RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 CNBD1Q8NA66 436 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 NYXQ9GZU5 481 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 PXDNLA1KZ92 1463 aa13.39□□□□□ -0.27
SMC1A-206ENST00000470241 ALDH1L1O75891 902 aa13.38□□□□□ -0.27
SMC1A-206ENST00000470241 GCKRQ14397 625 aa13.38□□□□□ -0.27
SMC1A-206ENST00000470241 ERFEQ4G0M1 354 aa13.38□□□□□ -0.27
SMC1A-206ENST00000470241 SYNE4Q8N205 404 aa13.38□□□□□ -0.27
SMC1A-206ENST00000470241 CLUAP1Q96AJ1 413 aa13.38□□□□□ -0.27
SMC1A-206ENST00000470241 TRMT112Q9UI30 125 aaKnown RBP13.38□□□□□ -0.27
SMC1A-206ENST00000470241 C10orf71Q711Q0 1435 aa13.38□□□□□ -0.27
SMC1A-206ENST00000470241 ABCC12Q96J65 1359 aa13.37□□□□□ -0.27
SMC1A-206ENST00000470241 NRXN2Q9P2S2 1712 aa13.37□□□□□ -0.27
SMC1A-206ENST00000470241 RLBP1P12271 317 aa13.37□□□□□ -0.27
SMC1A-206ENST00000470241 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
SMC1A-206ENST00000470241 INTS3Q68E01 1043 aaKnown RBP13.37□□□□□ -0.27
SMC1A-206ENST00000470241 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
SMC1A-206ENST00000470241 JARID2Q92833 1246 aaPredicted RBP13.37□□□□□ -0.27
SMC1A-206ENST00000470241 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
SMC1A-206ENST00000470241 RNF123Q5XPI4 1314 aa13.37□□□□□ -0.27
SMC1A-206ENST00000470241 SH3TC1Q8TE82 1336 aa13.37□□□□□ -0.27
SMC1A-206ENST00000470241 H7C1W4 665 aa13.36□□□□□ -0.27
SMC1A-206ENST00000470241 PCCAP05165 728 aaPredicted RBP13.36□□□□□ -0.27
SMC1A-206ENST00000470241 CASP7P55210 303 aa13.36□□□□□ -0.27
SMC1A-206ENST00000470241 RRP1P56182 461 aaKnown RBP13.36□□□□□ -0.27
SMC1A-206ENST00000470241 ST5P78524 1137 aa13.36□□□□□ -0.27
SMC1A-206ENST00000470241 SLC10A5Q5PT55 438 aa13.36□□□□□ -0.27
SMC1A-206ENST00000470241 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
SMC1A-206ENST00000470241 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
SMC1A-206ENST00000470241 PANK1Q8TE04 598 aa13.36□□□□□ -0.27
SMC1A-206ENST00000470241 FAM89AQ96GI7 184 aa13.36□□□□□ -0.27
SMC1A-206ENST00000470241 LRP5O75197 1615 aa13.35□□□□□ -0.27
SMC1A-206ENST00000470241 NPHP1O15259 732 aa13.35□□□□□ -0.27
SMC1A-206ENST00000470241 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
SMC1A-206ENST00000470241 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
SMC1A-206ENST00000470241 FTSJ3Q8IY81 847 aaKnown RBP13.35□□□□□ -0.27
SMC1A-206ENST00000470241 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.35□□□□□ -0.27
SMC1A-206ENST00000470241 BRIP1Q9BX63 1249 aa13.35□□□□□ -0.27
SMC1A-206ENST00000470241 PPP1R1BQ9UD71 204 aaPredicted RBP13.35□□□□□ -0.27
SMC1A-206ENST00000470241 CD2APQ9Y5K6 639 aa13.35□□□□□ -0.27
SMC1A-206ENST00000470241 GRM8O00222 908 aa13.34□□□□□ -0.27
SMC1A-206ENST00000470241 IRS4O14654 1257 aaPredicted RBP13.34□□□□□ -0.27
SMC1A-206ENST00000470241 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
SMC1A-206ENST00000470241 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
SMC1A-206ENST00000470241 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
SMC1A-206ENST00000470241 UBE3BQ7Z3V4 1068 aa13.34□□□□□ -0.27
SMC1A-206ENST00000470241 FHDC1Q9C0D6 1143 aaPredicted RBP13.34□□□□□ -0.27
SMC1A-206ENST00000470241 USP44Q9H0E7 712 aa13.34□□□□□ -0.27
SMC1A-206ENST00000470241 UTYO14607 1347 aa13.34□□□□□ -0.27
SMC1A-206ENST00000470241 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
SMC1A-206ENST00000470241 RIC1Q4ADV7 1423 aa13.33□□□□□ -0.28
SMC1A-206ENST00000470241 KLRG2A4D1S0 409 aaPredicted RBP13.33□□□□□ -0.28
SMC1A-206ENST00000470241 NBPF7P0C2Y1 421 aaPredicted RBP13.33□□□□□ -0.28
SMC1A-206ENST00000470241 MS4A1P11836 297 aa13.33□□□□□ -0.28
SMC1A-206ENST00000470241 PDE3AQ14432 1141 aa13.33□□□□□ -0.28
SMC1A-206ENST00000470241 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
SMC1A-206ENST00000470241 C9orf78Q9NZ63 289 aaPredicted RBP13.33□□□□□ -0.28
SMC1A-206ENST00000470241 AFDNP55196 1824 aaKnown RBP13.33□□□□□ -0.28
SMC1A-206ENST00000470241 PDE6BP35913 854 aa13.32□□□□□ -0.28
SMC1A-206ENST00000470241 MEIS3Q99687 375 aa13.32□□□□□ -0.28
SMC1A-206ENST00000470241 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
SMC1A-206ENST00000470241 DPEP1P16444 411 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 CHRNA5P30532 468 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 TGFB2P61812 414 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 C2CD5Q86YS7 1000 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 ITPRIPQ8IWB1 547 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 NLGN2Q8NFZ4 835 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 KAZALD1Q96I82 304 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 NLRP3Q96P20 1036 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 SYT17Q9BSW7 474 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
SMC1A-206ENST00000470241 PDE8AO60658 829 aa13.3□□□□□ -0.28
SMC1A-206ENST00000470241 KCNA3P22001 575 aa13.3□□□□□ -0.28
SMC1A-206ENST00000470241 MVPQ14764 893 aaKnown RBP13.3□□□□□ -0.28
SMC1A-206ENST00000470241 CRY2Q49AN0 593 aa13.3□□□□□ -0.28
SMC1A-206ENST00000470241 EPHA10Q5JZY3 1008 aa13.3□□□□□ -0.28
SMC1A-206ENST00000470241 SUCLG2Q96I99 432 aa13.3□□□□□ -0.28
SMC1A-206ENST00000470241 COG6Q9Y2V7 657 aa13.3□□□□□ -0.28
SMC1A-206ENST00000470241 TNRC6CQ9HCJ0 1690 aaKnown RBP13.3□□□□□ -0.28
SMC1A-206ENST00000470241 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
SMC1A-206ENST00000470241 A0A0G2JLW4 131 aa13.29□□□□□ -0.28
SMC1A-206ENST00000470241 H0YIN7 160 aa13.29□□□□□ -0.28
SMC1A-206ENST00000470241 ZBTB7BO15156 539 aaPredicted RBP13.29□□□□□ -0.28
SMC1A-206ENST00000470241 SRGNP10124 158 aa13.29□□□□□ -0.28
SMC1A-206ENST00000470241 HSP90B1P14625 803 aaKnown RBP13.29□□□□□ -0.28
SMC1A-206ENST00000470241 CTSWP56202 376 aa13.29□□□□□ -0.28
SMC1A-206ENST00000470241 FOXO4P98177 505 aa13.29□□□□□ -0.28
SMC1A-206ENST00000470241 SF3B3Q15393 1217 aaKnown RBP13.29□□□□□ -0.28
SMC1A-206ENST00000470241 PDZRN3Q9UPQ7 1066 aa13.29□□□□□ -0.28
SMC1A-206ENST00000470241 KIF13BQ9NQT8 1826 aa13.28□□□□□ -0.28
SMC1A-206ENST00000470241 ANKRD31Q8N7Z5 1873 aa13.28□□□□□ -0.28
SMC1A-206ENST00000470241 UBTFL1P0CB47 393 aaPredicted RBP13.28□□□□□ -0.28
SMC1A-206ENST00000470241 TTLL11Q8NHH1 800 aa13.28□□□□□ -0.28
SMC1A-206ENST00000470241 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.29
SMC1A-206ENST00000470241 CSF1RP07333 972 aa13.27□□□□□ -0.29
SMC1A-206ENST00000470241 GNAI3P08754 354 aa13.27□□□□□ -0.29
SMC1A-206ENST00000470241 NPR1P16066 1061 aa13.27□□□□□ -0.29
SMC1A-206ENST00000470241 HOXA10P31260 410 aaPredicted RBP13.27□□□□□ -0.29
SMC1A-206ENST00000470241 STYK1Q6J9G0 422 aa13.27□□□□□ -0.29
SMC1A-206ENST00000470241 ANKRD44Q8N8A2 993 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms