RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-234ENST00000471294 COL24A1Q17RW2 1714 aa15.17■□□□□ 0.02
HDLBP-234ENST00000471294 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
HDLBP-234ENST00000471294 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
HDLBP-234ENST00000471294 SETDB2Q96T68 719 aa15.16■□□□□ 0.02
HDLBP-234ENST00000471294 NYXQ9GZU5 481 aa15.16■□□□□ 0.02
HDLBP-234ENST00000471294 C9orf78Q9NZ63 289 aaPredicted RBP15.16■□□□□ 0.02
HDLBP-234ENST00000471294 NIP7Q9Y221 180 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDLBP-234ENST00000471294 CDHR2Q9BYE9 1310 aa15.16■□□□□ 0.02
HDLBP-234ENST00000471294 CARMIL3Q8ND23 1372 aa15.15■□□□□ 0.02
HDLBP-234ENST00000471294 TM4SF1P30408 202 aa15.15■□□□□ 0.02
HDLBP-234ENST00000471294 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
HDLBP-234ENST00000471294 PLA2G12BQ9BX93 195 aa15.15■□□□□ 0.02
HDLBP-234ENST00000471294 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
HDLBP-234ENST00000471294 UBN2Q6ZU65 1347 aa15.15■□□□□ 0.02
HDLBP-234ENST00000471294 ATP5J2-PTCD1G3V325 749 aa15.14■□□□□ 0.01
HDLBP-234ENST00000471294 GNAI2P04899 355 aa15.14■□□□□ 0.01
HDLBP-234ENST00000471294 UBTFL1P0CB47 393 aaPredicted RBP15.14■□□□□ 0.01
HDLBP-234ENST00000471294 CASP7P55210 303 aa15.14■□□□□ 0.01
HDLBP-234ENST00000471294 MEIS3Q99687 375 aa15.14■□□□□ 0.01
HDLBP-234ENST00000471294 UTP14AQ9BVJ6 771 aaKnown RBP15.14■□□□□ 0.01
HDLBP-234ENST00000471294 RIC1Q4ADV7 1423 aa15.14■□□□□ 0.01
HDLBP-234ENST00000471294 FKBP8Q14318 412 aa15.13■□□□□ 0.01
HDLBP-234ENST00000471294 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
HDLBP-234ENST00000471294 TPTE2Q6XPS3 522 aa15.13■□□□□ 0.01
HDLBP-234ENST00000471294 RPAP2Q8IXW5 612 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-234ENST00000471294 SH3TC1Q8TE82 1336 aa15.13■□□□□ 0.01
HDLBP-234ENST00000471294 NTSR2O95665 410 aa15.12■□□□□ 0.01
HDLBP-234ENST00000471294 NBPF7P0C2Y1 421 aaPredicted RBP15.12■□□□□ 0.01
HDLBP-234ENST00000471294 MTX1Q13505 466 aa15.12■□□□□ 0.01
HDLBP-234ENST00000471294 NFIXQ14938 502 aa15.12■□□□□ 0.01
HDLBP-234ENST00000471294 SLC10A5Q5PT55 438 aa15.12■□□□□ 0.01
HDLBP-234ENST00000471294 GPTP24298 496 aa15.11■□□□□ 0.01
HDLBP-234ENST00000471294 RABL6Q3YEC7 729 aaPredicted RBP15.11■□□□□ 0.01
HDLBP-234ENST00000471294 SUSD4Q5VX71 490 aa15.11■□□□□ 0.01
HDLBP-234ENST00000471294 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
HDLBP-234ENST00000471294 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
HDLBP-234ENST00000471294 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
HDLBP-234ENST00000471294 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
HDLBP-234ENST00000471294 IRX6P78412 446 aaPredicted RBP15.1■□□□□ 0.01
HDLBP-234ENST00000471294 UBE3BQ7Z3V4 1068 aa15.1■□□□□ 0.01
HDLBP-234ENST00000471294 LAMB2P55268 1798 aa15.1■□□□□ 0.01
HDLBP-234ENST00000471294 POLRMTO00411 1230 aaKnown RBP15.09■□□□□ 0.01
HDLBP-234ENST00000471294 MSH5O43196 834 aa15.09■□□□□ 0.01
HDLBP-234ENST00000471294 NBPF5PQ86XG9 351 aaPredicted RBP15.09■□□□□ 0.01
HDLBP-234ENST00000471294 ANKRD44Q8N8A2 993 aa15.09■□□□□ 0.01
HDLBP-234ENST00000471294 PPP4R2Q9NY27 417 aa15.09■□□□□ 0.01
HDLBP-234ENST00000471294 PDE8AO60658 829 aa15.08■□□□□ 0
HDLBP-234ENST00000471294 HMMRO75330 724 aa15.08■□□□□ 0
HDLBP-234ENST00000471294 HDAC1Q13547 482 aaPredicted RBP15.08■□□□□ 0
HDLBP-234ENST00000471294 MTFR1LQ9H019 292 aa15.08■□□□□ 0
HDLBP-234ENST00000471294 LRRFIP2Q9Y608 721 aaKnown RBP15.08■□□□□ 0
HDLBP-234ENST00000471294 RTL9Q8NET4 1388 aa15.08■□□□□ 0
HDLBP-234ENST00000471294 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
HDLBP-234ENST00000471294 SERPINB2P05120 415 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 CSF1RP07333 972 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 ATP8B2P98198 1209 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 CEP85Q6P2H3 762 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 CNBD1Q8NA66 436 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 FAM89AQ96GI7 184 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 KAZALD1Q96I82 304 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 SUCLG2Q96I99 432 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 PDZRN3Q9UPQ7 1066 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 PARP3Q9Y6F1 533 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 MYH3P11055 1940 aa15.07■□□□□ 0
HDLBP-234ENST00000471294 MMP10P09238 476 aa15.06■□□□□ 0
HDLBP-234ENST00000471294 FOXO4P98177 505 aa15.06■□□□□ 0
HDLBP-234ENST00000471294 DDR1Q08345 913 aa15.06■□□□□ 0
HDLBP-234ENST00000471294 SSH3Q8TE77 659 aa15.06■□□□□ 0
HDLBP-234ENST00000471294 PCDHB15Q9Y5E8 787 aa15.06■□□□□ 0
HDLBP-234ENST00000471294 KLRG2A4D1S0 409 aaPredicted RBP15.05■□□□□ -0
HDLBP-234ENST00000471294 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ -0
HDLBP-234ENST00000471294 CTSWP56202 376 aa15.05■□□□□ -0
HDLBP-234ENST00000471294 ST5P78524 1137 aa15.05■□□□□ -0
HDLBP-234ENST00000471294 POLA2Q14181 598 aa15.05■□□□□ -0
HDLBP-234ENST00000471294 SF3B3Q15393 1217 aaKnown RBP15.05■□□□□ -0
HDLBP-234ENST00000471294 PRR5LQ6MZQ0 368 aa15.05■□□□□ -0
HDLBP-234ENST00000471294 BICDL1Q6ZP65 573 aa15.05■□□□□ -0
HDLBP-234ENST00000471294 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ -0
HDLBP-234ENST00000471294 BICC1Q9H694 974 aaKnown RBP15.05■□□□□ -0
HDLBP-234ENST00000471294 DDX60Q8IY21 1712 aaKnown RBP15.05■□□□□ -0
HDLBP-234ENST00000471294 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
HDLBP-234ENST00000471294 NLRP3Q96P20 1036 aa15.04■□□□□ -0
HDLBP-234ENST00000471294 FBXO3Q9UK99 471 aa15.04■□□□□ -0
HDLBP-234ENST00000471294 ERFEQ4G0M1 354 aa15.03■□□□□ -0
HDLBP-234ENST00000471294 CCDC152Q4G0S7 254 aa15.03■□□□□ -0
HDLBP-234ENST00000471294 TTLL11Q8NHH1 800 aa15.03■□□□□ -0
HDLBP-234ENST00000471294 BRIP1Q9BX63 1249 aa15.03■□□□□ -0
HDLBP-234ENST00000471294 GTF3C3Q9Y5Q9 886 aa15.03■□□□□ -0
HDLBP-234ENST00000471294 CRY2Q49AN0 593 aa15.02■□□□□ -0
HDLBP-234ENST00000471294 EPHA10Q5JZY3 1008 aa15.02■□□□□ -0
HDLBP-234ENST00000471294 LMBR1LQ6UX01 489 aa15.02■□□□□ -0
HDLBP-234ENST00000471294 NUTM1Q86Y26 1132 aa15.02■□□□□ -0
HDLBP-234ENST00000471294 SIRT2Q8IXJ6 389 aa15.02■□□□□ -0
HDLBP-234ENST00000471294 ABCC12Q96J65 1359 aa15.01□□□□□ -0.01
HDLBP-234ENST00000471294 NPHP1O15259 732 aa15.01□□□□□ -0.01
HDLBP-234ENST00000471294 SRGAP3O43295 1099 aa15.01□□□□□ -0.01
HDLBP-234ENST00000471294 POLD1P28340 1107 aa15.01□□□□□ -0.01
HDLBP-234ENST00000471294 PDE6BP35913 854 aa15.01□□□□□ -0.01
HDLBP-234ENST00000471294 HSP90AB4PQ58FF6 505 aa15.01□□□□□ -0.01
HDLBP-234ENST00000471294 GCC1Q96CN9 775 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms