RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 SLX4Q8IY92 1834 aa12.52□□□□□ -0.41
SRRT-208ENST00000469602 SBF1O95248 1867 aa12.52□□□□□ -0.41
SRRT-208ENST00000469602 VAMP4O75379 141 aa12.51□□□□□ -0.41
SRRT-208ENST00000469602 ARHGAP27Q6ZUM4 889 aa12.51□□□□□ -0.41
SRRT-208ENST00000469602 RNF123Q5XPI4 1314 aa12.51□□□□□ -0.41
SRRT-208ENST00000469602 LAMB2P55268 1798 aa12.51□□□□□ -0.41
SRRT-208ENST00000469602 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
SRRT-208ENST00000469602 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
SRRT-208ENST00000469602 SLC4A2P04920 1241 aa12.5□□□□□ -0.41
SRRT-208ENST00000469602 NPR1P16066 1061 aa12.5□□□□□ -0.41
SRRT-208ENST00000469602 CRY2Q49AN0 593 aa12.5□□□□□ -0.41
SRRT-208ENST00000469602 RIC3Q7Z5B4 369 aa12.5□□□□□ -0.41
SRRT-208ENST00000469602 CNKSR1Q969H4 720 aa12.5□□□□□ -0.41
SRRT-208ENST00000469602 ISCA1Q9BUE6 129 aa12.5□□□□□ -0.41
SRRT-208ENST00000469602 FER1L6Q2WGJ9 1857 aa12.49□□□□□ -0.41
SRRT-208ENST00000469602 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
SRRT-208ENST00000469602 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
SRRT-208ENST00000469602 E9PSI1 815 aa12.49□□□□□ -0.41
SRRT-208ENST00000469602 TRIM28Q13263 835 aaKnown RBP12.49□□□□□ -0.41
SRRT-208ENST00000469602 PRPF40BQ6NWY9 871 aaKnown RBP12.49□□□□□ -0.41
SRRT-208ENST00000469602 ADCY9O60503 1353 aa12.48□□□□□ -0.41
SRRT-208ENST00000469602 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
SRRT-208ENST00000469602 ATP5J2-PTCD1G3V325 749 aa12.48□□□□□ -0.41
SRRT-208ENST00000469602 SLC10A5Q5PT55 438 aa12.48□□□□□ -0.41
SRRT-208ENST00000469602 G2E3Q7L622 706 aa12.48□□□□□ -0.41
SRRT-208ENST00000469602 TRMT112Q9UI30 125 aaKnown RBP12.48□□□□□ -0.41
SRRT-208ENST00000469602 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
SRRT-208ENST00000469602 C21orf2O43822 256 aa12.47□□□□□ -0.41
SRRT-208ENST00000469602 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
SRRT-208ENST00000469602 KSR2Q6VAB6 950 aa12.47□□□□□ -0.41
SRRT-208ENST00000469602 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
SRRT-208ENST00000469602 ZNF784Q8NCA9 323 aaPredicted RBP12.47□□□□□ -0.41
SRRT-208ENST00000469602 RPGRQ92834 1020 aaKnown RBP12.47□□□□□ -0.41
SRRT-208ENST00000469602 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
SRRT-208ENST00000469602 METTL22Q9BUU2 404 aaPredicted RBP12.47□□□□□ -0.41
SRRT-208ENST00000469602 MAP3K2Q9Y2U5 619 aa12.47□□□□□ -0.41
SRRT-208ENST00000469602 ALDH1B1P30837 517 aa12.46□□□□□ -0.41
SRRT-208ENST00000469602 HOXA10P31260 410 aaPredicted RBP12.46□□□□□ -0.41
SRRT-208ENST00000469602 FLIIQ13045 1269 aa12.46□□□□□ -0.41
SRRT-208ENST00000469602 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
SRRT-208ENST00000469602 SYNE4Q8N205 404 aa12.46□□□□□ -0.41
SRRT-208ENST00000469602 C7orf43Q8WVR3 580 aa12.46□□□□□ -0.41
SRRT-208ENST00000469602 ZNF428Q96B54 188 aa12.46□□□□□ -0.41
SRRT-208ENST00000469602 MYD88Q99836 296 aa12.46□□□□□ -0.41
SRRT-208ENST00000469602 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
SRRT-208ENST00000469602 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
SRRT-208ENST00000469602 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
SRRT-208ENST00000469602 SOGA3Q5TF21 947 aa12.45□□□□□ -0.42
SRRT-208ENST00000469602 CCDC191Q8NCU4 936 aa12.45□□□□□ -0.42
SRRT-208ENST00000469602 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
SRRT-208ENST00000469602 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
SRRT-208ENST00000469602 RBM17Q96I25 401 aaKnown RBP12.45□□□□□ -0.42
SRRT-208ENST00000469602 TAF1P21675 1872 aa12.44□□□□□ -0.42
SRRT-208ENST00000469602 NFKBIEO00221 500 aa12.44□□□□□ -0.42
SRRT-208ENST00000469602 RASSF7Q02833 373 aa12.44□□□□□ -0.42
SRRT-208ENST00000469602 NEXNQ0ZGT2 675 aa12.44□□□□□ -0.42
SRRT-208ENST00000469602 FKBP5Q13451 457 aaPredicted RBP12.44□□□□□ -0.42
SRRT-208ENST00000469602 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
SRRT-208ENST00000469602 TRMT2AQ8IZ69 625 aaKnown RBP12.44□□□□□ -0.42
SRRT-208ENST00000469602 ZBTB38Q8NAP3 1195 aaPredicted RBP12.44□□□□□ -0.42
SRRT-208ENST00000469602 CRAMP1Q96RY5 1269 aa12.44□□□□□ -0.42
SRRT-208ENST00000469602 CWC25Q9NXE8 425 aaPredicted RBP12.44□□□□□ -0.42
SRRT-208ENST00000469602 TIAM2Q8IVF5 1701 aa12.43□□□□□ -0.42
SRRT-208ENST00000469602 IGKV5-2P06315 115 aa12.43□□□□□ -0.42
SRRT-208ENST00000469602 LMNB1P20700 586 aa12.43□□□□□ -0.42
SRRT-208ENST00000469602 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
SRRT-208ENST00000469602 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
SRRT-208ENST00000469602 MYH3P11055 1940 aa12.43□□□□□ -0.42
SRRT-208ENST00000469602 LTBP3Q9NS15 1303 aa12.42□□□□□ -0.42
SRRT-208ENST00000469602 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
SRRT-208ENST00000469602 PCCAP05165 728 aaPredicted RBP12.42□□□□□ -0.42
SRRT-208ENST00000469602 PRELPP51888 382 aa12.42□□□□□ -0.42
SRRT-208ENST00000469602 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
SRRT-208ENST00000469602 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
SRRT-208ENST00000469602 TAOK3Q9H2K8 898 aa12.42□□□□□ -0.42
SRRT-208ENST00000469602 ABCC4O15439 1325 aa12.41□□□□□ -0.42
SRRT-208ENST00000469602 NEURL1BA8MQ27 555 aa12.41□□□□□ -0.42
SRRT-208ENST00000469602 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
SRRT-208ENST00000469602 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
SRRT-208ENST00000469602 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
SRRT-208ENST00000469602 OLFM4Q6UX06 510 aa12.41□□□□□ -0.42
SRRT-208ENST00000469602 DDX46Q7L014 1031 aaKnown RBP12.41□□□□□ -0.42
SRRT-208ENST00000469602 RTKN2Q8IZC4 609 aa12.41□□□□□ -0.42
SRRT-208ENST00000469602 ZC3H4Q9UPT8 1303 aaKnown RBP12.4□□□□□ -0.42
SRRT-208ENST00000469602 SNED1Q8TER0 1413 aa12.4□□□□□ -0.42
SRRT-208ENST00000469602 PPEF1O14829 653 aaPredicted RBP12.4□□□□□ -0.42
SRRT-208ENST00000469602 SF3B3Q15393 1217 aaKnown RBP12.4□□□□□ -0.42
SRRT-208ENST00000469602 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
SRRT-208ENST00000469602 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
SRRT-208ENST00000469602 CDHR2Q9BYE9 1310 aa12.39□□□□□ -0.43
SRRT-208ENST00000469602 F6X3S4 739 aa12.39□□□□□ -0.43
SRRT-208ENST00000469602 BBOX1O75936 387 aa12.39□□□□□ -0.43
SRRT-208ENST00000469602 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
SRRT-208ENST00000469602 FKBP4Q02790 459 aaKnown RBP eCLIP12.39□□□□□ -0.43
SRRT-208ENST00000469602 GRAPQ13588 217 aa12.39□□□□□ -0.43
SRRT-208ENST00000469602 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
SRRT-208ENST00000469602 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
SRRT-208ENST00000469602 GRAPLQ8TC17 118 aaPredicted RBP12.39□□□□□ -0.43
SRRT-208ENST00000469602 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
SRRT-208ENST00000469602 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms