RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PER1O15534 1290 aaPredicted RBP25.36■■□□□ 1.65
NCKIPSD-209ENST00000470006 CC2D2BQ6DHV5 1058 aa25.36■■□□□ 1.65
NCKIPSD-209ENST00000470006 MCM10Q7L590 875 aa25.36■■□□□ 1.65
NCKIPSD-209ENST00000470006 NGEFQ8N5V2 710 aa25.36■■□□□ 1.65
NCKIPSD-209ENST00000470006 TRAF5O00463 557 aa25.35■■□□□ 1.65
NCKIPSD-209ENST00000470006 TCERG1O14776 1098 aaKnown RBP25.35■■□□□ 1.65
NCKIPSD-209ENST00000470006 NUTM1Q86Y26 1132 aa25.35■■□□□ 1.65
NCKIPSD-209ENST00000470006 NYXQ9GZU5 481 aa25.35■■□□□ 1.65
NCKIPSD-209ENST00000470006 TRPM7Q96QT4 1865 aa25.34■■□□□ 1.65
NCKIPSD-209ENST00000470006 RGL2O15211 777 aa25.34■■□□□ 1.65
NCKIPSD-209ENST00000470006 AOC2O75106 756 aa25.33■■□□□ 1.65
NCKIPSD-209ENST00000470006 SCNN1DP51172 638 aa25.33■■□□□ 1.65
NCKIPSD-209ENST00000470006 USP50Q70EL3 339 aaPredicted RBP25.33■■□□□ 1.65
NCKIPSD-209ENST00000470006 CFAP53Q96M91 514 aa25.33■■□□□ 1.65
NCKIPSD-209ENST00000470006 LTBP1Q14766 1721 aa25.32■■□□□ 1.64
NCKIPSD-209ENST00000470006 CST9Q5W186 159 aa25.32■■□□□ 1.64
NCKIPSD-209ENST00000470006 NIM1KQ8IY84 436 aa25.32■■□□□ 1.64
NCKIPSD-209ENST00000470006 RSPH6AQ9H0K4 717 aa25.32■■□□□ 1.64
NCKIPSD-209ENST00000470006 TLL2Q9Y6L7 1015 aa25.31■■□□□ 1.64
NCKIPSD-209ENST00000470006 DCTN1Q14203 1278 aa25.3■■□□□ 1.64
NCKIPSD-209ENST00000470006 CRY2Q49AN0 593 aa25.3■■□□□ 1.64
NCKIPSD-209ENST00000470006 GRIPAP1Q4V328 841 aa25.3■■□□□ 1.64
NCKIPSD-209ENST00000470006 TMX4Q9H1E5 349 aaPredicted RBP25.3■■□□□ 1.64
NCKIPSD-209ENST00000470006 NUDCQ9Y266 331 aa25.3■■□□□ 1.64
NCKIPSD-209ENST00000470006 ABCC12Q96J65 1359 aa25.3■■□□□ 1.64
NCKIPSD-209ENST00000470006 COL4A5P29400 1685 aa25.29■■□□□ 1.64
NCKIPSD-209ENST00000470006 MAP2K2P36507 400 aa25.29■■□□□ 1.64
NCKIPSD-209ENST00000470006 RBM17Q96I25 401 aaKnown RBP25.29■■□□□ 1.64
NCKIPSD-209ENST00000470006 THSD7BQ9C0I4 1608 aa25.29■■□□□ 1.64
NCKIPSD-209ENST00000470006 PPEF1O14829 653 aaPredicted RBP25.28■■□□□ 1.64
NCKIPSD-209ENST00000470006 RGS19P49795 217 aa25.28■■□□□ 1.64
NCKIPSD-209ENST00000470006 KIF6Q6ZMV9 814 aa25.28■■□□□ 1.64
NCKIPSD-209ENST00000470006 PPIP5K2O43314 1243 aa25.27■■□□□ 1.64
NCKIPSD-209ENST00000470006 CELF2O95319 508 aaKnown RBP25.27■■□□□ 1.64
NCKIPSD-209ENST00000470006 U2AF1L5P0DN76 240 aaPredicted RBP25.27■■□□□ 1.64
NCKIPSD-209ENST00000470006 GPTP24298 496 aa25.27■■□□□ 1.64
NCKIPSD-209ENST00000470006 U2AF1Q01081 240 aaKnown RBP eCLIP25.27■■□□□ 1.64
NCKIPSD-209ENST00000470006 MIS18AQ9NYP9 233 aa25.27■■□□□ 1.64
NCKIPSD-209ENST00000470006 SNED1Q8TER0 1413 aa25.27■■□□□ 1.64
NCKIPSD-209ENST00000470006 ADARB2Q9NS39 739 aaKnown RBP25.26■■□□□ 1.63
NCKIPSD-209ENST00000470006 RRP7AQ9Y3A4 280 aaKnown RBP25.26■■□□□ 1.63
NCKIPSD-209ENST00000470006 NUP98P52948 1817 aa25.26■■□□□ 1.63
NCKIPSD-209ENST00000470006 CASP8AP2Q9UKL3 1982 aa25.25■■□□□ 1.63
NCKIPSD-209ENST00000470006 HOXA10P31260 410 aaPredicted RBP25.25■■□□□ 1.63
NCKIPSD-209ENST00000470006 TAF7Q15545 349 aaPredicted RBP25.25■■□□□ 1.63
NCKIPSD-209ENST00000470006 MCOLN1Q9GZU1 580 aa25.25■■□□□ 1.63
NCKIPSD-209ENST00000470006 ZNF408Q9H9D4 720 aa25.25■■□□□ 1.63
NCKIPSD-209ENST00000470006 ERVV-1B6SEH8 477 aa25.24■■□□□ 1.63
NCKIPSD-209ENST00000470006 CA12O43570 354 aa25.24■■□□□ 1.63
NCKIPSD-209ENST00000470006 AOC3Q16853 763 aa25.24■■□□□ 1.63
NCKIPSD-209ENST00000470006 CRAMP1Q96RY5 1269 aa25.24■■□□□ 1.63
NCKIPSD-209ENST00000470006 GPRC5DQ9NZD1 345 aa25.24■■□□□ 1.63
NCKIPSD-209ENST00000470006 MAP3K15Q6ZN16 1313 aa25.23■■□□□ 1.63
NCKIPSD-209ENST00000470006 SAPCD2Q86UD0 394 aa25.23■■□□□ 1.63
NCKIPSD-209ENST00000470006 SLC51AQ86UW1 340 aa25.23■■□□□ 1.63
NCKIPSD-209ENST00000470006 CCER1Q8TC90 406 aaPredicted RBP25.23■■□□□ 1.63
NCKIPSD-209ENST00000470006 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
NCKIPSD-209ENST00000470006 MYL6BP14649 208 aa25.22■■□□□ 1.63
NCKIPSD-209ENST00000470006 TTLL7Q6ZT98 887 aa25.22■■□□□ 1.63
NCKIPSD-209ENST00000470006 GLIS2Q9BZE0 524 aaPredicted RBP25.22■■□□□ 1.63
NCKIPSD-209ENST00000470006 ZBTB3Q9H5J0 574 aa25.22■■□□□ 1.63
NCKIPSD-209ENST00000470006 DGKZQ13574 1117 aa25.21■■□□□ 1.63
NCKIPSD-209ENST00000470006 SUSD4Q5VX71 490 aa25.21■■□□□ 1.63
NCKIPSD-209ENST00000470006 HTATSF1O43719 755 aaKnown RBP25.2■■□□□ 1.62
NCKIPSD-209ENST00000470006 BCL2L13Q9BXK5 485 aa25.2■■□□□ 1.62
NCKIPSD-209ENST00000470006 LAMB4A4D0S4 1761 aa25.2■■□□□ 1.62
NCKIPSD-209ENST00000470006 GMPSP49915 693 aaPredicted RBP25.19■■□□□ 1.62
NCKIPSD-209ENST00000470006 BRPF1P55201 1214 aaPredicted RBP25.19■■□□□ 1.62
NCKIPSD-209ENST00000470006 CXCL9Q07325 125 aa25.19■■□□□ 1.62
NCKIPSD-209ENST00000470006 PCDH10Q9P2E7 1040 aa25.19■■□□□ 1.62
NCKIPSD-209ENST00000470006 ZNRF3Q9ULT6 936 aa25.19■■□□□ 1.62
NCKIPSD-209ENST00000470006 UBN2Q6ZU65 1347 aa25.18■■□□□ 1.62
NCKIPSD-209ENST00000470006 CIAPIN1Q6FI81 312 aa25.18■■□□□ 1.62
NCKIPSD-209ENST00000470006 SUPT20HQ8NEM7 779 aa25.18■■□□□ 1.62
NCKIPSD-209ENST00000470006 NLRP3Q96P20 1036 aa25.18■■□□□ 1.62
NCKIPSD-209ENST00000470006 PPP1R42Q7Z4L9 355 aa25.17■■□□□ 1.62
NCKIPSD-209ENST00000470006 VPS33BQ9H267 617 aa25.17■■□□□ 1.62
NCKIPSD-209ENST00000470006 RIC1Q4ADV7 1423 aa25.17■■□□□ 1.62
NCKIPSD-209ENST00000470006 C3orf67Q6ZVT6 689 aa25.16■■□□□ 1.62
NCKIPSD-209ENST00000470006 HHIPL1Q96JK4 782 aa25.16■■□□□ 1.62
NCKIPSD-209ENST00000470006 ATP6V0A2Q9Y487 856 aa25.16■■□□□ 1.62
NCKIPSD-209ENST00000470006 IBTKQ9P2D0 1353 aaPredicted RBP25.16■■□□□ 1.62
NCKIPSD-209ENST00000470006 PNISRQ8TF01 805 aaKnown RBP25.15■■□□□ 1.62
NCKIPSD-209ENST00000470006 RAD17O75943 681 aa25.14■■□□□ 1.62
NCKIPSD-209ENST00000470006 NTSR2O95665 410 aa25.14■■□□□ 1.62
NCKIPSD-209ENST00000470006 NEFMP07197 916 aa25.14■■□□□ 1.62
NCKIPSD-209ENST00000470006 DPP8Q6V1X1 898 aaPredicted RBP25.14■■□□□ 1.62
NCKIPSD-209ENST00000470006 CDC37L1Q7L3B6 337 aa25.14■■□□□ 1.62
NCKIPSD-209ENST00000470006 ZNF34Q8IZ26 560 aa25.14■■□□□ 1.62
NCKIPSD-209ENST00000470006 TNIP1Q15025 636 aa25.13■■□□□ 1.61
NCKIPSD-209ENST00000470006 NOGQ13253 232 aa25.12■■□□□ 1.61
NCKIPSD-209ENST00000470006 MPNDQ8N594 471 aa25.12■■□□□ 1.61
NCKIPSD-209ENST00000470006 ZC3H15Q8WU90 426 aaKnown RBP25.12■■□□□ 1.61
NCKIPSD-209ENST00000470006 HUNKP57058 714 aa25.11■■□□□ 1.61
NCKIPSD-209ENST00000470006 PARP10Q53GL7 1025 aa25.11■■□□□ 1.61
NCKIPSD-209ENST00000470006 GIGYF2Q6Y7W6 1299 aaKnown RBP25.11■■□□□ 1.61
NCKIPSD-209ENST00000470006 PGAP2Q9UHJ9 254 aa25.11■■□□□ 1.61
NCKIPSD-209ENST00000470006 ABCC4O15439 1325 aa25.11■■□□□ 1.61
NCKIPSD-209ENST00000470006 H7C1D1 291 aa25.1■■□□□ 1.61
NCKIPSD-209ENST00000470006 HIRAP54198 1017 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms