RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-205ENST00000465950 ZBED4O75132 1171 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 ALDH1L2Q3SY69 923 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 IRS4O14654 1257 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-205ENST00000465950 BBOX1O75936 387 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 PCMTD1Q96MG8 357 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-205ENST00000465950 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 IL15P40933 162 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-205ENST00000465950 CENPQQ7L2Z9 268 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-205ENST00000465950 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 KIF24Q5T7B8 1368 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 LTKP29376 864 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 PNMA8AQ86V59 439 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-205ENST00000465950 TXLNBQ8N3L3 684 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 EMILIN1Q9Y6C2 1016 aa11.12□□□□□ -0.63
SCAF11-205ENST00000465950 COL17A1Q9UMD9 1497 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-205ENST00000465950 NPR1P16066 1061 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 CREBRFQ8IUR6 639 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 OFD1O75665 1012 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 MCM2P49736 904 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 PPM1FP49593 454 aaPredicted RBP11.11□□□□□ -0.63
SCAF11-205ENST00000465950 TAF12Q16514 161 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 USP37Q86T82 979 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 PPP2R3CQ969Q6 453 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 SIL1Q9H173 461 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 CEP131Q9UPN4 1083 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 ERVK-7P63135 1459 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
SCAF11-205ENST00000465950 ODR4Q5SWX8 454 aa11.11□□□□□ -0.63
SCAF11-205ENST00000465950 RNMTO43148 476 aaKnown RBP11.1□□□□□ -0.63
SCAF11-205ENST00000465950 UBXN2AP68543 259 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 NAA16Q6N069 864 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-205ENST00000465950 ZCCHC11Q5TAX3 1644 aaKnown RBP11.1□□□□□ -0.63
SCAF11-205ENST00000465950 PDE8AO60658 829 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 ZNF526Q8TF50 670 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-205ENST00000465950 SPATA31A3Q5VYP0 1347 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 NR1I2O75469 434 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 LRRC27Q9C0I9 530 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-205ENST00000465950 IL16Q14005 1332 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 HMGB1P09429 215 aaKnown RBP11.1□□□□□ -0.63
SCAF11-205ENST00000465950 EXOSC9Q06265 439 aaKnown RBP11.1□□□□□ -0.63
SCAF11-205ENST00000465950 PLS1Q14651 629 aa11.1□□□□□ -0.63
SCAF11-205ENST00000465950 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 CIAPIN1Q6FI81 312 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 CCDC70Q6NSX1 233 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 ARHGEF5Q12774 1597 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 TMTC2Q8N394 836 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 NUP133Q8WUM0 1156 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 RNF181Q9P0P0 153 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 GLI2P10070 1586 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 ZNF396Q96N95 335 aaPredicted RBP11.09□□□□□ -0.63
SCAF11-205ENST00000465950 SMC2O95347 1197 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 YY1P25490 414 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 MMP14P50281 582 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 ATP2B3Q16720 1220 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 ERMNQ8TAM6 284 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
SCAF11-205ENST00000465950 KCNG1Q9UIX4 513 aa11.09□□□□□ -0.63
SCAF11-205ENST00000465950 DDX11Q96FC9 970 aa11.08□□□□□ -0.63
SCAF11-205ENST00000465950 MASTLQ96GX5 879 aa11.08□□□□□ -0.63
SCAF11-205ENST00000465950 ARHGAP31Q2M1Z3 1444 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 FAM135BQ49AJ0 1406 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 LOC102724428A0A0B4J2F2 783 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 SIK1P57059 783 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 SLC4A8Q2Y0W8 1093 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 CCDC191Q8NCU4 936 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 SLC10A4Q96EP9 437 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 AGLP35573 1532 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 NBPF11Q86T75 865 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 LUC7LQ9NQ29 371 aaKnown RBP11.08□□□□□ -0.64
SCAF11-205ENST00000465950 MBIPQ9NS73 344 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 KCNH4Q9UQ05 1017 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 HIBADHP31937 336 aaKnown RBP11.08□□□□□ -0.64
SCAF11-205ENST00000465950 KSR2Q6VAB6 950 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 CCDC73Q6ZRK6 1079 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
SCAF11-205ENST00000465950 TCOF1Q13428 1488 aaKnown RBP11.07□□□□□ -0.64
SCAF11-205ENST00000465950 ADGRL3Q9HAR2 1447 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 CDC45O75419 566 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 MSL1Q68DK7 614 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 SREBF2Q12772 1141 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 COPS6Q7L5N1 327 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 RALGAPBQ86X10 1494 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 TSPY2A6NKD2 308 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 USP14P54578 494 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 LRRC45Q96CN5 670 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 GOPCQ9HD26 462 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 MAP3K2Q9Y2U5 619 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 ARHGEF12Q9NZN5 1544 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 IBSPP21815 317 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms