-208ENST00000471322 RIC3Q7Z5B4 369 aa21.7■■□□□ 1.06
HSPG2-208ENST00000471322 NUTM1Q86Y26 1132 aa21.7■■□□□ 1.06
HSPG2-208ENST00000471322 ATP5J2-PTCD1G3V325 749 aa21.69■■□□□ 1.06
HSPG2-208ENST00000471322 SUSD4Q5VX71 490 aa21.69■■□□□ 1.06
HSPG2-208ENST00000471322 ZNF34Q8IZ26 560 aa21.69■■□□□ 1.06
HSPG2-208ENST00000471322 MAP3K2Q9Y2U5 619 aa21.69■■□□□ 1.06
HSPG2-208ENST00000471322 N4BP2Q86UW6 1770 aaPredicted RBP21.69■■□□□ 1.06
HSPG2-208ENST00000471322 RGL2O15211 777 aa21.69■■□□□ 1.06
HSPG2-208ENST00000471322 GTF2E1P29083 439 aaPredicted RBP21.69■■□□□ 1.06
HSPG2-208ENST00000471322 GPR162Q16538 588 aa21.69■■□□□ 1.06
HSPG2-208ENST00000471322 LNPKQ9C0E8 428 aa21.69■■□□□ 1.06
HSPG2-208ENST00000471322 NRXN2Q9P2S2 1712 aa21.68■■□□□ 1.06
HSPG2-208ENST00000471322 IBTKQ9P2D0 1353 aaPredicted RBP21.68■■□□□ 1.06
HSPG2-208ENST00000471322 ANP32AP39687 249 aaKnown RBP21.68■■□□□ 1.06
HSPG2-208ENST00000471322 TGFB2P61812 414 aa21.68■■□□□ 1.06
HSPG2-208ENST00000471322 ATP8B2P98198 1209 aa21.68■■□□□ 1.06
HSPG2-208ENST00000471322 TCIRG1Q13488 830 aa21.68■■□□□ 1.06
HSPG2-208ENST00000471322 TPTE2Q6XPS3 522 aa21.68■■□□□ 1.06
HSPG2-208ENST00000471322 ST5P78524 1137 aa21.67■■□□□ 1.06
HSPG2-208ENST00000471322 KIF13BQ9NQT8 1826 aa21.67■■□□□ 1.06
HSPG2-208ENST00000471322 YBX3P16989 372 aaKnown RBP eCLIP21.66■■□□□ 1.063e-8■□□□□ 8.5
HSPG2-208ENST00000471322 LINS1Q8NG48 757 aa21.66■■□□□ 1.06
HSPG2-208ENST00000471322 KCNA3P22001 575 aa21.66■■□□□ 1.06
HSPG2-208ENST00000471322 ERFEQ4G0M1 354 aa21.66■■□□□ 1.06
HSPG2-208ENST00000471322 MYD88Q99836 296 aa21.66■■□□□ 1.06
HSPG2-208ENST00000471322 NEXNQ0ZGT2 675 aa21.65■■□□□ 1.06
HSPG2-208ENST00000471322 HSP90AB3PQ58FF7 597 aa21.65■■□□□ 1.06
HSPG2-208ENST00000471322 NLRP10Q86W26 655 aa21.65■■□□□ 1.06
HSPG2-208ENST00000471322 SYNE4Q8N205 404 aa21.65■■□□□ 1.06
HSPG2-208ENST00000471322 BRIP1Q9BX63 1249 aa21.65■■□□□ 1.06
HSPG2-208ENST00000471322 LRRFIP2Q9Y608 721 aaKnown RBP21.65■■□□□ 1.06
HSPG2-208ENST00000471322 NTSR2O95665 410 aa21.64■■□□□ 1.05
HSPG2-208ENST00000471322 RTL5Q5HYW3 569 aaPredicted RBP21.64■■□□□ 1.05
HSPG2-208ENST00000471322 C2CD5Q86YS7 1000 aa21.64■■□□□ 1.05
HSPG2-208ENST00000471322 ABCC12Q96J65 1359 aa21.64■■□□□ 1.05
HSPG2-208ENST00000471322 KIAA1551Q9HCM1 1747 aa21.64■■□□□ 1.05
HSPG2-208ENST00000471322 DCAF8L1A6NGE4 600 aa21.63■■□□□ 1.05
HSPG2-208ENST00000471322 PARP10Q53GL7 1025 aa21.63■■□□□ 1.05
HSPG2-208ENST00000471322 NYXQ9GZU5 481 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 651.3 ms