RNA–Protein interactions for RNA: ENST00000465896.5

PHC3-201, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-201ENST00000465896 GPC2Q8N158 579 aa16.25■□□□□ 0.19
PHC3-201ENST00000465896 TAF1P21675 1872 aa16.25■□□□□ 0.19
PHC3-201ENST00000465896 MAP3K15Q6ZN16 1313 aa16.24■□□□□ 0.19
PHC3-201ENST00000465896 ALDH1B1P30837 517 aa16.24■□□□□ 0.19
PHC3-201ENST00000465896 EPS15P42566 896 aa16.24■□□□□ 0.19
PHC3-201ENST00000465896 CTCFP49711 727 aaPredicted RBP16.24■□□□□ 0.19
PHC3-201ENST00000465896 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
PHC3-201ENST00000465896 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
PHC3-201ENST00000465896 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
PHC3-201ENST00000465896 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
PHC3-201ENST00000465896 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
PHC3-201ENST00000465896 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
PHC3-201ENST00000465896 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
PHC3-201ENST00000465896 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
PHC3-201ENST00000465896 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
PHC3-201ENST00000465896 IBTKQ9P2D0 1353 aaPredicted RBP16.23■□□□□ 0.19
PHC3-201ENST00000465896 ANKRD36CQ5JPF3 1778 aa16.23■□□□□ 0.19
PHC3-201ENST00000465896 WDR33Q9C0J8 1336 aaKnown RBP16.22■□□□□ 0.19
PHC3-201ENST00000465896 NTSR2O95665 410 aa16.22■□□□□ 0.19
PHC3-201ENST00000465896 GPTP24298 496 aa16.22■□□□□ 0.19
PHC3-201ENST00000465896 DEFB115Q30KQ5 88 aa16.22■□□□□ 0.19
PHC3-201ENST00000465896 CST9Q5W186 159 aa16.22■□□□□ 0.19
PHC3-201ENST00000465896 PNMA8AQ86V59 439 aaPredicted RBP16.22■□□□□ 0.19
PHC3-201ENST00000465896 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
PHC3-201ENST00000465896 DDX21Q9NR30 783 aaKnown RBP eCLIP16.22■□□□□ 0.19
PHC3-201ENST00000465896 COL4A1P02462 1669 aa16.21■□□□□ 0.19
PHC3-201ENST00000465896 NUDCQ9Y266 331 aa16.21■□□□□ 0.19
PHC3-201ENST00000465896 TRAF5O00463 557 aa16.2■□□□□ 0.18
PHC3-201ENST00000465896 PDIA6Q15084 440 aa16.2■□□□□ 0.18
PHC3-201ENST00000465896 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
PHC3-201ENST00000465896 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
PHC3-201ENST00000465896 GJA3Q9Y6H8 435 aa16.2■□□□□ 0.18
PHC3-201ENST00000465896 DUOX1Q9NRD9 1551 aa16.2■□□□□ 0.18
PHC3-201ENST00000465896 CRAMP1Q96RY5 1269 aa16.19■□□□□ 0.18
PHC3-201ENST00000465896 MYL6BP14649 208 aa16.18■□□□□ 0.18
PHC3-201ENST00000465896 PROSER3Q2NL68 480 aa16.18■□□□□ 0.18
PHC3-201ENST00000465896 ABHD8Q96I13 439 aa16.18■□□□□ 0.18
PHC3-201ENST00000465896 NYXQ9GZU5 481 aa16.18■□□□□ 0.18
PHC3-201ENST00000465896 TNRC18O15417 2968 aaPredicted RBP16.17■□□□□ 0.18
PHC3-201ENST00000465896 LRRC37AA6NMS7 1700 aa16.17■□□□□ 0.18
PHC3-201ENST00000465896 TCERG1O14776 1098 aaKnown RBP16.17■□□□□ 0.18
PHC3-201ENST00000465896 GTF2E1P29083 439 aaPredicted RBP16.17■□□□□ 0.18
PHC3-201ENST00000465896 CC2D2BQ6DHV5 1058 aa16.17■□□□□ 0.18
PHC3-201ENST00000465896 CYP4F22Q6NT55 531 aa16.17■□□□□ 0.18
PHC3-201ENST00000465896 GIGYF2Q6Y7W6 1299 aaKnown RBP16.17■□□□□ 0.18
PHC3-201ENST00000465896 JDP2Q8WYK2 163 aa16.17■□□□□ 0.18
PHC3-201ENST00000465896 AIDAQ96BJ3 306 aa16.17■□□□□ 0.18
PHC3-201ENST00000465896 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
PHC3-201ENST00000465896 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
PHC3-201ENST00000465896 EIF6P56537 245 aaKnown RBP16.16■□□□□ 0.18
PHC3-201ENST00000465896 LARGE2Q8N3Y3 721 aa16.16■□□□□ 0.18
PHC3-201ENST00000465896 CAPNS2Q96L46 248 aa16.16■□□□□ 0.18
PHC3-201ENST00000465896 ABT1Q9ULW3 272 aaKnown RBP16.16■□□□□ 0.18
PHC3-201ENST00000465896 ANXA1P04083 346 aa16.15■□□□□ 0.18
PHC3-201ENST00000465896 CXCL9Q07325 125 aa16.15■□□□□ 0.18
PHC3-201ENST00000465896 NFE2L2Q16236 605 aa16.15■□□□□ 0.18
PHC3-201ENST00000465896 AOC3Q16853 763 aa16.15■□□□□ 0.18
PHC3-201ENST00000465896 RPGRQ92834 1020 aaKnown RBP16.15■□□□□ 0.18
PHC3-201ENST00000465896 TLL2Q9Y6L7 1015 aa16.15■□□□□ 0.18
PHC3-201ENST00000465896 ABCC4O15439 1325 aa16.15■□□□□ 0.18
PHC3-201ENST00000465896 SHTN1A0MZ66 631 aa16.14■□□□□ 0.17
PHC3-201ENST00000465896 AOC2O75106 756 aa16.14■□□□□ 0.17
PHC3-201ENST00000465896 HIRAP54198 1017 aaPredicted RBP16.14■□□□□ 0.17
PHC3-201ENST00000465896 SLC10A5Q5PT55 438 aa16.14■□□□□ 0.17
PHC3-201ENST00000465896 RTFDC1Q9BY42 306 aaPredicted RBP16.14■□□□□ 0.17
PHC3-201ENST00000465896 GPRC5DQ9NZD1 345 aa16.14■□□□□ 0.17
PHC3-201ENST00000465896 TSKSQ9UJT2 592 aa16.14■□□□□ 0.17
PHC3-201ENST00000465896 ATP6V0A2Q9Y487 856 aa16.14■□□□□ 0.17
PHC3-201ENST00000465896 CASP8AP2Q9UKL3 1982 aa16.14■□□□□ 0.17
PHC3-201ENST00000465896 MAP2K1Q02750 393 aaPredicted RBP16.13■□□□□ 0.17
PHC3-201ENST00000465896 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
PHC3-201ENST00000465896 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
PHC3-201ENST00000465896 RBM17Q96I25 401 aaKnown RBP16.13■□□□□ 0.17
PHC3-201ENST00000465896 YDJCA8MPS7 323 aa16.12■□□□□ 0.17
PHC3-201ENST00000465896 PPIP5K2O43314 1243 aa16.12■□□□□ 0.17
PHC3-201ENST00000465896 FAM161AQ3B820 660 aa16.12■□□□□ 0.17
PHC3-201ENST00000465896 DLK2Q6UY11 383 aa16.12■□□□□ 0.17
PHC3-201ENST00000465896 PNISRQ8TF01 805 aaKnown RBP16.12■□□□□ 0.17
PHC3-201ENST00000465896 GPR101Q96P66 508 aaPredicted RBP16.12■□□□□ 0.17
PHC3-201ENST00000465896 PGAP2Q9UHJ9 254 aa16.12■□□□□ 0.17
PHC3-201ENST00000465896 POLR2AP24928 1970 aaKnown RBP16.12■□□□□ 0.17
PHC3-201ENST00000465896 LMOD1P29536 600 aaPredicted RBP16.11■□□□□ 0.17
PHC3-201ENST00000465896 GMPSP49915 693 aaPredicted RBP16.11■□□□□ 0.17
PHC3-201ENST00000465896 SAPCD2Q86UD0 394 aa16.11■□□□□ 0.17
PHC3-201ENST00000465896 NIM1KQ8IY84 436 aa16.11■□□□□ 0.17
PHC3-201ENST00000465896 ZIC5Q96T25 663 aa16.11■□□□□ 0.17
PHC3-201ENST00000465896 GLIS2Q9BZE0 524 aaPredicted RBP16.11■□□□□ 0.17
PHC3-201ENST00000465896 ERBB4Q15303 1308 aa16.11■□□□□ 0.17
PHC3-201ENST00000465896 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
PHC3-201ENST00000465896 TRPM4Q8TD43 1214 aa16.1■□□□□ 0.17
PHC3-201ENST00000465896 ADARB2Q9NS39 739 aaKnown RBP16.1■□□□□ 0.17
PHC3-201ENST00000465896 SLC34A2O95436 690 aa16.09■□□□□ 0.17
PHC3-201ENST00000465896 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
PHC3-201ENST00000465896 GRM1Q13255 1194 aa16.09■□□□□ 0.17
PHC3-201ENST00000465896 ZNRF3Q9ULT6 936 aa16.09■□□□□ 0.17
PHC3-201ENST00000465896 SCN9AQ15858 1988 aa16.09■□□□□ 0.17
PHC3-201ENST00000465896 RGS19P49795 217 aa16.08■□□□□ 0.16
PHC3-201ENST00000465896 KIAA2012Q0VF49 1180 aa16.08■□□□□ 0.16
PHC3-201ENST00000465896 KRT24Q2M2I5 525 aa16.08■□□□□ 0.16
PHC3-201ENST00000465896 PARP10Q53GL7 1025 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms