RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 GBA2Q9HCG7 927 aaPredicted RBP18.58■□□□□ 0.56
C9orf3-211ENST00000463372 POTEFA5A3E0 1075 aa18.57■□□□□ 0.56
C9orf3-211ENST00000463372 SLC39A6Q13433 755 aa18.57■□□□□ 0.56
C9orf3-211ENST00000463372 INTS3Q68E01 1043 aaKnown RBP18.57■□□□□ 0.56
C9orf3-211ENST00000463372 NPM2Q86SE8 214 aaKnown RBP18.57■□□□□ 0.56
C9orf3-211ENST00000463372 USP48Q86UV5 1035 aa18.57■□□□□ 0.56
C9orf3-211ENST00000463372 VSIG10Q8N0Z9 540 aa18.57■□□□□ 0.56
C9orf3-211ENST00000463372 CENPFP49454 3210 aa18.57■□□□□ 0.56
C9orf3-211ENST00000463372 SLC10A3P09131 477 aa18.56■□□□□ 0.56
C9orf3-211ENST00000463372 SLC52A2Q9HAB3 445 aa18.56■□□□□ 0.56
C9orf3-211ENST00000463372 CC2D2BQ6DHV5 1058 aa18.55■□□□□ 0.56
C9orf3-211ENST00000463372 KLRG2A4D1S0 409 aaPredicted RBP18.54■□□□□ 0.56
C9orf3-211ENST00000463372 SLC24A1O60721 1099 aa18.53■□□□□ 0.56
C9orf3-211ENST00000463372 TBC1D8O95759 1140 aa18.53■□□□□ 0.56
C9orf3-211ENST00000463372 GMPSP49915 693 aaPredicted RBP18.53■□□□□ 0.56
C9orf3-211ENST00000463372 SNED1Q8TER0 1413 aa18.53■□□□□ 0.56
C9orf3-211ENST00000463372 HIRAP54198 1017 aaPredicted RBP18.52■□□□□ 0.56
C9orf3-211ENST00000463372 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.56
C9orf3-211ENST00000463372 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.56
C9orf3-211ENST00000463372 HTTP42858 3142 aa18.51■□□□□ 0.55
C9orf3-211ENST00000463372 OTUD5Q96G74 571 aa18.51■□□□□ 0.55
C9orf3-211ENST00000463372 POLKQ9UBT6 870 aa18.51■□□□□ 0.55
C9orf3-211ENST00000463372 NPC1L1Q9UHC9 1359 aa18.51■□□□□ 0.55
C9orf3-211ENST00000463372 BRCA2P51587 3418 aa18.51■□□□□ 0.55
C9orf3-211ENST00000463372 CDHR2Q9BYE9 1310 aa18.5■□□□□ 0.55
C9orf3-211ENST00000463372 UBR2Q8IWV8 1755 aa18.5■□□□□ 0.55
C9orf3-211ENST00000463372 RANBP2P49792 3224 aaKnown RBP18.5■□□□□ 0.55
C9orf3-211ENST00000463372 CAMTA2O94983 1202 aa18.5■□□□□ 0.55
C9orf3-211ENST00000463372 DLK2Q6UY11 383 aa18.5■□□□□ 0.55
C9orf3-211ENST00000463372 TPTE2Q6XPS3 522 aa18.5■□□□□ 0.55
C9orf3-211ENST00000463372 TRPM4Q8TD43 1214 aa18.5■□□□□ 0.55
C9orf3-211ENST00000463372 GPR25O00155 361 aa18.49■□□□□ 0.55
C9orf3-211ENST00000463372 PPIP5K2O43314 1243 aa18.49■□□□□ 0.55
C9orf3-211ENST00000463372 IL6STP40189 918 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-211ENST00000463372 CHRDL2Q6WN34 429 aa18.49■□□□□ 0.55
C9orf3-211ENST00000463372 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
C9orf3-211ENST00000463372 TESK2Q96S53 571 aa18.49■□□□□ 0.55
C9orf3-211ENST00000463372 H0YGN5 161 aa18.48■□□□□ 0.55
C9orf3-211ENST00000463372 CXCL9Q07325 125 aa18.48■□□□□ 0.55
C9orf3-211ENST00000463372 NOM1Q5C9Z4 860 aaKnown RBP18.48■□□□□ 0.55
C9orf3-211ENST00000463372 FKTNO75072 461 aa18.47■□□□□ 0.55
C9orf3-211ENST00000463372 EN2P19622 333 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-211ENST00000463372 H7C1D1 291 aa18.46■□□□□ 0.55
C9orf3-211ENST00000463372 ZNRF3Q9ULT6 936 aa18.46■□□□□ 0.55
C9orf3-211ENST00000463372 MRC1P22897 1456 aa18.46■□□□□ 0.54
C9orf3-211ENST00000463372 AOC3Q16853 763 aa18.45■□□□□ 0.54
C9orf3-211ENST00000463372 DZIP3Q86Y13 1208 aaKnown RBP18.45■□□□□ 0.54
C9orf3-211ENST00000463372 RASAL3Q86YV0 1011 aa18.45■□□□□ 0.54
C9orf3-211ENST00000463372 TTC5Q8N0Z6 440 aa18.45■□□□□ 0.54
C9orf3-211ENST00000463372 TEX13AQ9BXU3 409 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-211ENST00000463372 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
C9orf3-211ENST00000463372 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
C9orf3-211ENST00000463372 DCPSQ96C86 337 aaKnown RBP18.44■□□□□ 0.54
C9orf3-211ENST00000463372 RBM27Q9P2N5 1060 aaKnown RBP18.44■□□□□ 0.54
C9orf3-211ENST00000463372 ZNF652Q9Y2D9 606 aa18.44■□□□□ 0.54
C9orf3-211ENST00000463372 UNC80Q8N2C7 3258 aa18.44■□□□□ 0.54
C9orf3-211ENST00000463372 GTF2E1P29083 439 aaPredicted RBP18.43■□□□□ 0.54
C9orf3-211ENST00000463372 TNIP1Q15025 636 aa18.43■□□□□ 0.54
C9orf3-211ENST00000463372 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
C9orf3-211ENST00000463372 VPS33BQ9H267 617 aa18.43■□□□□ 0.54
C9orf3-211ENST00000463372 FAM177BA6PVY3 158 aa18.42■□□□□ 0.54
C9orf3-211ENST00000463372 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
C9orf3-211ENST00000463372 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
C9orf3-211ENST00000463372 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
C9orf3-211ENST00000463372 ADM5C9JUS6 153 aa18.41■□□□□ 0.54
C9orf3-211ENST00000463372 RNMTO43148 476 aaKnown RBP18.41■□□□□ 0.54
C9orf3-211ENST00000463372 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
C9orf3-211ENST00000463372 TMEM106CQ9BVX2 250 aa18.41■□□□□ 0.54
C9orf3-211ENST00000463372 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
C9orf3-211ENST00000463372 TRIM17Q9Y577 477 aa18.41■□□□□ 0.54
C9orf3-211ENST00000463372 MICALL2Q8IY33 904 aa18.4■□□□□ 0.54
C9orf3-211ENST00000463372 RPGRQ92834 1020 aaKnown RBP18.4■□□□□ 0.54
C9orf3-211ENST00000463372 COL25A1Q9BXS0 654 aaPredicted RBP18.4■□□□□ 0.54
C9orf3-211ENST00000463372 NIP7Q9Y221 180 aaKnown RBP eCLIP18.4■□□□□ 0.54
C9orf3-211ENST00000463372 SHTN1A0MZ66 631 aa18.39■□□□□ 0.53
C9orf3-211ENST00000463372 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
C9orf3-211ENST00000463372 RAD17O75943 681 aa18.39■□□□□ 0.53
C9orf3-211ENST00000463372 CARD14Q9BXL6 1004 aa18.39■□□□□ 0.53
C9orf3-211ENST00000463372 A1BGP04217 495 aa18.38■□□□□ 0.53
C9orf3-211ENST00000463372 CRY2Q49AN0 593 aa18.38■□□□□ 0.53
C9orf3-211ENST00000463372 PPEF1O14829 653 aaPredicted RBP18.37■□□□□ 0.53
C9orf3-211ENST00000463372 SULT6B1Q6IMI4 303 aa18.37■□□□□ 0.53
C9orf3-211ENST00000463372 SAMD7Q7Z3H4 446 aa18.37■□□□□ 0.53
C9orf3-211ENST00000463372 SULF1Q8IWU6 871 aa18.37■□□□□ 0.53
C9orf3-211ENST00000463372 SUPT20HQ8NEM7 779 aa18.37■□□□□ 0.53
C9orf3-211ENST00000463372 HEG1Q9ULI3 1381 aa18.37■□□□□ 0.53
C9orf3-211ENST00000463372 TM4SF4P48230 202 aa18.36■□□□□ 0.53
C9orf3-211ENST00000463372 OTOP1Q7RTM1 612 aa18.36■□□□□ 0.53
C9orf3-211ENST00000463372 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
C9orf3-211ENST00000463372 ZNF496Q96IT1 587 aaPredicted RBP18.35■□□□□ 0.53
C9orf3-211ENST00000463372 FKBP1BP68106 108 aa18.34■□□□□ 0.53
C9orf3-211ENST00000463372 ARMC5Q96C12 935 aa18.34■□□□□ 0.53
C9orf3-211ENST00000463372 CFHR5Q9BXR6 569 aa18.34■□□□□ 0.53
C9orf3-211ENST00000463372 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.53
C9orf3-211ENST00000463372 HOXA10P31260 410 aaPredicted RBP18.33■□□□□ 0.52
C9orf3-211ENST00000463372 SREBF2Q12772 1141 aa18.33■□□□□ 0.52
C9orf3-211ENST00000463372 RBM26Q5T8P6 1007 aaKnown RBP18.33■□□□□ 0.52
C9orf3-211ENST00000463372 CDCA5Q96FF9 252 aa18.33■□□□□ 0.52
C9orf3-211ENST00000463372 RBM17Q96I25 401 aaKnown RBP18.33■□□□□ 0.52
C9orf3-211ENST00000463372 PTPN22Q9Y2R2 807 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms