RNA–Protein interactions for RNA: ENST00000469108.1

CDK5-202, Transcript of cyclin dependent kinase 5, humanhuman

TSL 3

Gene CDK5, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-202ENST00000469108 C21orf2O43822 256 aa28.84■■■□□ 2.21
CDK5-202ENST00000469108 RASSF7Q02833 373 aa28.84■■■□□ 2.21
CDK5-202ENST00000469108 CRY2Q49AN0 593 aa28.84■■■□□ 2.21
CDK5-202ENST00000469108 C9orf131Q5VYM1 1079 aa28.84■■■□□ 2.21
CDK5-202ENST00000469108 NLRP10Q86W26 655 aa28.84■■■□□ 2.21
CDK5-202ENST00000469108 UTP14AQ9BVJ6 771 aaKnown RBP28.84■■■□□ 2.21
CDK5-202ENST00000469108 RNF123Q5XPI4 1314 aa28.84■■■□□ 2.21
CDK5-202ENST00000469108 PHAXQ9H814 394 aaKnown RBP28.83■■■□□ 2.21
CDK5-202ENST00000469108 DDX60Q8IY21 1712 aaKnown RBP28.83■■■□□ 2.21
CDK5-202ENST00000469108 TWISTNBQ3B726 338 aaPredicted RBP28.82■■■□□ 2.2
CDK5-202ENST00000469108 ZNF219Q9P2Y4 722 aaPredicted RBP28.82■■■□□ 2.2
CDK5-202ENST00000469108 NFKBIEO00221 500 aa28.81■■■□□ 2.2
CDK5-202ENST00000469108 RNF181Q9P0P0 153 aa28.81■■■□□ 2.2
CDK5-202ENST00000469108 CCER2I3L3R5 266 aa28.79■■■□□ 2.2
CDK5-202ENST00000469108 PRELPP51888 382 aa28.79■■■□□ 2.2
CDK5-202ENST00000469108 GOLGA2Q08379 1002 aa28.79■■■□□ 2.2
CDK5-202ENST00000469108 SLC10A5Q5PT55 438 aa28.79■■■□□ 2.2
CDK5-202ENST00000469108 ZNF526Q8TF50 670 aaPredicted RBP28.79■■■□□ 2.2
CDK5-202ENST00000469108 ISCA1Q9BUE6 129 aa28.79■■■□□ 2.2
CDK5-202ENST00000469108 GPBP1L1Q9HC44 474 aaPredicted RBP28.79■■■□□ 2.2
CDK5-202ENST00000469108 LMNB1P20700 586 aa28.78■■■□□ 2.2
CDK5-202ENST00000469108 ALDH1B1P30837 517 aa28.78■■■□□ 2.2
CDK5-202ENST00000469108 SOGA3Q5TF21 947 aa28.78■■■□□ 2.2
CDK5-202ENST00000469108 C7orf43Q8WVR3 580 aa28.78■■■□□ 2.2
CDK5-202ENST00000469108 SPINK5Q9NQ38 1064 aaPredicted RBP28.78■■■□□ 2.2
CDK5-202ENST00000469108 ZNF521Q96K83 1311 aa28.77■■■□□ 2.2
CDK5-202ENST00000469108 C3orf67Q6ZVT6 689 aa28.77■■■□□ 2.2
CDK5-202ENST00000469108 RIC3Q7Z5B4 369 aa28.77■■■□□ 2.2
CDK5-202ENST00000469108 RPGRQ92834 1020 aaKnown RBP28.77■■■□□ 2.2
CDK5-202ENST00000469108 TRMT112Q9UI30 125 aaKnown RBP28.77■■■□□ 2.2
CDK5-202ENST00000469108 HOXA10P31260 410 aaPredicted RBP28.76■■■□□ 2.19
CDK5-202ENST00000469108 STK31Q9BXU1 1019 aa28.76■■■□□ 2.19
CDK5-202ENST00000469108 SH3TC1Q8TE82 1336 aa28.75■■■□□ 2.19
CDK5-202ENST00000469108 LTBP3Q9NS15 1303 aa28.75■■■□□ 2.19
CDK5-202ENST00000469108 ATP5J2-PTCD1G3V325 749 aa28.75■■■□□ 2.19
CDK5-202ENST00000469108 NLRP3Q96P20 1036 aa28.75■■■□□ 2.19
CDK5-202ENST00000469108 TAOK3Q9H2K8 898 aa28.74■■■□□ 2.19
CDK5-202ENST00000469108 MYH16Q9H6N6 1097 aa28.74■■■□□ 2.19
CDK5-202ENST00000469108 ZC3H4Q9UPT8 1303 aaKnown RBP28.73■■■□□ 2.19
CDK5-202ENST00000469108 TCERG1O14776 1098 aaKnown RBP28.73■■■□□ 2.19
CDK5-202ENST00000469108 DDX58O95786 925 aaKnown RBP28.73■■■□□ 2.19
CDK5-202ENST00000469108 EXOSC9Q06265 439 aaKnown RBP28.73■■■□□ 2.19
CDK5-202ENST00000469108 TRIM28Q13263 835 aaKnown RBP28.73■■■□□ 2.19
CDK5-202ENST00000469108 CCDC93Q567U6 631 aa28.73■■■□□ 2.19
CDK5-202ENST00000469108 SYNE4Q8N205 404 aa28.73■■■□□ 2.19
CDK5-202ENST00000469108 ZNF428Q96B54 188 aa28.72■■■□□ 2.19
CDK5-202ENST00000469108 RBM17Q96I25 401 aaKnown RBP28.72■■■□□ 2.19
CDK5-202ENST00000469108 CRAMP1Q96RY5 1269 aa28.72■■■□□ 2.19
CDK5-202ENST00000469108 HCLS1P14317 486 aaPredicted RBP28.71■■■□□ 2.19
CDK5-202ENST00000469108 TAF1P21675 1872 aa28.71■■■□□ 2.19
CDK5-202ENST00000469108 VAMP4O75379 141 aa28.7■■■□□ 2.18
CDK5-202ENST00000469108 OLFM4Q6UX06 510 aa28.7■■■□□ 2.18
CDK5-202ENST00000469108 SNED1Q8TER0 1413 aa28.69■■■□□ 2.18
CDK5-202ENST00000469108 SLC4A2P04920 1241 aa28.69■■■□□ 2.18
CDK5-202ENST00000469108 MYD88Q99836 296 aa28.69■■■□□ 2.18
CDK5-202ENST00000469108 KSR2Q6VAB6 950 aa28.68■■■□□ 2.18
CDK5-202ENST00000469108 G2E3Q7L622 706 aa28.68■■■□□ 2.18
CDK5-202ENST00000469108 FAM89AQ96GI7 184 aa28.68■■■□□ 2.18
CDK5-202ENST00000469108 METTL22Q9BUU2 404 aaPredicted RBP28.68■■■□□ 2.18
CDK5-202ENST00000469108 MAP3K2Q9Y2U5 619 aa28.68■■■□□ 2.18
CDK5-202ENST00000469108 RTKN2Q8IZC4 609 aa28.67■■■□□ 2.18
CDK5-202ENST00000469108 PI4KAP2A4QPH2 592 aa28.66■■■□□ 2.18
CDK5-202ENST00000469108 C1QTNF8P60827 252 aa28.66■■■□□ 2.18
CDK5-202ENST00000469108 PI4KAP1Q8N8J0 262 aa28.66■■■□□ 2.18
CDK5-202ENST00000469108 ABCC4O15439 1325 aa28.66■■■□□ 2.18
CDK5-202ENST00000469108 PPEF1O14829 653 aaPredicted RBP28.65■■■□□ 2.18
CDK5-202ENST00000469108 FKBP4Q02790 459 aaKnown RBP eCLIP28.65■■■□□ 2.18
CDK5-202ENST00000469108 CCDC191Q8NCU4 936 aa28.65■■■□□ 2.18
CDK5-202ENST00000469108 KDM2BQ8NHM5 1336 aa28.65■■■□□ 2.18
CDK5-202ENST00000469108 KIF3CO14782 793 aa28.64■■■□□ 2.18
CDK5-202ENST00000469108 DIEXFQ68CQ4 756 aaKnown RBP28.64■■■□□ 2.18
CDK5-202ENST00000469108 CC2D2BQ6DHV5 1058 aa28.64■■■□□ 2.18
CDK5-202ENST00000469108 MYH3P11055 1940 aa28.63■■■□□ 2.17
CDK5-202ENST00000469108 FLIIQ13045 1269 aa28.63■■■□□ 2.17
CDK5-202ENST00000469108 ZBTB38Q8NAP3 1195 aaPredicted RBP28.63■■■□□ 2.17
CDK5-202ENST00000469108 NMRK2Q9NPI5 230 aa28.63■■■□□ 2.17
CDK5-202ENST00000469108 CWC25Q9NXE8 425 aaPredicted RBP28.63■■■□□ 2.17
CDK5-202ENST00000469108 LRRC37AA6NMS7 1700 aa28.63■■■□□ 2.17
CDK5-202ENST00000469108 RTL5Q5HYW3 569 aaPredicted RBP28.62■■■□□ 2.17
CDK5-202ENST00000469108 IRS4O14654 1257 aaPredicted RBP28.61■■■□□ 2.17
CDK5-202ENST00000469108 PCCAP05165 728 aaPredicted RBP28.6■■■□□ 2.17
CDK5-202ENST00000469108 GRIPAP1Q4V328 841 aa28.6■■■□□ 2.17
CDK5-202ENST00000469108 DDX46Q7L014 1031 aaKnown RBP28.6■■■□□ 2.17
CDK5-202ENST00000469108 SLC51AQ86UW1 340 aa28.6■■■□□ 2.17
CDK5-202ENST00000469108 PSMD1Q99460 953 aa28.6■■■□□ 2.17
CDK5-202ENST00000469108 ZNF277Q9NRM2 450 aaPredicted RBP28.6■■■□□ 2.17
CDK5-202ENST00000469108 WDR90Q96KV7 1748 aa28.6■■■□□ 2.17
CDK5-202ENST00000469108 GLTPD2A6NH11 291 aa28.59■■■□□ 2.17
CDK5-202ENST00000469108 E9PSI1 815 aa28.59■■■□□ 2.17
CDK5-202ENST00000469108 IGKV5-2P06315 115 aa28.59■■■□□ 2.17
CDK5-202ENST00000469108 NEXNQ0ZGT2 675 aa28.59■■■□□ 2.17
CDK5-202ENST00000469108 SF3B3Q15393 1217 aaKnown RBP28.59■■■□□ 2.17
CDK5-202ENST00000469108 ATP6V0A2Q9Y487 856 aa28.59■■■□□ 2.17
CDK5-202ENST00000469108 COL4A1P02462 1669 aa28.58■■■□□ 2.17
CDK5-202ENST00000469108 BBOX1O75936 387 aa28.58■■■□□ 2.17
CDK5-202ENST00000469108 FKBP5Q13451 457 aaPredicted RBP28.58■■■□□ 2.17
CDK5-202ENST00000469108 GRAPQ13588 217 aa28.57■■■□□ 2.16
CDK5-202ENST00000469108 GRAPLQ8TC17 118 aaPredicted RBP28.57■■■□□ 2.16
CDK5-202ENST00000469108 HSP90B1P14625 803 aaKnown RBP28.56■■■□□ 2.16
CDK5-202ENST00000469108 SLFN5Q08AF3 891 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms