RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
CLK2-204ENST00000471047 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
CLK2-204ENST00000471047 SLC34A2O95436 690 aa12.42□□□□□ -0.42
CLK2-204ENST00000471047 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
CLK2-204ENST00000471047 PIP4K2AP48426 406 aaPredicted RBP12.42□□□□□ -0.42
CLK2-204ENST00000471047 DALRD3Q5D0E6 543 aaKnown RBP12.42□□□□□ -0.42
CLK2-204ENST00000471047 BEND3Q5T5X7 828 aa12.42□□□□□ -0.42
CLK2-204ENST00000471047 COPS6Q7L5N1 327 aa12.42□□□□□ -0.42
CLK2-204ENST00000471047 XAGE3Q8WTP9 111 aa12.42□□□□□ -0.42
CLK2-204ENST00000471047 PIM2Q9P1W9 311 aa12.42□□□□□ -0.42
CLK2-204ENST00000471047 RTCBQ9Y3I0 505 aaKnown RBP12.42□□□□□ -0.42
CLK2-204ENST00000471047 PCDHB15Q9Y5E8 787 aa12.42□□□□□ -0.42
CLK2-204ENST00000471047 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
CLK2-204ENST00000471047 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
CLK2-204ENST00000471047 PARP3Q9Y6F1 533 aa12.41□□□□□ -0.42
CLK2-204ENST00000471047 CHRNA5P30532 468 aa12.4□□□□□ -0.42
CLK2-204ENST00000471047 RASSF7Q02833 373 aa12.4□□□□□ -0.42
CLK2-204ENST00000471047 AIMP1Q12904 312 aaKnown RBP12.4□□□□□ -0.42
CLK2-204ENST00000471047 ANKRD13DQ6ZTN6 518 aa12.4□□□□□ -0.42
CLK2-204ENST00000471047 SRCIN1Q9C0H9 1055 aa12.4□□□□□ -0.42
CLK2-204ENST00000471047 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
CLK2-204ENST00000471047 C4AP0C0L4 1744 aa12.4□□□□□ -0.43
CLK2-204ENST00000471047 DDR1Q08345 913 aa12.39□□□□□ -0.43
CLK2-204ENST00000471047 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
CLK2-204ENST00000471047 LINS1Q8NG48 757 aa12.39□□□□□ -0.43
CLK2-204ENST00000471047 PLBD2Q8NHP8 589 aa12.39□□□□□ -0.43
CLK2-204ENST00000471047 MEIS3Q99687 375 aa12.39□□□□□ -0.43
CLK2-204ENST00000471047 BRCA1P38398 1863 aaKnown RBP12.39□□□□□ -0.43
CLK2-204ENST00000471047 MYH14Q7Z406 1995 aaKnown RBP12.39□□□□□ -0.43
CLK2-204ENST00000471047 ALDH1L1O75891 902 aa12.38□□□□□ -0.43
CLK2-204ENST00000471047 IGHDP01880 384 aa12.38□□□□□ -0.43
CLK2-204ENST00000471047 RFC4P35249 363 aa12.38□□□□□ -0.43
CLK2-204ENST00000471047 IL6STP40189 918 aaPredicted RBP12.38□□□□□ -0.43
CLK2-204ENST00000471047 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
CLK2-204ENST00000471047 TTLL7Q6ZT98 887 aa12.38□□□□□ -0.43
CLK2-204ENST00000471047 CENPQQ7L2Z9 268 aaPredicted RBP12.38□□□□□ -0.43
CLK2-204ENST00000471047 RIC3Q7Z5B4 369 aa12.38□□□□□ -0.43
CLK2-204ENST00000471047 METTL22Q9BUU2 404 aaPredicted RBP12.38□□□□□ -0.43
CLK2-204ENST00000471047 USP44Q9H0E7 712 aa12.38□□□□□ -0.43
CLK2-204ENST00000471047 SRP68Q9UHB9 627 aaKnown RBP12.38□□□□□ -0.43
CLK2-204ENST00000471047 ZBTB1Q9Y2K1 713 aa12.38□□□□□ -0.43
CLK2-204ENST00000471047 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
CLK2-204ENST00000471047 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
CLK2-204ENST00000471047 GNAI3P08754 354 aa12.37□□□□□ -0.43
CLK2-204ENST00000471047 ADRA2BP18089 450 aa12.37□□□□□ -0.43
CLK2-204ENST00000471047 CRKLP46109 303 aaKnown RBP12.37□□□□□ -0.43
CLK2-204ENST00000471047 UTYO14607 1347 aa12.37□□□□□ -0.43
CLK2-204ENST00000471047 TNRC6CQ9HCJ0 1690 aaKnown RBP12.36□□□□□ -0.43
CLK2-204ENST00000471047 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
CLK2-204ENST00000471047 RC3H1Q5TC82 1133 aaKnown RBP12.36□□□□□ -0.43
CLK2-204ENST00000471047 RWDD1Q9H446 243 aaPredicted RBP12.36□□□□□ -0.43
CLK2-204ENST00000471047 ARFGEF1Q9Y6D6 1849 aa12.36□□□□□ -0.43
CLK2-204ENST00000471047 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
CLK2-204ENST00000471047 GLTPD2A6NH11 291 aa12.35□□□□□ -0.43
CLK2-204ENST00000471047 VEGFAP15692 232 aaPredicted RBP12.35□□□□□ -0.43
CLK2-204ENST00000471047 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
CLK2-204ENST00000471047 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
CLK2-204ENST00000471047 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
CLK2-204ENST00000471047 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
CLK2-204ENST00000471047 MKRN1Q9UHC7 482 aaKnown RBP12.35□□□□□ -0.43
CLK2-204ENST00000471047 AFDNP55196 1824 aaKnown RBP12.34□□□□□ -0.43
CLK2-204ENST00000471047 NEURL1BA8MQ27 555 aa12.34□□□□□ -0.43
CLK2-204ENST00000471047 POTECB2RU33 542 aa12.34□□□□□ -0.43
CLK2-204ENST00000471047 FOXN1O15353 648 aa12.34□□□□□ -0.43
CLK2-204ENST00000471047 GNAI2P04899 355 aa12.34□□□□□ -0.43
CLK2-204ENST00000471047 CEP85Q6P2H3 762 aa12.34□□□□□ -0.43
CLK2-204ENST00000471047 RPAP2Q8IXW5 612 aaPredicted RBP12.34□□□□□ -0.43
CLK2-204ENST00000471047 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
CLK2-204ENST00000471047 MYD88Q99836 296 aa12.34□□□□□ -0.43
CLK2-204ENST00000471047 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
CLK2-204ENST00000471047 ANKRD36CQ5JPF3 1778 aa12.33□□□□□ -0.44
CLK2-204ENST00000471047 ERVV-1B6SEH8 477 aa12.33□□□□□ -0.44
CLK2-204ENST00000471047 NBPF7P0C2Y1 421 aaPredicted RBP12.33□□□□□ -0.44
CLK2-204ENST00000471047 UBTFL1P0CB47 393 aaPredicted RBP12.33□□□□□ -0.44
CLK2-204ENST00000471047 TRIM28Q13263 835 aaKnown RBP12.33□□□□□ -0.44
CLK2-204ENST00000471047 GCKRQ14397 625 aa12.33□□□□□ -0.44
CLK2-204ENST00000471047 GIGYF2Q6Y7W6 1299 aaKnown RBP12.33□□□□□ -0.44
CLK2-204ENST00000471047 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
CLK2-204ENST00000471047 ZBTB3Q9H5J0 574 aa12.33□□□□□ -0.44
CLK2-204ENST00000471047 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
CLK2-204ENST00000471047 ZC3H4Q9UPT8 1303 aaKnown RBP12.33□□□□□ -0.44
CLK2-204ENST00000471047 NUP98P52948 1817 aa12.32□□□□□ -0.44
CLK2-204ENST00000471047 COL15A1P39059 1388 aa12.32□□□□□ -0.44
CLK2-204ENST00000471047 GRM8O00222 908 aa12.32□□□□□ -0.44
CLK2-204ENST00000471047 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
CLK2-204ENST00000471047 LMNB1P20700 586 aa12.32□□□□□ -0.44
CLK2-204ENST00000471047 SMC5Q8IY18 1101 aa12.32□□□□□ -0.44
CLK2-204ENST00000471047 ISCA1Q9BUE6 129 aa12.32□□□□□ -0.44
CLK2-204ENST00000471047 BCORQ6W2J9 1755 aa12.32□□□□□ -0.44
CLK2-204ENST00000471047 TCIRG1Q13488 830 aa12.31□□□□□ -0.44
CLK2-204ENST00000471047 DZIP3Q86Y13 1208 aaKnown RBP12.31□□□□□ -0.44
CLK2-204ENST00000471047 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
CLK2-204ENST00000471047 C9orf78Q9NZ63 289 aaPredicted RBP12.31□□□□□ -0.44
CLK2-204ENST00000471047 ZNF330Q9Y3S2 320 aaPredicted RBP12.31□□□□□ -0.44
CLK2-204ENST00000471047 SBF1O95248 1867 aa12.31□□□□□ -0.44
CLK2-204ENST00000471047 ATP5J2-PTCD1G3V325 749 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 NFKBIEO00221 500 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 RGL2O15211 777 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms