RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 RPGRQ92834 1020 aaKnown RBP26.34■■□□□ 1.81
SCAF8-204ENST00000461219 PHAXQ9H814 394 aaKnown RBP26.34■■□□□ 1.81
SCAF8-204ENST00000461219 TCERG1O14776 1098 aaKnown RBP26.33■■□□□ 1.81
SCAF8-204ENST00000461219 ABCC12Q96J65 1359 aa26.33■■□□□ 1.8
SCAF8-204ENST00000461219 NTSR2O95665 410 aa26.32■■□□□ 1.8
SCAF8-204ENST00000461219 TRMT112Q9UI30 125 aaKnown RBP26.32■■□□□ 1.8
SCAF8-204ENST00000461219 C21orf2O43822 256 aa26.31■■□□□ 1.8
SCAF8-204ENST00000461219 EXOSC9Q06265 439 aaKnown RBP26.31■■□□□ 1.8
SCAF8-204ENST00000461219 PRPF40BQ6NWY9 871 aaKnown RBP26.31■■□□□ 1.8
SCAF8-204ENST00000461219 NLRP10Q86W26 655 aa26.31■■□□□ 1.8
SCAF8-204ENST00000461219 RNF123Q5XPI4 1314 aa26.31■■□□□ 1.8
SCAF8-204ENST00000461219 ATP5J2-PTCD1G3V325 749 aa26.3■■□□□ 1.8
SCAF8-204ENST00000461219 ALDH1B1P30837 517 aa26.3■■□□□ 1.8
SCAF8-204ENST00000461219 NLRP3Q96P20 1036 aa26.3■■□□□ 1.8
SCAF8-204ENST00000461219 SOGA3Q5TF21 947 aa26.29■■□□□ 1.8
SCAF8-204ENST00000461219 ZNF428Q96B54 188 aa26.29■■□□□ 1.8
SCAF8-204ENST00000461219 LAMB2P55268 1798 aa26.28■■□□□ 1.8
SCAF8-204ENST00000461219 SLC4A2P04920 1241 aa26.28■■□□□ 1.8
SCAF8-204ENST00000461219 C9orf131Q5VYM1 1079 aa26.28■■□□□ 1.8
SCAF8-204ENST00000461219 ZNF526Q8TF50 670 aaPredicted RBP26.28■■□□□ 1.8
SCAF8-204ENST00000461219 RNF181Q9P0P0 153 aa26.28■■□□□ 1.8
SCAF8-204ENST00000461219 SH3TC1Q8TE82 1336 aa26.28■■□□□ 1.8
SCAF8-204ENST00000461219 FER1L6Q2WGJ9 1857 aa26.28■■□□□ 1.8
SCAF8-204ENST00000461219 KLRG2A4D1S0 409 aaPredicted RBP26.27■■□□□ 1.8
SCAF8-204ENST00000461219 RASSF7Q02833 373 aa26.27■■□□□ 1.8
SCAF8-204ENST00000461219 MIER1Q8N108 512 aa26.27■■□□□ 1.8
SCAF8-204ENST00000461219 RBM17Q96I25 401 aaKnown RBP26.27■■□□□ 1.8
SCAF8-204ENST00000461219 MYD88Q99836 296 aa26.27■■□□□ 1.8
SCAF8-204ENST00000461219 RIC1Q4ADV7 1423 aa26.27■■□□□ 1.8
SCAF8-204ENST00000461219 SPINK5Q9NQ38 1064 aaPredicted RBP26.26■■□□□ 1.79
SCAF8-204ENST00000461219 NEXNQ0ZGT2 675 aa26.25■■□□□ 1.79
SCAF8-204ENST00000461219 GPBP1L1Q9HC44 474 aaPredicted RBP26.25■■□□□ 1.79
SCAF8-204ENST00000461219 ISCA1Q9BUE6 129 aa26.24■■□□□ 1.79
SCAF8-204ENST00000461219 TMX4Q9H1E5 349 aaPredicted RBP26.24■■□□□ 1.79
SCAF8-204ENST00000461219 MAP3K2Q9Y2U5 619 aa26.24■■□□□ 1.79
SCAF8-204ENST00000461219 VAMP4O75379 141 aa26.23■■□□□ 1.79
SCAF8-204ENST00000461219 HCLS1P14317 486 aaPredicted RBP26.23■■□□□ 1.79
SCAF8-204ENST00000461219 CRY2Q49AN0 593 aa26.23■■□□□ 1.79
SCAF8-204ENST00000461219 DDX60Q8IY21 1712 aaKnown RBP26.22■■□□□ 1.79
SCAF8-204ENST00000461219 ADCY9O60503 1353 aa26.22■■□□□ 1.79
SCAF8-204ENST00000461219 DICER1Q9UPY3 1922 aaKnown RBP26.22■■□□□ 1.79
SCAF8-204ENST00000461219 E9PSI1 815 aa26.22■■□□□ 1.79
SCAF8-204ENST00000461219 LMNB1P20700 586 aa26.22■■□□□ 1.79
SCAF8-204ENST00000461219 FKBP5Q13451 457 aaPredicted RBP26.22■■□□□ 1.79
SCAF8-204ENST00000461219 CCDC93Q567U6 631 aa26.22■■□□□ 1.79
SCAF8-204ENST00000461219 RTL5Q5HYW3 569 aaPredicted RBP26.22■■□□□ 1.79
SCAF8-204ENST00000461219 SLC10A5Q5PT55 438 aa26.22■■□□□ 1.79
SCAF8-204ENST00000461219 KSR2Q6VAB6 950 aa26.22■■□□□ 1.79
SCAF8-204ENST00000461219 TIAM2Q8IVF5 1701 aa26.22■■□□□ 1.79
SCAF8-204ENST00000461219 ZNF521Q96K83 1311 aa26.21■■□□□ 1.79
SCAF8-204ENST00000461219 PI4KAP2A4QPH2 592 aa26.21■■□□□ 1.79
SCAF8-204ENST00000461219 PI4KAP1Q8N8J0 262 aa26.21■■□□□ 1.79
SCAF8-204ENST00000461219 FAM89AQ96GI7 184 aa26.21■■□□□ 1.79
SCAF8-204ENST00000461219 METTL22Q9BUU2 404 aaPredicted RBP26.21■■□□□ 1.79
SCAF8-204ENST00000461219 TAOK3Q9H2K8 898 aa26.21■■□□□ 1.79
SCAF8-204ENST00000461219 HSP90B1P14625 803 aaKnown RBP26.2■■□□□ 1.78
SCAF8-204ENST00000461219 FLIIQ13045 1269 aa26.19■■□□□ 1.78
SCAF8-204ENST00000461219 TRIM28Q13263 835 aaKnown RBP26.19■■□□□ 1.78
SCAF8-204ENST00000461219 SYNE4Q8N205 404 aa26.19■■□□□ 1.78
SCAF8-204ENST00000461219 CWC25Q9NXE8 425 aaPredicted RBP26.19■■□□□ 1.78
SCAF8-204ENST00000461219 NFKBIEO00221 500 aa26.18■■□□□ 1.78
SCAF8-204ENST00000461219 DDX46Q7L014 1031 aaKnown RBP26.18■■□□□ 1.78
SCAF8-204ENST00000461219 G2E3Q7L622 706 aa26.18■■□□□ 1.78
SCAF8-204ENST00000461219 RTKN2Q8IZC4 609 aa26.18■■□□□ 1.78
SCAF8-204ENST00000461219 CCDC191Q8NCU4 936 aa26.18■■□□□ 1.78
SCAF8-204ENST00000461219 CRAMP1Q96RY5 1269 aa26.18■■□□□ 1.78
SCAF8-204ENST00000461219 PPEF1O14829 653 aaPredicted RBP26.17■■□□□ 1.78
SCAF8-204ENST00000461219 HOXA10P31260 410 aaPredicted RBP26.17■■□□□ 1.78
SCAF8-204ENST00000461219 C3orf67Q6ZVT6 689 aa26.17■■□□□ 1.78
SCAF8-204ENST00000461219 TAF1P21675 1872 aa26.17■■□□□ 1.78
SCAF8-204ENST00000461219 IRS4O14654 1257 aaPredicted RBP26.16■■□□□ 1.78
SCAF8-204ENST00000461219 ZBTB38Q8NAP3 1195 aaPredicted RBP26.16■■□□□ 1.78
SCAF8-204ENST00000461219 MYH3P11055 1940 aa26.16■■□□□ 1.78
SCAF8-204ENST00000461219 CC2D2BQ6DHV5 1058 aa26.14■■□□□ 1.78
SCAF8-204ENST00000461219 KDM2BQ8NHM5 1336 aa26.14■■□□□ 1.77
SCAF8-204ENST00000461219 LTBP3Q9NS15 1303 aa26.14■■□□□ 1.77
SCAF8-204ENST00000461219 SLFN5Q08AF3 891 aa26.13■■□□□ 1.77
SCAF8-204ENST00000461219 ABCC4O15439 1325 aa26.13■■□□□ 1.77
SCAF8-204ENST00000461219 ZC3H4Q9UPT8 1303 aaKnown RBP26.13■■□□□ 1.77
SCAF8-204ENST00000461219 PCCAP05165 728 aaPredicted RBP26.12■■□□□ 1.77
SCAF8-204ENST00000461219 FKBP4Q02790 459 aaKnown RBP eCLIP26.12■■□□□ 1.77
SCAF8-204ENST00000461219 OLFM4Q6UX06 510 aa26.12■■□□□ 1.77
SCAF8-204ENST00000461219 C7orf43Q8WVR3 580 aa26.12■■□□□ 1.77
SCAF8-204ENST00000461219 DNAAF4Q8WXU2 420 aa26.12■■□□□ 1.77
SCAF8-204ENST00000461219 GRIPAP1Q4V328 841 aa26.11■■□□□ 1.77
SCAF8-204ENST00000461219 BBOX1O75936 387 aa26.1■■□□□ 1.77
SCAF8-204ENST00000461219 CDCA7LQ96GN5 454 aa26.1■■□□□ 1.77
SCAF8-204ENST00000461219 GRAPQ13588 217 aa26.09■■□□□ 1.77
SCAF8-204ENST00000461219 CWF19L2Q2TBE0 894 aaKnown RBP26.09■■□□□ 1.77
SCAF8-204ENST00000461219 GRAPLQ8TC17 118 aaPredicted RBP26.09■■□□□ 1.77
SCAF8-204ENST00000461219 JARID2Q92833 1246 aaPredicted RBP26.09■■□□□ 1.77
SCAF8-204ENST00000461219 NEURL1BA8MQ27 555 aa26.08■■□□□ 1.77
SCAF8-204ENST00000461219 DPY19L2Q6NUT2 758 aa26.08■■□□□ 1.77
SCAF8-204ENST00000461219 ZNF277Q9NRM2 450 aaPredicted RBP26.08■■□□□ 1.77
SCAF8-204ENST00000461219 PDE8AO60658 829 aa26.07■■□□□ 1.76
SCAF8-204ENST00000461219 IGKV5-2P06315 115 aa26.07■■□□□ 1.76
SCAF8-204ENST00000461219 HNRNPUQ00839 825 aaKnown RBP eCLIP26.07■■□□□ 1.76
SCAF8-204ENST00000461219 SF3B3Q15393 1217 aaKnown RBP26.07■■□□□ 1.76
SCAF8-204ENST00000461219 ATP6V0A2Q9Y487 856 aa26.07■■□□□ 1.76
SCAF8-204ENST00000461219 PRELPP51888 382 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms