RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 AVENQ9NQS1 362 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-206ENST00000471167 CARNS1A5YM72 827 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 ADH6P28332 368 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 INPP5BP32019 993 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 SCNN1AP37088 669 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 RASSF7Q02833 373 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 LINC00114Q6XXX2 140 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 NEDD1Q8NHV4 660 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 ENAMQ9NRM1 1142 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 KCNH4Q9UQ05 1017 aa10.29□□□□□ -0.76
PRPF40A-206ENST00000471167 OPLAHO14841 1288 aa10.28□□□□□ -0.76
PRPF40A-206ENST00000471167 IRS1P35568 1242 aa10.28□□□□□ -0.76
PRPF40A-206ENST00000471167 SPEM2Q0P670 501 aa10.28□□□□□ -0.76
PRPF40A-206ENST00000471167 TNFRSF10BO14763 440 aa10.27□□□□□ -0.77
PRPF40A-206ENST00000471167 PRR12Q9ULL5 1215 aa10.27□□□□□ -0.77
PRPF40A-206ENST00000471167 SUPT5HO00267 1087 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-206ENST00000471167 C11orf91Q3C1V1 193 aa10.26□□□□□ -0.77
PRPF40A-206ENST00000471167 GSX2Q9BZM3 304 aa10.26□□□□□ -0.77
PRPF40A-206ENST00000471167 MICAL2O94851 1124 aa10.25□□□□□ -0.77
PRPF40A-206ENST00000471167 IDH3AP50213 366 aa10.25□□□□□ -0.77
PRPF40A-206ENST00000471167 MKNK1Q9BUB5 465 aa10.25□□□□□ -0.77
PRPF40A-206ENST00000471167 USP20Q9Y2K6 914 aa10.25□□□□□ -0.77
PRPF40A-206ENST00000471167 STARD13Q9Y3M8 1113 aa10.25□□□□□ -0.77
PRPF40A-206ENST00000471167 SIN3BO75182 1162 aa10.24□□□□□ -0.77
PRPF40A-206ENST00000471167 ITGB2P05107 769 aa10.24□□□□□ -0.77
PRPF40A-206ENST00000471167 DGKGP49619 791 aa10.24□□□□□ -0.77
PRPF40A-206ENST00000471167 ETFBKMTQ8IXQ9 262 aa10.24□□□□□ -0.77
PRPF40A-206ENST00000471167 COL26A1Q96A83 441 aa10.24□□□□□ -0.77
PRPF40A-206ENST00000471167 IFT43Q96FT9 208 aa10.24□□□□□ -0.77
PRPF40A-206ENST00000471167 SCARF2Q96GP6 870 aaPredicted RBP10.24□□□□□ -0.77
PRPF40A-206ENST00000471167 ADARB2-AS1A8MUL3 147 aa10.23□□□□□ -0.77
PRPF40A-206ENST00000471167 COL8A1P27658 744 aa10.23□□□□□ -0.77
PRPF40A-206ENST00000471167 NAA30Q147X3 362 aaPredicted RBP10.23□□□□□ -0.77
PRPF40A-206ENST00000471167 CHSY3Q70JA7 882 aa10.23□□□□□ -0.77
PRPF40A-206ENST00000471167 SUV39H2Q9H5I1 410 aa10.23□□□□□ -0.77
PRPF40A-206ENST00000471167 SEPT3Q9UH03 358 aa10.23□□□□□ -0.77
PRPF40A-206ENST00000471167 COL9A3Q14050 684 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-206ENST00000471167 HIF1AQ16665 826 aa10.22□□□□□ -0.77
PRPF40A-206ENST00000471167 PHLDB3Q6NSJ2 640 aa10.22□□□□□ -0.77
PRPF40A-206ENST00000471167 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-206ENST00000471167 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
PRPF40A-206ENST00000471167 ELOA3CA0A087WX78 387 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 ELOA3DA6NLF2 546 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 GDF11O95390 407 aa10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 ATP2B4P23634 1241 aa10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 ELOA3BQ3SY89 546 aa10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 ELOA3Q8NG57 546 aa10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 VTI1AQ96AJ9 217 aa10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 ZFATQ9P243 1243 aa10.21□□□□□ -0.77
PRPF40A-206ENST00000471167 ZBTB39O15060 712 aa10.2□□□□□ -0.78
PRPF40A-206ENST00000471167 C16orf46Q6P387 395 aa10.2□□□□□ -0.78
PRPF40A-206ENST00000471167 TREML1Q86YW5 311 aa10.2□□□□□ -0.78
PRPF40A-206ENST00000471167 BHMTQ93088 406 aa10.2□□□□□ -0.78
PRPF40A-206ENST00000471167 TMEM151AQ8N4L1 468 aa10.19□□□□□ -0.78
PRPF40A-206ENST00000471167 KCTD17Q8N5Z5 321 aa10.19□□□□□ -0.78
PRPF40A-206ENST00000471167 DCAF5Q96JK2 942 aa10.19□□□□□ -0.78
PRPF40A-206ENST00000471167 RRAGCQ9HB90 399 aa10.19□□□□□ -0.78
PRPF40A-206ENST00000471167 SSFA2P28290 1259 aa10.18□□□□□ -0.78
PRPF40A-206ENST00000471167 KANK3Q6NY19 840 aa10.18□□□□□ -0.78
PRPF40A-206ENST00000471167 C8orf86Q6ZUL3 223 aa10.18□□□□□ -0.78
PRPF40A-206ENST00000471167 TRIM11Q96F44 468 aa10.18□□□□□ -0.78
PRPF40A-206ENST00000471167 RTCBQ9Y3I0 505 aaKnown RBP10.18□□□□□ -0.78
PRPF40A-206ENST00000471167 KCNMB2Q9Y691 235 aa10.18□□□□□ -0.78
PRPF40A-206ENST00000471167 RNF225M0QZC1 329 aaPredicted RBP10.17□□□□□ -0.78
PRPF40A-206ENST00000471167 AMPD1P23109 780 aa10.17□□□□□ -0.78
PRPF40A-206ENST00000471167 TARSP26639 723 aaKnown RBP10.17□□□□□ -0.78
PRPF40A-206ENST00000471167 ARSDP51689 593 aa10.17□□□□□ -0.78
PRPF40A-206ENST00000471167 C20orf204Q6ZNR8 217 aa10.17□□□□□ -0.78
PRPF40A-206ENST00000471167 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.17□□□□□ -0.78
PRPF40A-206ENST00000471167 ADH7P40394 386 aa10.16□□□□□ -0.78
PRPF40A-206ENST00000471167 CCINQ13939 588 aa10.16□□□□□ -0.78
PRPF40A-206ENST00000471167 ZBTB42B2RXF5 422 aa10.15□□□□□ -0.78
PRPF40A-206ENST00000471167 ALBP02768 609 aa10.15□□□□□ -0.78
PRPF40A-206ENST00000471167 NFKB1P19838 968 aa10.15□□□□□ -0.78
PRPF40A-206ENST00000471167 TRIP4Q15650 581 aaPredicted RBP10.15□□□□□ -0.78
PRPF40A-206ENST00000471167 MKL2Q9ULH7 1088 aa10.15□□□□□ -0.78
PRPF40A-206ENST00000471167 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.15□□□□□ -0.78
PRPF40A-206ENST00000471167 KRBA1A5PL33 1030 aa10.14□□□□□ -0.79
PRPF40A-206ENST00000471167 PHF20L1A8MW92 1017 aa10.14□□□□□ -0.79
PRPF40A-206ENST00000471167 PTCD1O75127 700 aaKnown RBP10.14□□□□□ -0.79
PRPF40A-206ENST00000471167 SASH3O75995 380 aa10.14□□□□□ -0.79
PRPF40A-206ENST00000471167 MICALL1Q8N3F8 863 aa10.14□□□□□ -0.79
PRPF40A-206ENST00000471167 ARID3AQ99856 593 aa10.14□□□□□ -0.79
PRPF40A-206ENST00000471167 NAGPAQ9UK23 515 aa10.14□□□□□ -0.79
PRPF40A-206ENST00000471167 EGFRP00533 1210 aa10.13□□□□□ -0.79
PRPF40A-206ENST00000471167 KRT25Q7Z3Z0 450 aa10.13□□□□□ -0.79
PRPF40A-206ENST00000471167 RGL4Q8IZJ4 473 aa10.13□□□□□ -0.79
PRPF40A-206ENST00000471167 BRD2P25440 801 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-206ENST00000471167 PODNQ7Z5L7 613 aa10.12□□□□□ -0.79
PRPF40A-206ENST00000471167 DNAJB12Q9NXW2 375 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-206ENST00000471167 SLC6A14Q9UN76 642 aa10.12□□□□□ -0.79
PRPF40A-206ENST00000471167 GNB5O14775 395 aa10.11□□□□□ -0.79
PRPF40A-206ENST00000471167 MAP3K6O95382 1288 aa10.11□□□□□ -0.79
PRPF40A-206ENST00000471167 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
PRPF40A-206ENST00000471167 EFCC1Q9HA90 598 aa10.11□□□□□ -0.79
PRPF40A-206ENST00000471167 C11orf16Q9NQ32 467 aa10.11□□□□□ -0.79
PRPF40A-206ENST00000471167 STIM2Q9P246 746 aa10.11□□□□□ -0.79
PRPF40A-206ENST00000471167 M0R082 166 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms