RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 IL16Q14005 1332 aa22.64■■□□□ 1.22
SCARNA2-201ENST00000458748 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.22
SCARNA2-201ENST00000458748 CRY2Q49AN0 593 aa22.64■■□□□ 1.21
SCARNA2-201ENST00000458748 ERFEQ4G0M1 354 aa22.64■■□□□ 1.21
SCARNA2-201ENST00000458748 NUTM1Q86Y26 1132 aa22.64■■□□□ 1.21
SCARNA2-201ENST00000458748 C16orf71Q8IYS4 520 aaPredicted RBP22.64■■□□□ 1.21
SCARNA2-201ENST00000458748 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.21
SCARNA2-201ENST00000458748 RRAGCQ9HB90 399 aa22.64■■□□□ 1.21
SCARNA2-201ENST00000458748 TNRC6CQ9HCJ0 1690 aaKnown RBP22.63■■□□□ 1.21
SCARNA2-201ENST00000458748 NTSR2O95665 410 aa22.63■■□□□ 1.21
SCARNA2-201ENST00000458748 C7orf43Q8WVR3 580 aa22.63■■□□□ 1.21
SCARNA2-201ENST00000458748 ABCC12Q96J65 1359 aa22.63■■□□□ 1.21
SCARNA2-201ENST00000458748 PLBD2Q8NHP8 589 aa22.62■■□□□ 1.21
SCARNA2-201ENST00000458748 RBM46Q8TBY0 533 aaKnown RBP22.62■■□□□ 1.21
SCARNA2-201ENST00000458748 UTP14AQ9BVJ6 771 aaKnown RBP22.62■■□□□ 1.21
SCARNA2-201ENST00000458748 TAOK3Q9H2K8 898 aa22.62■■□□□ 1.21
SCARNA2-201ENST00000458748 TIAM2Q8IVF5 1701 aa22.62■■□□□ 1.21
SCARNA2-201ENST00000458748 APLP1P51693 650 aa22.61■■□□□ 1.21
SCARNA2-201ENST00000458748 TCIRG1Q13488 830 aa22.61■■□□□ 1.21
SCARNA2-201ENST00000458748 CCDC30Q5VVM6 783 aa22.61■■□□□ 1.21
SCARNA2-201ENST00000458748 ANKRD13DQ6ZTN6 518 aa22.61■■□□□ 1.21
SCARNA2-201ENST00000458748 WDR63Q8IWG1 891 aa22.61■■□□□ 1.21
SCARNA2-201ENST00000458748 ELL2O00472 640 aaPredicted RBP22.6■■□□□ 1.21
SCARNA2-201ENST00000458748 HOXA10P31260 410 aaPredicted RBP22.6■■□□□ 1.21
SCARNA2-201ENST00000458748 CCDC93Q567U6 631 aa22.6■■□□□ 1.21
SCARNA2-201ENST00000458748 SLC10A5Q5PT55 438 aa22.6■■□□□ 1.21
SCARNA2-201ENST00000458748 GOLGA2Q08379 1002 aa22.59■■□□□ 1.21
SCARNA2-201ENST00000458748 C8orf58Q8NAV2 365 aa22.59■■□□□ 1.21
SCARNA2-201ENST00000458748 RPGRQ92834 1020 aaKnown RBP22.59■■□□□ 1.21
SCARNA2-201ENST00000458748 NLRP10Q86W26 655 aa22.58■■□□□ 1.21
SCARNA2-201ENST00000458748 RTKN2Q8IZC4 609 aa22.58■■□□□ 1.21
SCARNA2-201ENST00000458748 NLRP3Q96P20 1036 aa22.58■■□□□ 1.21
SCARNA2-201ENST00000458748 GLTPD2A6NH11 291 aa22.57■■□□□ 1.2
SCARNA2-201ENST00000458748 DDX58O95786 925 aaKnown RBP22.57■■□□□ 1.2
SCARNA2-201ENST00000458748 TSR2Q969E8 191 aaKnown RBP22.57■■□□□ 1.2
SCARNA2-201ENST00000458748 CRAMP1Q96RY5 1269 aa22.57■■□□□ 1.2
SCARNA2-201ENST00000458748 STK31Q9BXU1 1019 aa22.57■■□□□ 1.2
SCARNA2-201ENST00000458748 CC2D2BQ6DHV5 1058 aa22.56■■□□□ 1.2
SCARNA2-201ENST00000458748 RIC3Q7Z5B4 369 aa22.56■■□□□ 1.2
SCARNA2-201ENST00000458748 RBM17Q96I25 401 aaKnown RBP22.56■■□□□ 1.2
SCARNA2-201ENST00000458748 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
SCARNA2-201ENST00000458748 FKBP4Q02790 459 aaKnown RBP eCLIP22.55■■□□□ 1.2
SCARNA2-201ENST00000458748 GRIPAP1Q4V328 841 aa22.55■■□□□ 1.2
SCARNA2-201ENST00000458748 DPY19L2Q6NUT2 758 aa22.55■■□□□ 1.2
SCARNA2-201ENST00000458748 TRMT112Q9UI30 125 aaKnown RBP22.55■■□□□ 1.2
SCARNA2-201ENST00000458748 FSTL1Q12841 308 aa22.54■■□□□ 1.2
SCARNA2-201ENST00000458748 TWISTNBQ3B726 338 aaPredicted RBP22.54■■□□□ 1.2
SCARNA2-201ENST00000458748 TMX4Q9H1E5 349 aaPredicted RBP22.54■■□□□ 1.2
SCARNA2-201ENST00000458748 MYH16Q9H6N6 1097 aa22.54■■□□□ 1.2
SCARNA2-201ENST00000458748 SH3TC1Q8TE82 1336 aa22.54■■□□□ 1.2
SCARNA2-201ENST00000458748 HTRA3P83110 453 aa22.53■■□□□ 1.2
SCARNA2-201ENST00000458748 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
SCARNA2-201ENST00000458748 HSP90B1P14625 803 aaKnown RBP22.52■■□□□ 1.2
SCARNA2-201ENST00000458748 VEGFAP15692 232 aaPredicted RBP22.52■■□□□ 1.2
SCARNA2-201ENST00000458748 TRIM28Q13263 835 aaKnown RBP22.52■■□□□ 1.2
SCARNA2-201ENST00000458748 DNAJC5GQ8N7S2 189 aa22.52■■□□□ 1.2
SCARNA2-201ENST00000458748 LAMB2P55268 1798 aa22.52■■□□□ 1.2
SCARNA2-201ENST00000458748 PSMD1Q99460 953 aa22.51■■□□□ 1.19
SCARNA2-201ENST00000458748 FANCIQ9NVI1 1328 aa22.51■■□□□ 1.19
SCARNA2-201ENST00000458748 C3orf67Q6ZVT6 689 aa22.5■■□□□ 1.19
SCARNA2-201ENST00000458748 TSPYL6Q8N831 410 aa22.5■■□□□ 1.19
SCARNA2-201ENST00000458748 SMC1BQ8NDV3 1235 aa22.5■■□□□ 1.19
SCARNA2-201ENST00000458748 PHAXQ9H814 394 aaKnown RBP22.5■■□□□ 1.19
SCARNA2-201ENST00000458748 WDR90Q96KV7 1748 aa22.5■■□□□ 1.19
SCARNA2-201ENST00000458748 SNED1Q8TER0 1413 aa22.49■■□□□ 1.19
SCARNA2-201ENST00000458748 CCER2I3L3R5 266 aa22.49■■□□□ 1.19
SCARNA2-201ENST00000458748 OLFM4Q6UX06 510 aa22.49■■□□□ 1.19
SCARNA2-201ENST00000458748 POTECB2RU33 542 aa22.48■■□□□ 1.19
SCARNA2-201ENST00000458748 PPEF1O14829 653 aaPredicted RBP22.48■■□□□ 1.19
SCARNA2-201ENST00000458748 HCLS1P14317 486 aaPredicted RBP22.48■■□□□ 1.19
SCARNA2-201ENST00000458748 SYNE4Q8N205 404 aa22.48■■□□□ 1.19
SCARNA2-201ENST00000458748 ATP5J2-PTCD1G3V325 749 aa22.47■■□□□ 1.19
SCARNA2-201ENST00000458748 BBOX1O75936 387 aa22.47■■□□□ 1.19
SCARNA2-201ENST00000458748 ZNF277Q9NRM2 450 aaPredicted RBP22.47■■□□□ 1.19
SCARNA2-201ENST00000458748 DDX60Q8IY21 1712 aaKnown RBP22.47■■□□□ 1.19
SCARNA2-201ENST00000458748 IARSP41252 1262 aaKnown RBP22.46■■□□□ 1.19
SCARNA2-201ENST00000458748 NEXNQ0ZGT2 675 aa22.46■■□□□ 1.19
SCARNA2-201ENST00000458748 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
SCARNA2-201ENST00000458748 CACNA1FO60840 1977 aa22.46■■□□□ 1.19
SCARNA2-201ENST00000458748 SLC4A2P04920 1241 aa22.45■■□□□ 1.18
SCARNA2-201ENST00000458748 KSR2Q6VAB6 950 aa22.45■■□□□ 1.18
SCARNA2-201ENST00000458748 CCDC191Q8NCU4 936 aa22.45■■□□□ 1.18
SCARNA2-201ENST00000458748 MYD88Q99836 296 aa22.45■■□□□ 1.18
SCARNA2-201ENST00000458748 ATP6V0A2Q9Y487 856 aa22.45■■□□□ 1.18
SCARNA2-201ENST00000458748 ABCC4O15439 1325 aa22.45■■□□□ 1.18
SCARNA2-201ENST00000458748 FAM89AQ96GI7 184 aa22.44■■□□□ 1.18
SCARNA2-201ENST00000458748 METTL22Q9BUU2 404 aaPredicted RBP22.44■■□□□ 1.18
SCARNA2-201ENST00000458748 DDNO94850 711 aaPredicted RBP22.43■■□□□ 1.18
SCARNA2-201ENST00000458748 EXOSC9Q06265 439 aaKnown RBP22.43■■□□□ 1.18
SCARNA2-201ENST00000458748 SF3B3Q15393 1217 aaKnown RBP22.43■■□□□ 1.18
SCARNA2-201ENST00000458748 TMC4Q7Z404 712 aa22.43■■□□□ 1.18
SCARNA2-201ENST00000458748 ZBTB38Q8NAP3 1195 aaPredicted RBP22.43■■□□□ 1.18
SCARNA2-201ENST00000458748 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
SCARNA2-201ENST00000458748 MAP3K2Q9Y2U5 619 aa22.43■■□□□ 1.18
SCARNA2-201ENST00000458748 GRAPQ13588 217 aa22.42■■□□□ 1.18
SCARNA2-201ENST00000458748 SP8Q8IXZ3 490 aa22.42■■□□□ 1.18
SCARNA2-201ENST00000458748 GRAPLQ8TC17 118 aaPredicted RBP22.42■■□□□ 1.18
SCARNA2-201ENST00000458748 JDP2Q8WYK2 163 aa22.42■■□□□ 1.18
SCARNA2-201ENST00000458748 KLRG1Q96E93 195 aa22.42■■□□□ 1.18
SCARNA2-201ENST00000458748 VPS33BQ9H267 617 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms