RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 SERPINB2P05120 415 aa18.6■□□□□ 0.57
HLA-F-223ENST00000465459 NBPF5PQ86XG9 351 aaPredicted RBP18.6■□□□□ 0.57
HLA-F-223ENST00000465459 SGIP1Q9BQI5 828 aa18.6■□□□□ 0.57
HLA-F-223ENST00000465459 UTP14AQ9BVJ6 771 aaKnown RBP18.6■□□□□ 0.57
HLA-F-223ENST00000465459 ATF5Q9Y2D1 282 aaPredicted RBP18.6■□□□□ 0.57
HLA-F-223ENST00000465459 GCKRQ14397 625 aa18.59■□□□□ 0.57
HLA-F-223ENST00000465459 CWF19L2Q2TBE0 894 aaKnown RBP18.59■□□□□ 0.57
HLA-F-223ENST00000465459 SUSD4Q5VX71 490 aa18.59■□□□□ 0.57
HLA-F-223ENST00000465459 CLUAP1Q96AJ1 413 aa18.59■□□□□ 0.57
HLA-F-223ENST00000465459 PLIN1O60240 522 aa18.58■□□□□ 0.56
HLA-F-223ENST00000465459 NTSR2O95665 410 aa18.58■□□□□ 0.56
HLA-F-223ENST00000465459 PCCAP05165 728 aaPredicted RBP18.58■□□□□ 0.56
HLA-F-223ENST00000465459 HSP90B1P14625 803 aaKnown RBP18.58■□□□□ 0.56
HLA-F-223ENST00000465459 PTGER2P43116 358 aa18.58■□□□□ 0.56
HLA-F-223ENST00000465459 ZBTB38Q8NAP3 1195 aaPredicted RBP18.58■□□□□ 0.56
HLA-F-223ENST00000465459 TRMT112Q9UI30 125 aaKnown RBP18.58■□□□□ 0.56
HLA-F-223ENST00000465459 CNBD1Q8NA66 436 aa18.57■□□□□ 0.56
HLA-F-223ENST00000465459 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
HLA-F-223ENST00000465459 N4BP2Q86UW6 1770 aaPredicted RBP18.57■□□□□ 0.56
HLA-F-223ENST00000465459 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
HLA-F-223ENST00000465459 H7C1W4 665 aa18.56■□□□□ 0.56
HLA-F-223ENST00000465459 RLBP1P12271 317 aa18.56■□□□□ 0.56
HLA-F-223ENST00000465459 GTF2E1P29083 439 aaPredicted RBP18.56■□□□□ 0.56
HLA-F-223ENST00000465459 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
HLA-F-223ENST00000465459 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
HLA-F-223ENST00000465459 NRXN2Q9P2S2 1712 aa18.56■□□□□ 0.56
HLA-F-223ENST00000465459 UTYO14607 1347 aa18.55■□□□□ 0.56
HLA-F-223ENST00000465459 GRM8O00222 908 aa18.55■□□□□ 0.56
HLA-F-223ENST00000465459 NPHP1O15259 732 aa18.55■□□□□ 0.56
HLA-F-223ENST00000465459 ST5P78524 1137 aa18.55■□□□□ 0.56
HLA-F-223ENST00000465459 SLC10A5Q5PT55 438 aa18.55■□□□□ 0.56
HLA-F-223ENST00000465459 PRR5LQ6MZQ0 368 aa18.55■□□□□ 0.56
HLA-F-223ENST00000465459 C9orf78Q9NZ63 289 aaPredicted RBP18.55■□□□□ 0.56
HLA-F-223ENST00000465459 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
HLA-F-223ENST00000465459 CDHR2Q9BYE9 1310 aa18.54■□□□□ 0.56
HLA-F-223ENST00000465459 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
HLA-F-223ENST00000465459 USP44Q9H0E7 712 aa18.54■□□□□ 0.56
HLA-F-223ENST00000465459 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
HLA-F-223ENST00000465459 RIC1Q4ADV7 1423 aa18.54■□□□□ 0.56
HLA-F-223ENST00000465459 AFDNP55196 1824 aaKnown RBP18.53■□□□□ 0.56
HLA-F-223ENST00000465459 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
HLA-F-223ENST00000465459 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
HLA-F-223ENST00000465459 ITPRIPQ8IWB1 547 aa18.53■□□□□ 0.56
HLA-F-223ENST00000465459 FAM89AQ96GI7 184 aa18.53■□□□□ 0.56
HLA-F-223ENST00000465459 BRIP1Q9BX63 1249 aa18.53■□□□□ 0.56
HLA-F-223ENST00000465459 GNAI3P08754 354 aa18.52■□□□□ 0.56
HLA-F-223ENST00000465459 CASP7P55210 303 aa18.52■□□□□ 0.56
HLA-F-223ENST00000465459 ERFEQ4G0M1 354 aa18.52■□□□□ 0.56
HLA-F-223ENST00000465459 UBE3BQ7Z3V4 1068 aa18.52■□□□□ 0.56
HLA-F-223ENST00000465459 DDX19BQ9UMR2 479 aa18.52■□□□□ 0.56
HLA-F-223ENST00000465459 PDZRN3Q9UPQ7 1066 aa18.52■□□□□ 0.56
HLA-F-223ENST00000465459 C20orf194Q5TEA3 1177 aa18.51■□□□□ 0.55
HLA-F-223ENST00000465459 NUTM1Q86Y26 1132 aa18.51■□□□□ 0.55
HLA-F-223ENST00000465459 PLA2G12BQ9BX93 195 aa18.51■□□□□ 0.55
HLA-F-223ENST00000465459 C10orf71Q711Q0 1435 aa18.5■□□□□ 0.55
HLA-F-223ENST00000465459 IRS4O14654 1257 aaPredicted RBP18.5■□□□□ 0.55
HLA-F-223ENST00000465459 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
HLA-F-223ENST00000465459 CD2APQ9Y5K6 639 aa18.5■□□□□ 0.55
HLA-F-223ENST00000465459 KLRG2A4D1S0 409 aaPredicted RBP18.49■□□□□ 0.55
HLA-F-223ENST00000465459 ZBTB7BO15156 539 aaPredicted RBP18.49■□□□□ 0.55
HLA-F-223ENST00000465459 PDE8AO60658 829 aa18.49■□□□□ 0.55
HLA-F-223ENST00000465459 NBPF7P0C2Y1 421 aaPredicted RBP18.49■□□□□ 0.55
HLA-F-223ENST00000465459 UBTFL1P0CB47 393 aaPredicted RBP18.49■□□□□ 0.55
HLA-F-223ENST00000465459 PDE6BP35913 854 aa18.49■□□□□ 0.55
HLA-F-223ENST00000465459 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
HLA-F-223ENST00000465459 ABCC12Q96J65 1359 aa18.48■□□□□ 0.55
HLA-F-223ENST00000465459 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
HLA-F-223ENST00000465459 MEIS3Q99687 375 aa18.48■□□□□ 0.55
HLA-F-223ENST00000465459 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
HLA-F-223ENST00000465459 TGFB2P61812 414 aa18.47■□□□□ 0.55
HLA-F-223ENST00000465459 RTL5Q5HYW3 569 aaPredicted RBP18.47■□□□□ 0.55
HLA-F-223ENST00000465459 LRP5O75197 1615 aa18.46■□□□□ 0.55
HLA-F-223ENST00000465459 AAMPQ13685 434 aa18.46■□□□□ 0.55
HLA-F-223ENST00000465459 SF3B3Q15393 1217 aaKnown RBP18.46■□□□□ 0.55
HLA-F-223ENST00000465459 CRY2Q49AN0 593 aa18.46■□□□□ 0.55
HLA-F-223ENST00000465459 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
HLA-F-223ENST00000465459 PPP1R1BQ9UD71 204 aaPredicted RBP18.46■□□□□ 0.55
HLA-F-223ENST00000465459 KIF13BQ9NQT8 1826 aa18.46■□□□□ 0.55
HLA-F-223ENST00000465459 GNAI2P04899 355 aa18.45■□□□□ 0.54
HLA-F-223ENST00000465459 CCDC24Q8N4L8 307 aa18.45■□□□□ 0.54
HLA-F-223ENST00000465459 LAMB2P55268 1798 aa18.45■□□□□ 0.54
HLA-F-223ENST00000465459 CSF1RP07333 972 aa18.44■□□□□ 0.54
HLA-F-223ENST00000465459 CTSWP56202 376 aa18.44■□□□□ 0.54
HLA-F-223ENST00000465459 FOXO4P98177 505 aa18.44■□□□□ 0.54
HLA-F-223ENST00000465459 KAZALD1Q96I82 304 aa18.44■□□□□ 0.54
HLA-F-223ENST00000465459 SUCLG2Q96I99 432 aa18.44■□□□□ 0.54
HLA-F-223ENST00000465459 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
HLA-F-223ENST00000465459 H0YIN7 160 aa18.43■□□□□ 0.54
HLA-F-223ENST00000465459 HOXA10P31260 410 aaPredicted RBP18.43■□□□□ 0.54
HLA-F-223ENST00000465459 RABL6Q3YEC7 729 aaPredicted RBP18.43■□□□□ 0.54
HLA-F-223ENST00000465459 CCDC152Q4G0S7 254 aa18.43■□□□□ 0.54
HLA-F-223ENST00000465459 TTLL11Q8NHH1 800 aa18.43■□□□□ 0.54
HLA-F-223ENST00000465459 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
HLA-F-223ENST00000465459 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
HLA-F-223ENST00000465459 ANKRD31Q8N7Z5 1873 aa18.42■□□□□ 0.54
HLA-F-223ENST00000465459 SRGNP10124 158 aa18.42■□□□□ 0.54
HLA-F-223ENST00000465459 NPR1P16066 1061 aa18.42■□□□□ 0.54
HLA-F-223ENST00000465459 C2CD5Q86YS7 1000 aa18.42■□□□□ 0.54
HLA-F-223ENST00000465459 CRBNQ96SW2 442 aa18.42■□□□□ 0.54
HLA-F-223ENST00000465459 LRRFIP2Q9Y608 721 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms