RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 OSBPL3Q9H4L5 887 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 PGPEP1Q9NXJ5 209 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 MAFBQ9Y5Q3 323 aaPredicted RBP8.66□□□□□ -1.02
PSME4-204ENST00000466539 ADGRB2O60241 1585 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 NWD1Q149M9 1564 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 YTHDC2Q9H6S0 1430 aaKnown RBP8.65□□□□□ -1.02
PSME4-204ENST00000466539 LRPPRCP42704 1394 aaKnown RBP8.65□□□□□ -1.02
PSME4-204ENST00000466539 PIK3R4Q99570 1358 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 AXIN1O15169 862 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 BMP1P13497 986 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 MAP7D1Q3KQU3 841 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 CC2D2BQ6DHV5 1058 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 THEMISQ8N1K5 641 aaPredicted RBP8.65□□□□□ -1.02
PSME4-204ENST00000466539 AGBL1Q96MI9 1066 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 CARD11Q9BXL7 1154 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 STRCQ7RTU9 1775 aa8.65□□□□□ -1.02
PSME4-204ENST00000466539 FAM135BQ49AJ0 1406 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 CCDC7Q96M83 1385 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 USP17L3A6NCW0 530 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 USP17L4A6NCW7 530 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 STAU1O95793 577 aaKnown RBP8.64□□□□□ -1.03
PSME4-204ENST00000466539 RFX1P22670 979 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 LMOD1P29536 600 aaPredicted RBP8.64□□□□□ -1.03
PSME4-204ENST00000466539 CTC1Q2NKJ3 1217 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 ZNF326Q5BKZ1 582 aaKnown RBP8.64□□□□□ -1.03
PSME4-204ENST00000466539 USP17L2Q6R6M4 530 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 USP17L1Q7RTZ2 530 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 TRIM46Q7Z4K8 759 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
PSME4-204ENST00000466539 PTCH1Q13635 1447 aa8.63□□□□□ -1.03
PSME4-204ENST00000466539 PTPRUQ92729 1446 aa8.63□□□□□ -1.03
PSME4-204ENST00000466539 METP08581 1390 aa8.63□□□□□ -1.03
PSME4-204ENST00000466539 ST20-MTHFSA0A0A6YYL1 179 aa8.63□□□□□ -1.03
PSME4-204ENST00000466539 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
PSME4-204ENST00000466539 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
PSME4-204ENST00000466539 PUS7Q96PZ0 661 aaKnown RBP8.63□□□□□ -1.03
PSME4-204ENST00000466539 TBX22Q9Y458 520 aa8.63□□□□□ -1.03
PSME4-204ENST00000466539 TULP4Q9NRJ4 1543 aa8.63□□□□□ -1.03
PSME4-204ENST00000466539 EIF3AQ14152 1382 aaKnown RBP8.62□□□□□ -1.03
PSME4-204ENST00000466539 KIF7Q2M1P5 1343 aa8.62□□□□□ -1.03
PSME4-204ENST00000466539 SRPK2P78362 688 aaKnown RBP8.62□□□□□ -1.03
PSME4-204ENST00000466539 USP4Q13107 963 aa8.62□□□□□ -1.03
PSME4-204ENST00000466539 DISP3Q9P2K9 1392 aa8.61□□□□□ -1.03
PSME4-204ENST00000466539 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.61□□□□□ -1.03
PSME4-204ENST00000466539 SERPINA10Q9UK55 444 aa8.61□□□□□ -1.03
PSME4-204ENST00000466539 PCDHGA11Q9Y5H2 935 aa8.61□□□□□ -1.03
PSME4-204ENST00000466539 ADH1AP07327 375 aa8.6□□□□□ -1.03
PSME4-204ENST00000466539 RELBQ01201 579 aa8.6□□□□□ -1.03
PSME4-204ENST00000466539 EML3Q32P44 896 aa8.6□□□□□ -1.03
PSME4-204ENST00000466539 CDCA8Q53HL2 280 aa8.6□□□□□ -1.03
PSME4-204ENST00000466539 CCDC97Q96F63 343 aaPredicted RBP8.6□□□□□ -1.03
PSME4-204ENST00000466539 ARID3AQ99856 593 aa8.6□□□□□ -1.03
PSME4-204ENST00000466539 ZNF395Q9H8N7 513 aaPredicted RBP8.6□□□□□ -1.03
PSME4-204ENST00000466539 ATP13A2Q9NQ11 1180 aa8.6□□□□□ -1.03
PSME4-204ENST00000466539 MKRN1Q9UHC7 482 aaKnown RBP8.6□□□□□ -1.03
PSME4-204ENST00000466539 ZBTB7BO15156 539 aaPredicted RBP8.59□□□□□ -1.03
PSME4-204ENST00000466539 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
PSME4-204ENST00000466539 CLDN10P78369 228 aa8.59□□□□□ -1.03
PSME4-204ENST00000466539 MRPL14Q6P1L8 145 aaKnown RBP8.59□□□□□ -1.03
PSME4-204ENST00000466539 TXNDC2Q86VQ3 553 aa8.59□□□□□ -1.03
PSME4-204ENST00000466539 KIAA1024Q9UPX6 916 aa8.59□□□□□ -1.03
PSME4-204ENST00000466539 TOPAZ1Q8N9V7 1692 aa8.59□□□□□ -1.03
PSME4-204ENST00000466539 STRCP1A6NGW2 1772 aa8.58□□□□□ -1.04
PSME4-204ENST00000466539 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
PSME4-204ENST00000466539 CENPJQ9HC77 1338 aaPredicted RBP8.58□□□□□ -1.04
PSME4-204ENST00000466539 NPHP4O75161 1426 aaPredicted RBP8.58□□□□□ -1.04
PSME4-204ENST00000466539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.58□□□□□ -1.04
PSME4-204ENST00000466539 POTECB2RU33 542 aa8.58□□□□□ -1.04
PSME4-204ENST00000466539 MYCP01106 439 aaPredicted RBP8.58□□□□□ -1.04
PSME4-204ENST00000466539 PTGIRP43119 386 aa8.58□□□□□ -1.04
PSME4-204ENST00000466539 TMEM132EQ6IEE7 984 aa8.58□□□□□ -1.04
PSME4-204ENST00000466539 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
PSME4-204ENST00000466539 PURBQ96QR8 312 aaKnown RBP8.58□□□□□ -1.04
PSME4-204ENST00000466539 NOD1Q9Y239 953 aa8.58□□□□□ -1.04
PSME4-204ENST00000466539 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
PSME4-204ENST00000466539 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
PSME4-204ENST00000466539 ZFP42Q96MM3 310 aa8.57□□□□□ -1.04
PSME4-204ENST00000466539 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
PSME4-204ENST00000466539 RAB6BQ9NRW1 208 aa8.57□□□□□ -1.04
PSME4-204ENST00000466539 EID1Q9Y6B2 187 aa8.57□□□□□ -1.04
PSME4-204ENST00000466539 ROBO2Q9HCK4 1378 aa8.57□□□□□ -1.04
PSME4-204ENST00000466539 A0A1W2PRU2 124 aa8.56□□□□□ -1.04
PSME4-204ENST00000466539 DKK1O94907 266 aa8.56□□□□□ -1.04
PSME4-204ENST00000466539 GTF2IP78347 998 aa8.56□□□□□ -1.04
PSME4-204ENST00000466539 CRTC2Q53ET0 693 aaPredicted RBP8.56□□□□□ -1.04
PSME4-204ENST00000466539 ANKLE2Q86XL3 938 aa8.56□□□□□ -1.04
PSME4-204ENST00000466539 TSEN34Q9BSV6 310 aaKnown RBP8.56□□□□□ -1.04
PSME4-204ENST00000466539 ARHGEF10LQ9HCE6 1279 aa8.56□□□□□ -1.04
PSME4-204ENST00000466539 NALCNQ8IZF0 1738 aa8.56□□□□□ -1.04
PSME4-204ENST00000466539 NKTRP30414 1462 aaKnown RBP8.56□□□□□ -1.04
PSME4-204ENST00000466539 XIRP1Q702N8 1843 aaKnown RBP8.55□□□□□ -1.04
PSME4-204ENST00000466539 IL2RAP01589 272 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 SCNN1DP51172 638 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 OGFOD1Q8N543 542 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
PSME4-204ENST00000466539 VRTNQ9H8Y1 702 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 ETNK1Q9HBU6 452 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 GMPR2Q9P2T1 348 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms