RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 FKBP4Q02790 459 aaKnown RBP eCLIP15.32■□□□□ 0.04
HDLBP-232ENST00000470482 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
HDLBP-232ENST00000470482 SLC51AQ86UW1 340 aa15.32■□□□□ 0.04
HDLBP-232ENST00000470482 ISCA1Q9BUE6 129 aa15.32■□□□□ 0.04
HDLBP-232ENST00000470482 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
HDLBP-232ENST00000470482 VEGFAP15692 232 aaPredicted RBP15.31■□□□□ 0.04
HDLBP-232ENST00000470482 FSTL1Q12841 308 aa15.31■□□□□ 0.04
HDLBP-232ENST00000470482 TRIM28Q13263 835 aaKnown RBP15.31■□□□□ 0.04
HDLBP-232ENST00000470482 CCDC27Q2M243 656 aa15.31■□□□□ 0.04
HDLBP-232ENST00000470482 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
HDLBP-232ENST00000470482 SYNE4Q8N205 404 aa15.31■□□□□ 0.04
HDLBP-232ENST00000470482 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
HDLBP-232ENST00000470482 RNF123Q5XPI4 1314 aa15.31■□□□□ 0.04
HDLBP-232ENST00000470482 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
HDLBP-232ENST00000470482 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
HDLBP-232ENST00000470482 NPHP1O15259 732 aa15.3■□□□□ 0.04
HDLBP-232ENST00000470482 CACNA1SQ13698 1873 aa15.3■□□□□ 0.04
HDLBP-232ENST00000470482 PPP1R42Q7Z4L9 355 aa15.3■□□□□ 0.04
HDLBP-232ENST00000470482 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
HDLBP-232ENST00000470482 C8orf58Q8NAV2 365 aa15.3■□□□□ 0.04
HDLBP-232ENST00000470482 PLBD2Q8NHP8 589 aa15.3■□□□□ 0.04
HDLBP-232ENST00000470482 PSMD1Q99460 953 aa15.3■□□□□ 0.04
HDLBP-232ENST00000470482 UTP14AQ9BVJ6 771 aaKnown RBP15.3■□□□□ 0.04
HDLBP-232ENST00000470482 DBF4Q9UBU7 674 aaPredicted RBP15.3■□□□□ 0.04
HDLBP-232ENST00000470482 GNAI1P63096 354 aa15.29■□□□□ 0.04
HDLBP-232ENST00000470482 HDGFL1Q5TGJ6 251 aa15.29■□□□□ 0.04
HDLBP-232ENST00000470482 CC2D2BQ6DHV5 1058 aa15.29■□□□□ 0.04
HDLBP-232ENST00000470482 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
HDLBP-232ENST00000470482 L3MBTL3Q96JM7 780 aaPredicted RBP15.29■□□□□ 0.04
HDLBP-232ENST00000470482 LAS1LQ9Y4W2 734 aaKnown RBP15.29■□□□□ 0.04
HDLBP-232ENST00000470482 COL4A5P29400 1685 aa15.28■□□□□ 0.04
HDLBP-232ENST00000470482 FZD9O00144 591 aa15.28■□□□□ 0.04
HDLBP-232ENST00000470482 GTF2E1P29083 439 aaPredicted RBP15.28■□□□□ 0.04
HDLBP-232ENST00000470482 APLP1P51693 650 aa15.28■□□□□ 0.04
HDLBP-232ENST00000470482 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
HDLBP-232ENST00000470482 HSP90AB3PQ58FF7 597 aa15.28■□□□□ 0.04
HDLBP-232ENST00000470482 HYPKQ9NX55 129 aa15.28■□□□□ 0.04
HDLBP-232ENST00000470482 ANKRD36CQ5JPF3 1778 aa15.27■□□□□ 0.04
HDLBP-232ENST00000470482 DDNO94850 711 aaPredicted RBP15.27■□□□□ 0.04
HDLBP-232ENST00000470482 WWC1Q8IX03 1113 aa15.27■□□□□ 0.04
HDLBP-232ENST00000470482 ZNF277Q9NRM2 450 aaPredicted RBP15.27■□□□□ 0.04
HDLBP-232ENST00000470482 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
HDLBP-232ENST00000470482 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
HDLBP-232ENST00000470482 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
HDLBP-232ENST00000470482 TSPYL6Q8N831 410 aa15.26■□□□□ 0.03
HDLBP-232ENST00000470482 NLRP3Q96P20 1036 aa15.26■□□□□ 0.03
HDLBP-232ENST00000470482 HCLS1P14317 486 aaPredicted RBP15.25■□□□□ 0.03
HDLBP-232ENST00000470482 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
HDLBP-232ENST00000470482 RTFDC1Q9BY42 306 aaPredicted RBP15.25■□□□□ 0.03
HDLBP-232ENST00000470482 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
HDLBP-232ENST00000470482 ATP6V0A2Q9Y487 856 aa15.25■□□□□ 0.03
HDLBP-232ENST00000470482 LAMB2P55268 1798 aa15.24■□□□□ 0.03
HDLBP-232ENST00000470482 ABCC4O15439 1325 aa15.24■□□□□ 0.03
HDLBP-232ENST00000470482 IL16Q14005 1332 aa15.24■□□□□ 0.03
HDLBP-232ENST00000470482 SH3TC1Q8TE82 1336 aa15.24■□□□□ 0.03
HDLBP-232ENST00000470482 ZNF541Q9H0D2 1346 aa15.24■□□□□ 0.03
HDLBP-232ENST00000470482 SF3B3Q15393 1217 aaKnown RBP15.24■□□□□ 0.03
HDLBP-232ENST00000470482 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
HDLBP-232ENST00000470482 RPGRQ92834 1020 aaKnown RBP15.24■□□□□ 0.03
HDLBP-232ENST00000470482 RBM17Q96I25 401 aaKnown RBP15.24■□□□□ 0.03
HDLBP-232ENST00000470482 BBOX1O75936 387 aa15.23■□□□□ 0.03
HDLBP-232ENST00000470482 TRMT112Q9UI30 125 aaKnown RBP15.23■□□□□ 0.03
HDLBP-232ENST00000470482 PCNTO95613 3336 aa15.23■□□□□ 0.03
HDLBP-232ENST00000470482 ELL2O00472 640 aaPredicted RBP15.22■□□□□ 0.03
HDLBP-232ENST00000470482 POTEIP0CG38 1075 aa15.22■□□□□ 0.03
HDLBP-232ENST00000470482 POTEJP0CG39 1038 aa15.22■□□□□ 0.03
HDLBP-232ENST00000470482 SP8Q8IXZ3 490 aa15.22■□□□□ 0.03
HDLBP-232ENST00000470482 C16orf71Q8IYS4 520 aaPredicted RBP15.22■□□□□ 0.03
HDLBP-232ENST00000470482 VPS33BQ9H267 617 aa15.22■□□□□ 0.03
HDLBP-232ENST00000470482 COL4A1P02462 1669 aa15.22■□□□□ 0.03
HDLBP-232ENST00000470482 DDX60Q8IY21 1712 aaKnown RBP15.21■□□□□ 0.03
HDLBP-232ENST00000470482 ATP5J2-PTCD1G3V325 749 aa15.21■□□□□ 0.03
HDLBP-232ENST00000470482 PPEF1O14829 653 aaPredicted RBP15.21■□□□□ 0.03
HDLBP-232ENST00000470482 HTRA3P83110 453 aa15.21■□□□□ 0.03
HDLBP-232ENST00000470482 JMYQ8N9B5 988 aa15.21■□□□□ 0.03
HDLBP-232ENST00000470482 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
HDLBP-232ENST00000470482 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
HDLBP-232ENST00000470482 SCN4AP35499 1836 aa15.2■□□□□ 0.02
HDLBP-232ENST00000470482 TSR2Q969E8 191 aaKnown RBP15.2■□□□□ 0.02
HDLBP-232ENST00000470482 ADAMTSL1Q8N6G6 1762 aa15.2■□□□□ 0.02
HDLBP-232ENST00000470482 TAF1P21675 1872 aa15.19■□□□□ 0.02
HDLBP-232ENST00000470482 ITGBL1O95965 494 aaPredicted RBP15.19■□□□□ 0.02
HDLBP-232ENST00000470482 GRAPQ13588 217 aa15.19■□□□□ 0.02
HDLBP-232ENST00000470482 CCDC30Q5VVM6 783 aa15.19■□□□□ 0.02
HDLBP-232ENST00000470482 GPC2Q8N158 579 aa15.19■□□□□ 0.02
HDLBP-232ENST00000470482 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
HDLBP-232ENST00000470482 METTL22Q9BUU2 404 aaPredicted RBP15.19■□□□□ 0.02
HDLBP-232ENST00000470482 MRS2Q9HD23 443 aa15.19■□□□□ 0.02
HDLBP-232ENST00000470482 PASKQ96RG2 1323 aa15.18■□□□□ 0.02
HDLBP-232ENST00000470482 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
HDLBP-232ENST00000470482 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
HDLBP-232ENST00000470482 ZBTB38Q8NAP3 1195 aaPredicted RBP15.18■□□□□ 0.02
HDLBP-232ENST00000470482 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
HDLBP-232ENST00000470482 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
HDLBP-232ENST00000470482 DUOX1Q9NRD9 1551 aa15.18■□□□□ 0.02
HDLBP-232ENST00000470482 ANP32CO43423 234 aa15.17■□□□□ 0.02
HDLBP-232ENST00000470482 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
HDLBP-232ENST00000470482 G2E3Q7L622 706 aa15.17■□□□□ 0.02
HDLBP-232ENST00000470482 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
HDLBP-232ENST00000470482 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms