RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
RFX3-210ENST00000457373 SLFN5Q08AF3 891 aa12.96□□□□□ -0.33
RFX3-210ENST00000457373 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
RFX3-210ENST00000457373 CNBD1Q8NA66 436 aa12.96□□□□□ -0.33
RFX3-210ENST00000457373 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.34
RFX3-210ENST00000457373 CHRNA5P30532 468 aa12.95□□□□□ -0.34
RFX3-210ENST00000457373 ST5P78524 1137 aa12.95□□□□□ -0.34
RFX3-210ENST00000457373 TPTE2Q6XPS3 522 aa12.95□□□□□ -0.34
RFX3-210ENST00000457373 RIC3Q7Z5B4 369 aa12.95□□□□□ -0.34
RFX3-210ENST00000457373 ZNF34Q8IZ26 560 aa12.95□□□□□ -0.34
RFX3-210ENST00000457373 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
RFX3-210ENST00000457373 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
RFX3-210ENST00000457373 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
RFX3-210ENST00000457373 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
RFX3-210ENST00000457373 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
RFX3-210ENST00000457373 HSP90AB3PQ58FF7 597 aa12.94□□□□□ -0.34
RFX3-210ENST00000457373 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
RFX3-210ENST00000457373 G2E3Q7L622 706 aa12.94□□□□□ -0.34
RFX3-210ENST00000457373 ATP10DQ9P241 1426 aa12.94□□□□□ -0.34
RFX3-210ENST00000457373 UBN2Q6ZU65 1347 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFX3-210ENST00000457373 PPP1R42Q7Z4L9 355 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 C2CD5Q86YS7 1000 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 ZNF428Q96B54 188 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 BRIP1Q9BX63 1249 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 BCS1LQ9Y276 419 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 ARFGEF2Q9Y6D5 1785 aa12.93□□□□□ -0.34
RFX3-210ENST00000457373 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
RFX3-210ENST00000457373 H0YIN7 160 aa12.92□□□□□ -0.34
RFX3-210ENST00000457373 DDX58O95786 925 aaKnown RBP12.92□□□□□ -0.34
RFX3-210ENST00000457373 KCNA3P22001 575 aa12.92□□□□□ -0.34
RFX3-210ENST00000457373 PDE6BP35913 854 aa12.92□□□□□ -0.34
RFX3-210ENST00000457373 ERFEQ4G0M1 354 aa12.92□□□□□ -0.34
RFX3-210ENST00000457373 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
RFX3-210ENST00000457373 PIM2Q9P1W9 311 aa12.92□□□□□ -0.34
RFX3-210ENST00000457373 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
RFX3-210ENST00000457373 ZNF622Q969S3 477 aaKnown RBP eCLIP12.91□□□□□ -0.34
RFX3-210ENST00000457373 MYD88Q99836 296 aa12.91□□□□□ -0.34
RFX3-210ENST00000457373 UTP14AQ9BVJ6 771 aaKnown RBP12.91□□□□□ -0.34
RFX3-210ENST00000457373 BRCA1P38398 1863 aaKnown RBP12.91□□□□□ -0.34
RFX3-210ENST00000457373 PI4KAP2A4QPH2 592 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 RIOK3O14730 519 aaKnown RBP12.9□□□□□ -0.34
RFX3-210ENST00000457373 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 NTSR2O95665 410 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 FLIIQ13045 1269 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 KSR2Q6VAB6 950 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
RFX3-210ENST00000457373 PI4KAP1Q8N8J0 262 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 ISCA1Q9BUE6 129 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 MAP3K2Q9Y2U5 619 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 CACNA1SQ13698 1873 aa12.9□□□□□ -0.34
RFX3-210ENST00000457373 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
RFX3-210ENST00000457373 FKBP5Q13451 457 aaPredicted RBP12.89□□□□□ -0.35
RFX3-210ENST00000457373 DALRD3Q5D0E6 543 aaKnown RBP12.89□□□□□ -0.35
RFX3-210ENST00000457373 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
RFX3-210ENST00000457373 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
RFX3-210ENST00000457373 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
RFX3-210ENST00000457373 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
RFX3-210ENST00000457373 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
RFX3-210ENST00000457373 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
RFX3-210ENST00000457373 ADCY9O60503 1353 aa12.87□□□□□ -0.35
RFX3-210ENST00000457373 IBTKQ9P2D0 1353 aaPredicted RBP12.87□□□□□ -0.35
RFX3-210ENST00000457373 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
RFX3-210ENST00000457373 TTLL6Q8N841 843 aa12.87□□□□□ -0.35
RFX3-210ENST00000457373 MASTLQ96GX5 879 aa12.87□□□□□ -0.35
RFX3-210ENST00000457373 ARFGEF1Q9Y6D6 1849 aa12.87□□□□□ -0.35
RFX3-210ENST00000457373 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
RFX3-210ENST00000457373 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
RFX3-210ENST00000457373 CHD4Q14839 1912 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 SRGNP10124 158 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 HCLS1P14317 486 aaPredicted RBP12.86□□□□□ -0.35
RFX3-210ENST00000457373 NEXNQ0ZGT2 675 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 ARHGAP27Q6ZUM4 889 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
RFX3-210ENST00000457373 DNAAF4Q8WXU2 420 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 JARID2Q92833 1246 aaPredicted RBP12.86□□□□□ -0.35
RFX3-210ENST00000457373 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
RFX3-210ENST00000457373 KLRG2A4D1S0 409 aaPredicted RBP12.85□□□□□ -0.35
RFX3-210ENST00000457373 F6X3S4 739 aa12.85□□□□□ -0.35
RFX3-210ENST00000457373 NPR1P16066 1061 aa12.85□□□□□ -0.35
RFX3-210ENST00000457373 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
RFX3-210ENST00000457373 SLC10A5Q5PT55 438 aa12.85□□□□□ -0.35
RFX3-210ENST00000457373 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
RFX3-210ENST00000457373 STYK1Q6J9G0 422 aa12.85□□□□□ -0.35
RFX3-210ENST00000457373 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
RFX3-210ENST00000457373 CNKSR1Q969H4 720 aa12.85□□□□□ -0.35
RFX3-210ENST00000457373 CWC25Q9NXE8 425 aaPredicted RBP12.85□□□□□ -0.35
RFX3-210ENST00000457373 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
RFX3-210ENST00000457373 LAMB2P55268 1798 aa12.84□□□□□ -0.35
RFX3-210ENST00000457373 SLX4Q8IY92 1834 aa12.84□□□□□ -0.35
RFX3-210ENST00000457373 IGKV5-2P06315 115 aa12.84□□□□□ -0.35
RFX3-210ENST00000457373 CWF19L2Q2TBE0 894 aaKnown RBP12.84□□□□□ -0.35
RFX3-210ENST00000457373 C3orf67Q6ZVT6 689 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms