RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 F6X3S4 739 aa16.38■□□□□ 0.21
COL18A1-206ENST00000459895 NPHP1O15259 732 aa16.38■□□□□ 0.21
COL18A1-206ENST00000459895 ST5P78524 1137 aa16.38■□□□□ 0.21
COL18A1-206ENST00000459895 METTL22Q9BUU2 404 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-206ENST00000459895 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
COL18A1-206ENST00000459895 IGKV5-2P06315 115 aa16.37■□□□□ 0.21
COL18A1-206ENST00000459895 ERFEQ4G0M1 354 aa16.37■□□□□ 0.21
COL18A1-206ENST00000459895 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
COL18A1-206ENST00000459895 PTPRCP08575 1304 aa16.37■□□□□ 0.21
COL18A1-206ENST00000459895 RNF123Q5XPI4 1314 aa16.37■□□□□ 0.21
COL18A1-206ENST00000459895 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
COL18A1-206ENST00000459895 CHRNA5P30532 468 aa16.36■□□□□ 0.21
COL18A1-206ENST00000459895 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
COL18A1-206ENST00000459895 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
COL18A1-206ENST00000459895 PPP1R42Q7Z4L9 355 aa16.35■□□□□ 0.21
COL18A1-206ENST00000459895 UTP14AQ9BVJ6 771 aaKnown RBP16.35■□□□□ 0.21
COL18A1-206ENST00000459895 WWC3Q9ULE0 1092 aa16.35■□□□□ 0.21
COL18A1-206ENST00000459895 TAF1P21675 1872 aa16.35■□□□□ 0.21
COL18A1-206ENST00000459895 A0A1B0GUL6 1792 aa16.34■□□□□ 0.21
COL18A1-206ENST00000459895 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
COL18A1-206ENST00000459895 NEURL1BA8MQ27 555 aa16.34■□□□□ 0.21
COL18A1-206ENST00000459895 BCAR3O75815 825 aa16.34■□□□□ 0.21
COL18A1-206ENST00000459895 DPEP1P16444 411 aa16.34■□□□□ 0.21
COL18A1-206ENST00000459895 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
COL18A1-206ENST00000459895 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
COL18A1-206ENST00000459895 SYNE4Q8N205 404 aa16.34■□□□□ 0.21
COL18A1-206ENST00000459895 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
COL18A1-206ENST00000459895 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-206ENST00000459895 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
COL18A1-206ENST00000459895 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
COL18A1-206ENST00000459895 BRIP1Q9BX63 1249 aa16.33■□□□□ 0.2
COL18A1-206ENST00000459895 CWC25Q9NXE8 425 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-206ENST00000459895 TRMT112Q9UI30 125 aaKnown RBP16.33■□□□□ 0.2
COL18A1-206ENST00000459895 SH3TC1Q8TE82 1336 aa16.33■□□□□ 0.2
COL18A1-206ENST00000459895 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-206ENST00000459895 TGFB2P61812 414 aa16.32■□□□□ 0.2
COL18A1-206ENST00000459895 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-206ENST00000459895 BEND3Q5T5X7 828 aa16.32■□□□□ 0.2
COL18A1-206ENST00000459895 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
COL18A1-206ENST00000459895 TIAM2Q8IVF5 1701 aa16.32■□□□□ 0.2
COL18A1-206ENST00000459895 CCDC191Q8NCU4 936 aa16.32■□□□□ 0.2
COL18A1-206ENST00000459895 NOB1Q9ULX3 412 aaKnown RBP16.32■□□□□ 0.2
COL18A1-206ENST00000459895 ABCC4O15439 1325 aa16.31■□□□□ 0.2
COL18A1-206ENST00000459895 KCNA3P22001 575 aa16.31■□□□□ 0.2
COL18A1-206ENST00000459895 PDE6BP35913 854 aa16.31■□□□□ 0.2
COL18A1-206ENST00000459895 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
COL18A1-206ENST00000459895 LINS1Q8NG48 757 aa16.31■□□□□ 0.2
COL18A1-206ENST00000459895 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
COL18A1-206ENST00000459895 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
COL18A1-206ENST00000459895 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
COL18A1-206ENST00000459895 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL18A1-206ENST00000459895 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
COL18A1-206ENST00000459895 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
COL18A1-206ENST00000459895 LTBP1Q14766 1721 aa16.3■□□□□ 0.2
COL18A1-206ENST00000459895 UTRNP46939 3433 aa16.29■□□□□ 0.2
COL18A1-206ENST00000459895 CDHR2Q9BYE9 1310 aa16.29■□□□□ 0.2
COL18A1-206ENST00000459895 PCCAP05165 728 aaPredicted RBP16.29■□□□□ 0.2
COL18A1-206ENST00000459895 TRIM27P14373 513 aa16.29■□□□□ 0.2
COL18A1-206ENST00000459895 GCKRQ14397 625 aa16.29■□□□□ 0.2
COL18A1-206ENST00000459895 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
COL18A1-206ENST00000459895 ZBTB38Q8NAP3 1195 aaPredicted RBP16.29■□□□□ 0.2
COL18A1-206ENST00000459895 JARID2Q92833 1246 aaPredicted RBP16.29■□□□□ 0.2
COL18A1-206ENST00000459895 KLRG2A4D1S0 409 aaPredicted RBP16.28■□□□□ 0.2
COL18A1-206ENST00000459895 SRGNP10124 158 aa16.28■□□□□ 0.2
COL18A1-206ENST00000459895 UBE3BQ7Z3V4 1068 aa16.28■□□□□ 0.2
COL18A1-206ENST00000459895 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
COL18A1-206ENST00000459895 H0YIN7 160 aa16.27■□□□□ 0.2
COL18A1-206ENST00000459895 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
COL18A1-206ENST00000459895 CASP7P55210 303 aa16.27■□□□□ 0.2
COL18A1-206ENST00000459895 SLC51AQ86UW1 340 aa16.27■□□□□ 0.2
COL18A1-206ENST00000459895 API5Q9BZZ5 524 aaKnown RBP16.27■□□□□ 0.2
COL18A1-206ENST00000459895 SRCIN1Q9C0H9 1055 aa16.27■□□□□ 0.2
COL18A1-206ENST00000459895 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
COL18A1-206ENST00000459895 SLC10A5Q5PT55 438 aa16.26■□□□□ 0.19
COL18A1-206ENST00000459895 STYK1Q6J9G0 422 aa16.26■□□□□ 0.19
COL18A1-206ENST00000459895 RCAN3Q9UKA8 241 aa16.26■□□□□ 0.19
COL18A1-206ENST00000459895 SNED1Q8TER0 1413 aa16.26■□□□□ 0.19
COL18A1-206ENST00000459895 ALDH1L1O75891 902 aa16.25■□□□□ 0.19
COL18A1-206ENST00000459895 NPR1P16066 1061 aa16.25■□□□□ 0.19
COL18A1-206ENST00000459895 PRPF40BQ6NWY9 871 aaKnown RBP16.25■□□□□ 0.19
COL18A1-206ENST00000459895 ATF7IPQ6VMQ6 1270 aa16.25■□□□□ 0.19
COL18A1-206ENST00000459895 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
COL18A1-206ENST00000459895 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL18A1-206ENST00000459895 MASTLQ96GX5 879 aa16.25■□□□□ 0.19
COL18A1-206ENST00000459895 PIM2Q9P1W9 311 aa16.25■□□□□ 0.19
COL18A1-206ENST00000459895 PDZRN3Q9UPQ7 1066 aa16.25■□□□□ 0.19
COL18A1-206ENST00000459895 BCS1LQ9Y276 419 aa16.25■□□□□ 0.19
COL18A1-206ENST00000459895 CHD4Q14839 1912 aa16.25■□□□□ 0.19
COL18A1-206ENST00000459895 GRM8O00222 908 aa16.24■□□□□ 0.19
COL18A1-206ENST00000459895 CTSWP56202 376 aa16.24■□□□□ 0.19
COL18A1-206ENST00000459895 DALRD3Q5D0E6 543 aaKnown RBP16.24■□□□□ 0.19
COL18A1-206ENST00000459895 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
COL18A1-206ENST00000459895 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
COL18A1-206ENST00000459895 H7C1W4 665 aa16.23■□□□□ 0.19
COL18A1-206ENST00000459895 GPR162Q16538 588 aa16.23■□□□□ 0.19
COL18A1-206ENST00000459895 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
COL18A1-206ENST00000459895 NLRP3Q96P20 1036 aa16.23■□□□□ 0.19
COL18A1-206ENST00000459895 SBF1O95248 1867 aa16.22■□□□□ 0.19
COL18A1-206ENST00000459895 UTYO14607 1347 aa16.22■□□□□ 0.19
COL18A1-206ENST00000459895 PDE8AO60658 829 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms