RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 NLGN1Q8N2Q7 840 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 NPDC1Q9NQX5 325 aaPredicted RBP3.07□□□□□ -1.92
NEDD1-204ENST00000457368 CCDC87Q9NVE4 849 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 ARFGEF1Q9Y6D6 1849 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 RGPD5Q99666 1765 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 DOT1LQ8TEK3 1739 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 MEGF6O75095 1541 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 NCAPD2Q15021 1401 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 SMG6Q86US8 1419 aaKnown RBP3.07□□□□□ -1.92
NEDD1-204ENST00000457368 ZBTB7CA1YPR0 619 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 GLTPD2A6NH11 291 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 KCNQ4P56696 695 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 TMEM132AQ24JP5 1023 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 RC3H1Q5TC82 1133 aaKnown RBP3.07□□□□□ -1.92
NEDD1-204ENST00000457368 ARHGAP27Q6ZUM4 889 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 NYAP1Q6ZVC0 841 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 AMIGO3Q86WK7 504 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 AK7Q96M32 723 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 UBR3Q6ZT12 1888 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 KAT6BQ8WYB5 2073 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 DPEP1P16444 411 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 ZNF697Q5TEC3 545 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 RRAGCQ9HB90 399 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 BCS1LQ9Y276 419 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 BRCA1P38398 1863 aaKnown RBP3.06□□□□□ -1.92
NEDD1-204ENST00000457368 TAF1LQ8IZX4 1826 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 MON2Q7Z3U7 1717 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 ZNF831Q5JPB2 1677 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 EDC4Q6P2E9 1401 aaKnown RBP3.06□□□□□ -1.92
NEDD1-204ENST00000457368 KIF24Q5T7B8 1368 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 KTN1Q86UP2 1357 aaKnown RBP3.06□□□□□ -1.92
NEDD1-204ENST00000457368 MAP2P11137 1827 aaKnown RBP3.06□□□□□ -1.92
NEDD1-204ENST00000457368 PASKQ96RG2 1323 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 FCHSD2O94868 740 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 MMP10P09238 476 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 HSPA8P11142 646 aaKnown RBP3.06□□□□□ -1.92
NEDD1-204ENST00000457368 FUT2Q10981 343 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 CCDC24Q8N4L8 307 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 DDX54Q8TDD1 881 aaKnown RBP3.06□□□□□ -1.92
NEDD1-204ENST00000457368 PRDM9Q9NQV7 894 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 PIM2Q9P1W9 311 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 KDRP35968 1356 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 DALRD3Q5D0E6 543 aaKnown RBP3.06□□□□□ -1.92
NEDD1-204ENST00000457368 RNF181Q9P0P0 153 aa3.06□□□□□ -1.92
NEDD1-204ENST00000457368 FCF1Q9Y324 198 aaKnown RBP3.06□□□□□ -1.92
NEDD1-204ENST00000457368 C4AP0C0L4 1744 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 THSD7BQ9C0I4 1608 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 PCDH11XQ9BZA7 1347 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 PCDH11YQ9BZA8 1340 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 CNTNAP4Q9C0A0 1308 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 A0A0G2JLW4 131 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 SLC10A3P09131 477 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 LMNB1P20700 586 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 DNAJB2P25686 324 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 NBPF1Q3BBV0 1214 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 LINC00116Q8NCU8 138 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 HLA-CQ95604 372 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 AIDAQ96BJ3 306 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 LTBP3Q9NS15 1303 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 LOC102724428A0A0B4J2F2 783 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 RASSF10A6NK89 507 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 SIK1P57059 783 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 TMF1P82094 1093 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 KMT5BQ4FZB7 885 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 PLA2G2CQ5R387 149 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 ZNF775Q96BV0 537 aaPredicted RBP3.05□□□□□ -1.92
NEDD1-204ENST00000457368 SYTL4Q96C24 671 aaPredicted RBP3.05□□□□□ -1.92
NEDD1-204ENST00000457368 INSRP06213 1382 aa3.05□□□□□ -1.92
NEDD1-204ENST00000457368 RPS6KA4O75676 772 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 GYS1P13807 737 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 HOXC9P31274 260 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 PTGDRQ13258 359 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 SCUBE3Q8IX30 993 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 CYP27B1O15528 508 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 MAP2K1Q02750 393 aaPredicted RBP3.04□□□□□ -1.92
NEDD1-204ENST00000457368 ITPK1Q13572 414 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 TPRNQ4KMQ1 711 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 NME9Q86XW9 330 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 PIGBQ92521 554 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 DACH1Q9UI36 760 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 TONSLQ96HA7 1378 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 TATP17735 454 aaPredicted RBP3.04□□□□□ -1.92
NEDD1-204ENST00000457368 VEGFBP49765 207 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 LBX1P52954 281 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 TRAPPC3LQ5T215 181 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 LIAT1Q6ZQX7 453 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 LDHDQ86WU2 507 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 SPSB2Q99619 263 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 SLC6A16Q9GZN6 736 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 PARP3Q9Y6F1 533 aa3.04□□□□□ -1.92
NEDD1-204ENST00000457368 VIRMAQ69YN4 1812 aaKnown RBP3.04□□□□□ -1.92
NEDD1-204ENST00000457368 LTN1O94822 1766 aa3.03□□□□□ -1.92
NEDD1-204ENST00000457368 TTC24A2A3L6 582 aaPredicted RBP3.03□□□□□ -1.92
NEDD1-204ENST00000457368 GNPATO15228 680 aa3.03□□□□□ -1.92
NEDD1-204ENST00000457368 CA12O43570 354 aa3.03□□□□□ -1.92
NEDD1-204ENST00000457368 TM4SF1P30408 202 aa3.03□□□□□ -1.92
NEDD1-204ENST00000457368 PRPF38BQ5VTL8 546 aaKnown RBP3.03□□□□□ -1.92
NEDD1-204ENST00000457368 NBPF6Q5VWK0 638 aa3.03□□□□□ -1.92
NEDD1-204ENST00000457368 RAPGEF4Q8WZA2 1011 aa3.03□□□□□ -1.92
NEDD1-204ENST00000457368 NBPF4Q96M43 638 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms