RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CDK11BP21127 795 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 NUCB2P80303 420 aa13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 DNAJC2Q99543 621 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC3-205ENST00000462715 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 SSFA2P28290 1259 aa13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 ZSCAN23Q3MJ62 389 aa13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 TSPYL1Q9H0U9 437 aa13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 QSER1Q2KHR3 1735 aa13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 R3HDM1Q15032 1099 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 KRT24Q2M2I5 525 aa13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 INTS5Q6P9B9 1019 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 CREBRFQ8IUR6 639 aa13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 KIF3AQ9Y496 699 aa13.9□□□□□ -0.18
TRAPPC3-205ENST00000462715 CCDC66A2RUB6 948 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 RPS6KA4O75676 772 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 ADRA2BP18089 450 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 MFAP1P55081 439 aaKnown RBP13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 K7ELQ4 463 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 EIF2S2P20042 333 aaKnown RBP13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 SYCP1Q15431 976 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 HDGFL1Q5TGJ6 251 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 C8orf58Q8NAV2 365 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 ZBTB1Q9Y2K1 713 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 COG6Q9Y2V7 657 aa13.89□□□□□ -0.19
TRAPPC3-205ENST00000462715 MYH14Q7Z406 1995 aaKnown RBP13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 RBSNQ9H1K0 784 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 PHF14O94880 888 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 A1BGP04217 495 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 CBX1P83916 185 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 TWISTNBQ3B726 338 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 TRAPPC3LQ5T215 181 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 LRSAM1Q6UWE0 723 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 OGFRQ9NZT2 677 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 PCDHB15Q9Y5E8 787 aa13.88□□□□□ -0.19
TRAPPC3-205ENST00000462715 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
TRAPPC3-205ENST00000462715 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
TRAPPC3-205ENST00000462715 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-205ENST00000462715 EXOSC9Q06265 439 aaKnown RBP13.87□□□□□ -0.19
TRAPPC3-205ENST00000462715 A0A087WZG4 1122 aa13.86□□□□□ -0.19
TRAPPC3-205ENST00000462715 ANKRD7Q92527 254 aa13.86□□□□□ -0.19
TRAPPC3-205ENST00000462715 SPTLC3Q9NUV7 552 aa13.86□□□□□ -0.19
TRAPPC3-205ENST00000462715 COL15A1P39059 1388 aa13.86□□□□□ -0.19
TRAPPC3-205ENST00000462715 CCDC30Q5VVM6 783 aa13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 TSPYL6Q8N831 410 aa13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 ZNF830Q96NB3 372 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 ZNF330Q9Y3S2 320 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 RFC4P35249 363 aa13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 EIF5P55010 431 aaKnown RBP13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 ATP2B3Q16720 1220 aa13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 UVSSAQ2YD98 709 aa13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 DBF4Q9UBU7 674 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC3-205ENST00000462715 CHRM1P11229 460 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 DNTTIP2Q5QJE6 756 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 AMIGO3Q86WK7 504 aa13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 COL23A1Q86Y22 540 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 CWC22Q9HCG8 908 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 LMBRD1Q9NUN5 540 aa13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 NBPF10Q6P3W6 841 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 TEX2Q8IWB9 1127 aa13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 DDX21Q9NR30 783 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAPPC3-205ENST00000462715 CYP2E1P05181 493 aaPredicted RBP13.83□□□□□ -0.19
TRAPPC3-205ENST00000462715 MYL6BP14649 208 aa13.83□□□□□ -0.19
TRAPPC3-205ENST00000462715 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.19
TRAPPC3-205ENST00000462715 STK31Q9BXU1 1019 aa13.83□□□□□ -0.19
TRAPPC3-205ENST00000462715 CHPF2Q9P2E5 772 aa13.83□□□□□ -0.19
TRAPPC3-205ENST00000462715 CASZ1Q86V15 1759 aa13.83□□□□□ -0.2
TRAPPC3-205ENST00000462715 ZPR1O75312 459 aa13.83□□□□□ -0.2
TRAPPC3-205ENST00000462715 VAMP4O75379 141 aa13.83□□□□□ -0.2
TRAPPC3-205ENST00000462715 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC3-205ENST00000462715 MBD3O95983 291 aa13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 SMIM5Q71RC9 77 aa13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 ZNF428Q96B54 188 aa13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 HYPKQ9NX55 129 aa13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 C4AP0C0L4 1744 aa13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 PDIA6Q15084 440 aa13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
TRAPPC3-205ENST00000462715 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAPPC3-205ENST00000462715 KIF6Q6ZMV9 814 aa13.81□□□□□ -0.2
TRAPPC3-205ENST00000462715 DZIP3Q86Y13 1208 aaKnown RBP13.81□□□□□ -0.2
TRAPPC3-205ENST00000462715 NARFQ9UHQ1 456 aa13.81□□□□□ -0.2
TRAPPC3-205ENST00000462715 USP42Q9H9J4 1324 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms