RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 TOMM70O94826 608 aa13.51□□□□□ -0.25
SSR3-205ENST00000467789 ALDH1B1P30837 517 aa13.51□□□□□ -0.25
SSR3-205ENST00000467789 PRPF40BQ6NWY9 871 aaKnown RBP13.51□□□□□ -0.25
SSR3-205ENST00000467789 CFAP44Q96MT7 982 aa13.51□□□□□ -0.25
SSR3-205ENST00000467789 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 SLX4Q8IY92 1834 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 C21orf2O43822 256 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
SSR3-205ENST00000467789 RASSF7Q02833 373 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 PDIA6Q15084 440 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 PARP10Q53GL7 1025 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 TTLL7Q6ZT98 887 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 LRP10Q7Z4F1 713 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 ZNF34Q8IZ26 560 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 TIAM2Q8IVF5 1701 aa13.5□□□□□ -0.25
SSR3-205ENST00000467789 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
SSR3-205ENST00000467789 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
SSR3-205ENST00000467789 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
SSR3-205ENST00000467789 TAOK3Q9H2K8 898 aa13.49□□□□□ -0.25
SSR3-205ENST00000467789 ZBTB3Q9H5J0 574 aa13.49□□□□□ -0.25
SSR3-205ENST00000467789 DDX21Q9NR30 783 aaKnown RBP eCLIP13.49□□□□□ -0.25
SSR3-205ENST00000467789 GLTPD2A6NH11 291 aa13.48□□□□□ -0.25
SSR3-205ENST00000467789 HSPA6P17066 643 aa13.48□□□□□ -0.25
SSR3-205ENST00000467789 CRY2Q49AN0 593 aa13.48□□□□□ -0.25
SSR3-205ENST00000467789 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
SSR3-205ENST00000467789 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
SSR3-205ENST00000467789 C7orf43Q8WVR3 580 aa13.48□□□□□ -0.25
SSR3-205ENST00000467789 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
SSR3-205ENST00000467789 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
SSR3-205ENST00000467789 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
SSR3-205ENST00000467789 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
SSR3-205ENST00000467789 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
SSR3-205ENST00000467789 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
SSR3-205ENST00000467789 FAM177BA6PVY3 158 aa13.47□□□□□ -0.25
SSR3-205ENST00000467789 APAF1O14727 1248 aa13.47□□□□□ -0.25
SSR3-205ENST00000467789 GNAI1P63096 354 aa13.47□□□□□ -0.25
SSR3-205ENST00000467789 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
SSR3-205ENST00000467789 POTEHQ6S545 545 aa13.47□□□□□ -0.25
SSR3-205ENST00000467789 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
SSR3-205ENST00000467789 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
SSR3-205ENST00000467789 DBF4Q9UBU7 674 aaPredicted RBP13.47□□□□□ -0.25
SSR3-205ENST00000467789 CEP350Q5VT06 3117 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 ZNF853P0CG23 659 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 GPTP24298 496 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 HOXA10P31260 410 aaPredicted RBP13.46□□□□□ -0.25
SSR3-205ENST00000467789 PRELPP51888 382 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 GRIPAP1Q4V328 841 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 HDGFL1Q5TGJ6 251 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 CC2D2BQ6DHV5 1058 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.25
SSR3-205ENST00000467789 NTSR2O95665 410 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 VEGFAP15692 232 aaPredicted RBP13.45□□□□□ -0.26
SSR3-205ENST00000467789 FSTL1Q12841 308 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 PROSER3Q2NL68 480 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 SUSD4Q5VX71 490 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
SSR3-205ENST00000467789 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 ABCC12Q96J65 1359 aa13.45□□□□□ -0.26
SSR3-205ENST00000467789 ANP32CO43423 234 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 NUBP1P53384 320 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
SSR3-205ENST00000467789 SLC10A5Q5PT55 438 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 XAGE3Q8WTP9 111 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 NLRP3Q96P20 1036 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 UTP14AQ9BVJ6 771 aaKnown RBP13.44□□□□□ -0.26
SSR3-205ENST00000467789 RRAGCQ9HB90 399 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 CHPF2Q9P2E5 772 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 WDR90Q96KV7 1748 aa13.44□□□□□ -0.26
SSR3-205ENST00000467789 ANXA1P04083 346 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 APLP1P51693 650 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
SSR3-205ENST00000467789 TCIRG1Q13488 830 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 GSE1Q14687 1217 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 DUSP27Q5VZP5 1158 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 PLBD2Q8NHP8 589 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 RBM17Q96I25 401 aaKnown RBP13.43□□□□□ -0.26
SSR3-205ENST00000467789 CRAMP1Q96RY5 1269 aa13.43□□□□□ -0.26
SSR3-205ENST00000467789 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
SSR3-205ENST00000467789 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
SSR3-205ENST00000467789 PSMD1Q99460 953 aa13.42□□□□□ -0.26
SSR3-205ENST00000467789 SMC1BQ8NDV3 1235 aa13.41□□□□□ -0.26
SSR3-205ENST00000467789 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
SSR3-205ENST00000467789 TMX4Q9H1E5 349 aaPredicted RBP13.4□□□□□ -0.26
SSR3-205ENST00000467789 MRS2Q9HD23 443 aa13.4□□□□□ -0.26
SSR3-205ENST00000467789 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
SSR3-205ENST00000467789 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
SSR3-205ENST00000467789 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
SSR3-205ENST00000467789 SCN4AP35499 1836 aa13.39□□□□□ -0.27
SSR3-205ENST00000467789 IL16Q14005 1332 aa13.39□□□□□ -0.27
SSR3-205ENST00000467789 LAMB2P55268 1798 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 IQCA1LA6NCM1 817 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 PPEF1O14829 653 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms