RNA–Protein interactions for RNA: ENST00000457232.5

HNF4A-206, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-206ENST00000457232 LMOD3Q0VAK6 560 aa16.74■□□□□ 0.27
HNF4A-206ENST00000457232 SLC51AQ86UW1 340 aa16.74■□□□□ 0.27
HNF4A-206ENST00000457232 L3MBTL3Q96JM7 780 aaPredicted RBP16.74■□□□□ 0.27
HNF4A-206ENST00000457232 ZNF541Q9H0D2 1346 aa16.74■□□□□ 0.27
HNF4A-206ENST00000457232 PCNTO95613 3336 aa16.74■□□□□ 0.27
HNF4A-206ENST00000457232 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
HNF4A-206ENST00000457232 C3orf67Q6ZVT6 689 aa16.73■□□□□ 0.27
HNF4A-206ENST00000457232 RTKN2Q8IZC4 609 aa16.73■□□□□ 0.27
HNF4A-206ENST00000457232 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
HNF4A-206ENST00000457232 KRT24Q2M2I5 525 aa16.72■□□□□ 0.27
HNF4A-206ENST00000457232 LTBP1Q14766 1721 aa16.72■□□□□ 0.27
HNF4A-206ENST00000457232 DDX60Q8IY21 1712 aaKnown RBP16.72■□□□□ 0.27
HNF4A-206ENST00000457232 TAF1P21675 1872 aa16.72■□□□□ 0.27
HNF4A-206ENST00000457232 CHL1O00533 1208 aa16.71■□□□□ 0.27
HNF4A-206ENST00000457232 IARSP41252 1262 aaKnown RBP16.71■□□□□ 0.27
HNF4A-206ENST00000457232 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
HNF4A-206ENST00000457232 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
HNF4A-206ENST00000457232 RUNDC1Q96C34 613 aa16.71■□□□□ 0.27
HNF4A-206ENST00000457232 PSMD1Q99460 953 aa16.71■□□□□ 0.27
HNF4A-206ENST00000457232 PARP10Q53GL7 1025 aa16.7■□□□□ 0.26
HNF4A-206ENST00000457232 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
HNF4A-206ENST00000457232 ADAMTS8Q9UP79 889 aa16.7■□□□□ 0.26
HNF4A-206ENST00000457232 FZD9O00144 591 aa16.7■□□□□ 0.26
HNF4A-206ENST00000457232 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
HNF4A-206ENST00000457232 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
HNF4A-206ENST00000457232 CRAMP1Q96RY5 1269 aa16.7■□□□□ 0.26
HNF4A-206ENST00000457232 TAF1DQ9H5J8 278 aaPredicted RBP16.7■□□□□ 0.26
HNF4A-206ENST00000457232 IQCA1LA6NCM1 817 aa16.69■□□□□ 0.26
HNF4A-206ENST00000457232 LRRC37AA6NMS7 1700 aa16.69■□□□□ 0.26
HNF4A-206ENST00000457232 CC2D2BQ6DHV5 1058 aa16.69■□□□□ 0.26
HNF4A-206ENST00000457232 COPS6Q7L5N1 327 aa16.69■□□□□ 0.26
HNF4A-206ENST00000457232 PPP1R42Q7Z4L9 355 aa16.69■□□□□ 0.26
HNF4A-206ENST00000457232 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
HNF4A-206ENST00000457232 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
HNF4A-206ENST00000457232 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.263e-15■■□□□ 11.4
HNF4A-206ENST00000457232 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
HNF4A-206ENST00000457232 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
HNF4A-206ENST00000457232 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
HNF4A-206ENST00000457232 PASKQ96RG2 1323 aa16.67■□□□□ 0.26
HNF4A-206ENST00000457232 PPEF1O14829 653 aaPredicted RBP16.67■□□□□ 0.26
HNF4A-206ENST00000457232 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
HNF4A-206ENST00000457232 RBM17Q96I25 401 aaKnown RBP16.67■□□□□ 0.26
HNF4A-206ENST00000457232 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
HNF4A-206ENST00000457232 ABCC4O15439 1325 aa16.66■□□□□ 0.26
HNF4A-206ENST00000457232 AIMP1Q12904 312 aaKnown RBP16.66■□□□□ 0.26
HNF4A-206ENST00000457232 LDHDQ86WU2 507 aa16.66■□□□□ 0.26
HNF4A-206ENST00000457232 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
HNF4A-206ENST00000457232 CHPF2Q9P2E5 772 aa16.66■□□□□ 0.26
HNF4A-206ENST00000457232 COL4A1P02462 1669 aa16.65■□□□□ 0.26
HNF4A-206ENST00000457232 TCIRG1Q13488 830 aa16.65■□□□□ 0.26
HNF4A-206ENST00000457232 HSP90AB3PQ58FF7 597 aa16.65■□□□□ 0.26
HNF4A-206ENST00000457232 GPC2Q8N158 579 aa16.65■□□□□ 0.26
HNF4A-206ENST00000457232 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
HNF4A-206ENST00000457232 HACL1Q9UJ83 578 aa16.65■□□□□ 0.26
HNF4A-206ENST00000457232 LAS1LQ9Y4W2 734 aaKnown RBP16.65■□□□□ 0.26
HNF4A-206ENST00000457232 DUOX1Q9NRD9 1551 aa16.65■□□□□ 0.26
HNF4A-206ENST00000457232 TCERG1O14776 1098 aaKnown RBP16.64■□□□□ 0.25
HNF4A-206ENST00000457232 ITGBL1O95965 494 aaPredicted RBP16.64■□□□□ 0.25
HNF4A-206ENST00000457232 HOXB7P09629 217 aa16.64■□□□□ 0.25
HNF4A-206ENST00000457232 EPHX2P34913 555 aa16.64■□□□□ 0.25
HNF4A-206ENST00000457232 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
HNF4A-206ENST00000457232 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
HNF4A-206ENST00000457232 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
HNF4A-206ENST00000457232 CFAP44Q96MT7 982 aa16.63■□□□□ 0.25
HNF4A-206ENST00000457232 ATP6V0A2Q9Y487 856 aa16.63■□□□□ 0.25
HNF4A-206ENST00000457232 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
HNF4A-206ENST00000457232 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
HNF4A-206ENST00000457232 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
HNF4A-206ENST00000457232 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
HNF4A-206ENST00000457232 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
HNF4A-206ENST00000457232 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
HNF4A-206ENST00000457232 SCNN1DP51172 638 aa16.61■□□□□ 0.25
HNF4A-206ENST00000457232 COL13A1Q5TAT6 717 aaPredicted RBP16.61■□□□□ 0.25
HNF4A-206ENST00000457232 PLBD2Q8NHP8 589 aa16.61■□□□□ 0.25
HNF4A-206ENST00000457232 ISCA1Q9BUE6 129 aa16.61■□□□□ 0.25
HNF4A-206ENST00000457232 DBF4Q9UBU7 674 aaPredicted RBP16.61■□□□□ 0.25
HNF4A-206ENST00000457232 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
HNF4A-206ENST00000457232 HSPA1AP0DMV8 641 aaKnown RBP16.6■□□□□ 0.25
HNF4A-206ENST00000457232 HSPA1BP0DMV9 641 aaKnown RBP16.6■□□□□ 0.25
HNF4A-206ENST00000457232 EIF6P56537 245 aaKnown RBP16.6■□□□□ 0.25
HNF4A-206ENST00000457232 DUSP27Q5VZP5 1158 aa16.6■□□□□ 0.25
HNF4A-206ENST00000457232 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
HNF4A-206ENST00000457232 RTFDC1Q9BY42 306 aaPredicted RBP16.6■□□□□ 0.25
HNF4A-206ENST00000457232 MKRN1Q9UHC7 482 aaKnown RBP16.6■□□□□ 0.25
HNF4A-206ENST00000457232 GJA3Q9Y6H8 435 aa16.6■□□□□ 0.25
HNF4A-206ENST00000457232 CNTNAP1P78357 1384 aa16.6■□□□□ 0.25
HNF4A-206ENST00000457232 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
HNF4A-206ENST00000457232 APAF1O14727 1248 aa16.59■□□□□ 0.25
HNF4A-206ENST00000457232 AOC3Q16853 763 aa16.59■□□□□ 0.25
HNF4A-206ENST00000457232 MAP1SQ66K74 1059 aaPredicted RBP16.59■□□□□ 0.25
HNF4A-206ENST00000457232 ANKRD13DQ6ZTN6 518 aa16.59■□□□□ 0.25
HNF4A-206ENST00000457232 PNMA8AQ86V59 439 aaPredicted RBP16.59■□□□□ 0.25
HNF4A-206ENST00000457232 PPIP5K2O43314 1243 aa16.58■□□□□ 0.24
HNF4A-206ENST00000457232 SP8Q8IXZ3 490 aa16.58■□□□□ 0.24
HNF4A-206ENST00000457232 NIM1KQ8IY84 436 aa16.58■□□□□ 0.24
HNF4A-206ENST00000457232 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
HNF4A-206ENST00000457232 BBOX1O75936 387 aa16.57■□□□□ 0.24
HNF4A-206ENST00000457232 EPS15P42566 896 aa16.57■□□□□ 0.24
HNF4A-206ENST00000457232 GRAPQ13588 217 aa16.57■□□□□ 0.24
HNF4A-206ENST00000457232 GRAPLQ8TC17 118 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms