RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 LINS1Q8NG48 757 aa14.98□□□□□ -0.01
CPNE1-221ENST00000462352 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
CPNE1-221ENST00000462352 API5Q9BZZ5 524 aaKnown RBP14.98□□□□□ -0.01
CPNE1-221ENST00000462352 FHDC1Q9C0D6 1143 aaPredicted RBP14.98□□□□□ -0.01
CPNE1-221ENST00000462352 CWC25Q9NXE8 425 aaPredicted RBP14.98□□□□□ -0.01
CPNE1-221ENST00000462352 TRMT112Q9UI30 125 aaKnown RBP14.98□□□□□ -0.01
CPNE1-221ENST00000462352 RNF123Q5XPI4 1314 aa14.97□□□□□ -0.01
CPNE1-221ENST00000462352 IPO8O15397 1037 aaKnown RBP14.97□□□□□ -0.01
CPNE1-221ENST00000462352 GTF2E1P29083 439 aaPredicted RBP14.97□□□□□ -0.01
CPNE1-221ENST00000462352 ST5P78524 1137 aa14.97□□□□□ -0.01
CPNE1-221ENST00000462352 ERFEQ4G0M1 354 aa14.97□□□□□ -0.01
CPNE1-221ENST00000462352 CD2APQ9Y5K6 639 aa14.97□□□□□ -0.01
CPNE1-221ENST00000462352 PXDNLA1KZ92 1463 aa14.96□□□□□ -0.01
CPNE1-221ENST00000462352 TRIM27P14373 513 aa14.96□□□□□ -0.01
CPNE1-221ENST00000462352 ZKSCAN2Q63HK3 967 aa14.96□□□□□ -0.01
CPNE1-221ENST00000462352 ATF7IPQ6VMQ6 1270 aa14.96□□□□□ -0.01
CPNE1-221ENST00000462352 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
CPNE1-221ENST00000462352 ABCC12Q96J65 1359 aa14.96□□□□□ -0.02
CPNE1-221ENST00000462352 SH3TC1Q8TE82 1336 aa14.95□□□□□ -0.02
CPNE1-221ENST00000462352 KIF13BQ9NQT8 1826 aa14.95□□□□□ -0.02
CPNE1-221ENST00000462352 GCKRQ14397 625 aa14.95□□□□□ -0.02
CPNE1-221ENST00000462352 FAM89AQ96GI7 184 aa14.95□□□□□ -0.02
CPNE1-221ENST00000462352 SYT17Q9BSW7 474 aa14.95□□□□□ -0.02
CPNE1-221ENST00000462352 BRIP1Q9BX63 1249 aa14.95□□□□□ -0.02
CPNE1-221ENST00000462352 TNNQ9UQP3 1299 aa14.95□□□□□ -0.02
CPNE1-221ENST00000462352 ABCC4O15439 1325 aa14.94□□□□□ -0.02
CPNE1-221ENST00000462352 ALDH1L1O75891 902 aa14.94□□□□□ -0.02
CPNE1-221ENST00000462352 PCCAP05165 728 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-221ENST00000462352 RTL5Q5HYW3 569 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-221ENST00000462352 SYNE4Q8N205 404 aa14.94□□□□□ -0.02
CPNE1-221ENST00000462352 ZBTB38Q8NAP3 1195 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-221ENST00000462352 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
CPNE1-221ENST00000462352 RIC1Q4ADV7 1423 aa14.93□□□□□ -0.02
CPNE1-221ENST00000462352 ANKRD31Q8N7Z5 1873 aa14.93□□□□□ -0.02
CPNE1-221ENST00000462352 PDE6BP35913 854 aa14.93□□□□□ -0.02
CPNE1-221ENST00000462352 TGFB2P61812 414 aa14.93□□□□□ -0.02
CPNE1-221ENST00000462352 SLC10A5Q5PT55 438 aa14.93□□□□□ -0.02
CPNE1-221ENST00000462352 JARID2Q92833 1246 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-221ENST00000462352 CLUAP1Q96AJ1 413 aa14.93□□□□□ -0.02
CPNE1-221ENST00000462352 H7C1W4 665 aa14.92□□□□□ -0.02
CPNE1-221ENST00000462352 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-221ENST00000462352 CCT4P50991 539 aaKnown RBP14.92□□□□□ -0.02
CPNE1-221ENST00000462352 TNRC6CQ9HCJ0 1690 aaKnown RBP14.92□□□□□ -0.02
CPNE1-221ENST00000462352 KIAA1551Q9HCM1 1747 aa14.92□□□□□ -0.02
CPNE1-221ENST00000462352 A0A0G2JLW4 131 aa14.91□□□□□ -0.02
CPNE1-221ENST00000462352 KLRG2A4D1S0 409 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-221ENST00000462352 IRS4O14654 1257 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-221ENST00000462352 PLIN1O60240 522 aa14.91□□□□□ -0.02
CPNE1-221ENST00000462352 DPEP1P16444 411 aa14.91□□□□□ -0.02
CPNE1-221ENST00000462352 CHRNA5P30532 468 aa14.91□□□□□ -0.02
CPNE1-221ENST00000462352 INTS3Q68E01 1043 aaKnown RBP14.91□□□□□ -0.02
CPNE1-221ENST00000462352 UBE3BQ7Z3V4 1068 aa14.91□□□□□ -0.02
CPNE1-221ENST00000462352 CDHR2Q9BYE9 1310 aa14.91□□□□□ -0.02
CPNE1-221ENST00000462352 H0YIN7 160 aa14.9□□□□□ -0.02
CPNE1-221ENST00000462352 GRM8O00222 908 aa14.9□□□□□ -0.02
CPNE1-221ENST00000462352 CASP7P55210 303 aa14.9□□□□□ -0.02
CPNE1-221ENST00000462352 C3orf67Q6ZVT6 689 aa14.9□□□□□ -0.02
CPNE1-221ENST00000462352 C2CD5Q86YS7 1000 aa14.9□□□□□ -0.02
CPNE1-221ENST00000462352 FTSJ3Q8IY81 847 aaKnown RBP14.9□□□□□ -0.02
CPNE1-221ENST00000462352 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
CPNE1-221ENST00000462352 NLRP3Q96P20 1036 aa14.9□□□□□ -0.02
CPNE1-221ENST00000462352 C9orf78Q9NZ63 289 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-221ENST00000462352 PDZRN3Q9UPQ7 1066 aa14.9□□□□□ -0.02
CPNE1-221ENST00000462352 N4BP2Q86UW6 1770 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-221ENST00000462352 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
CPNE1-221ENST00000462352 RLBP1P12271 317 aa14.89□□□□□ -0.03
CPNE1-221ENST00000462352 HSP90B1P14625 803 aaKnown RBP14.89□□□□□ -0.03
CPNE1-221ENST00000462352 KCNA3P22001 575 aa14.89□□□□□ -0.03
CPNE1-221ENST00000462352 CRY2Q49AN0 593 aa14.89□□□□□ -0.03
CPNE1-221ENST00000462352 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-221ENST00000462352 COL11A2P13942 1736 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-221ENST00000462352 LAMB2P55268 1798 aa14.88□□□□□ -0.03
CPNE1-221ENST00000462352 PDE8AO60658 829 aa14.88□□□□□ -0.03
CPNE1-221ENST00000462352 NBPF7P0C2Y1 421 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-221ENST00000462352 SRGNP10124 158 aa14.88□□□□□ -0.03
CPNE1-221ENST00000462352 TMEM57Q8N5G2 664 aa14.88□□□□□ -0.03
CPNE1-221ENST00000462352 USP44Q9H0E7 712 aa14.88□□□□□ -0.03
CPNE1-221ENST00000462352 UTYO14607 1347 aa14.88□□□□□ -0.03
CPNE1-221ENST00000462352 MS4A1P11836 297 aa14.87□□□□□ -0.03
CPNE1-221ENST00000462352 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
CPNE1-221ENST00000462352 ZNF622Q969S3 477 aaKnown RBP eCLIP14.87□□□□□ -0.03
CPNE1-221ENST00000462352 MASTLQ96GX5 879 aa14.87□□□□□ -0.03
CPNE1-221ENST00000462352 DLEC1Q9Y238 1755 aa14.86□□□□□ -0.03
CPNE1-221ENST00000462352 NPR1P16066 1061 aa14.86□□□□□ -0.03
CPNE1-221ENST00000462352 RRP1P56182 461 aaKnown RBP14.86□□□□□ -0.03
CPNE1-221ENST00000462352 SF3B3Q15393 1217 aaKnown RBP14.86□□□□□ -0.03
CPNE1-221ENST00000462352 STYK1Q6J9G0 422 aa14.86□□□□□ -0.03
CPNE1-221ENST00000462352 RPGRQ92834 1020 aaKnown RBP14.86□□□□□ -0.03
CPNE1-221ENST00000462352 PLA2G12BQ9BX93 195 aa14.86□□□□□ -0.03
CPNE1-221ENST00000462352 PIM2Q9P1W9 311 aa14.86□□□□□ -0.03
CPNE1-221ENST00000462352 WWC3Q9ULE0 1092 aa14.86□□□□□ -0.03
CPNE1-221ENST00000462352 HOXA10P31260 410 aaPredicted RBP14.85□□□□□ -0.03
CPNE1-221ENST00000462352 CTSWP56202 376 aa14.85□□□□□ -0.03
CPNE1-221ENST00000462352 ITPRIPQ8IWB1 547 aa14.85□□□□□ -0.03
CPNE1-221ENST00000462352 SUCLG2Q96I99 432 aa14.85□□□□□ -0.03
CPNE1-221ENST00000462352 MEIS3Q99687 375 aa14.85□□□□□ -0.03
CPNE1-221ENST00000462352 UBTFL1P0CB47 393 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-221ENST00000462352 FOXO4P98177 505 aa14.84□□□□□ -0.03
CPNE1-221ENST00000462352 PDE3AQ14432 1141 aa14.84□□□□□ -0.03
CPNE1-221ENST00000462352 C20orf194Q5TEA3 1177 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms