RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 NEXNQ0ZGT2 675 aa16.27■□□□□ 0.2
TOP3B-213ENST00000457179 ZDHHC9Q9Y397 364 aa16.27■□□□□ 0.2
TOP3B-213ENST00000457179 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.19
TOP3B-213ENST00000457179 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.19
TOP3B-213ENST00000457179 MEGF6O75095 1541 aa16.27■□□□□ 0.19
TOP3B-213ENST00000457179 ST18O60284 1047 aa16.26■□□□□ 0.19
TOP3B-213ENST00000457179 UBE3BQ7Z3V4 1068 aa16.26■□□□□ 0.19
TOP3B-213ENST00000457179 DCAF5Q96JK2 942 aa16.26■□□□□ 0.19
TOP3B-213ENST00000457179 CCDC8Q9H0W5 538 aaPredicted RBP16.26■□□□□ 0.19
TOP3B-213ENST00000457179 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
TOP3B-213ENST00000457179 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
TOP3B-213ENST00000457179 ADCY9O60503 1353 aa16.25■□□□□ 0.19
TOP3B-213ENST00000457179 ANKRD13DQ6ZTN6 518 aa16.25■□□□□ 0.19
TOP3B-213ENST00000457179 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
TOP3B-213ENST00000457179 GDPD2Q9HCC8 539 aa16.25■□□□□ 0.19
TOP3B-213ENST00000457179 DDX21Q9NR30 783 aaKnown RBP eCLIP16.25■□□□□ 0.19
TOP3B-213ENST00000457179 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
TOP3B-213ENST00000457179 TNS3Q68CZ2 1445 aa16.25■□□□□ 0.19
TOP3B-213ENST00000457179 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
TOP3B-213ENST00000457179 SNRPA1P09661 255 aaKnown RBP16.24■□□□□ 0.19
TOP3B-213ENST00000457179 SUCLG2Q96I99 432 aa16.24■□□□□ 0.19
TOP3B-213ENST00000457179 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
TOP3B-213ENST00000457179 ZNF142P52746 1687 aaPredicted RBP16.24■□□□□ 0.19
TOP3B-213ENST00000457179 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
TOP3B-213ENST00000457179 IL2RBP14784 551 aa16.23■□□□□ 0.19
TOP3B-213ENST00000457179 GTF2F1P35269 517 aaKnown RBP eCLIP16.23■□□□□ 0.19
TOP3B-213ENST00000457179 BABAM1Q9NWV8 329 aa16.23■□□□□ 0.19
TOP3B-213ENST00000457179 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
TOP3B-213ENST00000457179 GRM8O00222 908 aa16.23■□□□□ 0.19
TOP3B-213ENST00000457179 CHAF1AQ13111 956 aaPredicted RBP16.23■□□□□ 0.19
TOP3B-213ENST00000457179 IL25Q9H293 177 aa16.23■□□□□ 0.19
TOP3B-213ENST00000457179 ADCY5O95622 1261 aa16.22■□□□□ 0.19
TOP3B-213ENST00000457179 MBD3O95983 291 aa16.22■□□□□ 0.19
TOP3B-213ENST00000457179 PDIA6Q15084 440 aa16.22■□□□□ 0.19
TOP3B-213ENST00000457179 CWC27Q6UX04 472 aaKnown RBP16.22■□□□□ 0.19
TOP3B-213ENST00000457179 TTLL7Q6ZT98 887 aa16.22■□□□□ 0.19
TOP3B-213ENST00000457179 ESYT1Q9BSJ8 1104 aa16.22■□□□□ 0.19
TOP3B-213ENST00000457179 A0A087WZG4 1122 aa16.22■□□□□ 0.19
TOP3B-213ENST00000457179 IGKV5-2P06315 115 aa16.22■□□□□ 0.19
TOP3B-213ENST00000457179 AACSQ86V21 672 aa16.22■□□□□ 0.19
TOP3B-213ENST00000457179 CWC22Q9HCG8 908 aaKnown RBP16.22■□□□□ 0.19
TOP3B-213ENST00000457179 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
TOP3B-213ENST00000457179 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
TOP3B-213ENST00000457179 IPO4Q8TEX9 1081 aaKnown RBP16.21■□□□□ 0.19
TOP3B-213ENST00000457179 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.21■□□□□ 0.19
TOP3B-213ENST00000457179 KCNJ4P48050 445 aa16.21■□□□□ 0.19
TOP3B-213ENST00000457179 CLASRPQ8N2M8 674 aaKnown RBP16.21■□□□□ 0.19
TOP3B-213ENST00000457179 ASAP1Q9ULH1 1129 aa16.21■□□□□ 0.19
TOP3B-213ENST00000457179 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.19
TOP3B-213ENST00000457179 KDM6AO15550 1401 aaPredicted RBP16.2■□□□□ 0.18
TOP3B-213ENST00000457179 EPHA10Q5JZY3 1008 aa16.2■□□□□ 0.18
TOP3B-213ENST00000457179 LINS1Q8NG48 757 aa16.2■□□□□ 0.18
TOP3B-213ENST00000457179 SSH3Q8TE77 659 aa16.2■□□□□ 0.18
TOP3B-213ENST00000457179 MARF1Q9Y4F3 1742 aaKnown RBP16.2■□□□□ 0.18
TOP3B-213ENST00000457179 CHMLP26374 656 aa16.2■□□□□ 0.18
TOP3B-213ENST00000457179 G3BP1Q13283 466 aaKnown RBP eCLIP16.2■□□□□ 0.18
TOP3B-213ENST00000457179 HOXB7P09629 217 aa16.2■□□□□ 0.18
TOP3B-213ENST00000457179 ACSBG1Q96GR2 724 aa16.19■□□□□ 0.18
TOP3B-213ENST00000457179 CHMP4AQ9BY43 222 aa16.19■□□□□ 0.18
TOP3B-213ENST00000457179 KIF1BPQ96EK5 621 aa16.19■□□□□ 0.18
TOP3B-213ENST00000457179 TMX3Q96JJ7 454 aa16.19■□□□□ 0.18
TOP3B-213ENST00000457179 BOLA2Q9H3K6 86 aa16.19■□□□□ 0.18
TOP3B-213ENST00000457179 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
TOP3B-213ENST00000457179 RGPD5Q99666 1765 aa16.18■□□□□ 0.18
TOP3B-213ENST00000457179 GADD45BO75293 160 aaPredicted RBP16.18■□□□□ 0.18
TOP3B-213ENST00000457179 TAF3Q5VWG9 929 aa16.18■□□□□ 0.18
TOP3B-213ENST00000457179 SPC24Q8NBT2 197 aa16.18■□□□□ 0.18
TOP3B-213ENST00000457179 SYAP1Q96A49 352 aaPredicted RBP16.18■□□□□ 0.18
TOP3B-213ENST00000457179 HCLS1P14317 486 aaPredicted RBP16.18■□□□□ 0.18
TOP3B-213ENST00000457179 OSBPL3Q9H4L5 887 aa16.18■□□□□ 0.18
TOP3B-213ENST00000457179 GPTP24298 496 aa16.17■□□□□ 0.18
TOP3B-213ENST00000457179 EDC3Q96F86 508 aaKnown RBP16.17■□□□□ 0.18
TOP3B-213ENST00000457179 DIAPH3Q9NSV4 1193 aa16.17■□□□□ 0.18
TOP3B-213ENST00000457179 TLR7Q9NYK1 1049 aaKnown RBP16.17■□□□□ 0.18
TOP3B-213ENST00000457179 NEURL1BA8MQ27 555 aa16.17■□□□□ 0.18
TOP3B-213ENST00000457179 MCCP23508 829 aa16.17■□□□□ 0.18
TOP3B-213ENST00000457179 STRCP1A6NGW2 1772 aa16.17■□□□□ 0.18
TOP3B-213ENST00000457179 SOS2Q07890 1332 aaPredicted RBP16.16■□□□□ 0.18
TOP3B-213ENST00000457179 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
TOP3B-213ENST00000457179 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
TOP3B-213ENST00000457179 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
TOP3B-213ENST00000457179 NBPF15Q8N660 670 aa16.16■□□□□ 0.18
TOP3B-213ENST00000457179 KAZALD1Q96I82 304 aa16.16■□□□□ 0.18
TOP3B-213ENST00000457179 SALL3Q9BXA9 1300 aa16.16■□□□□ 0.18
TOP3B-213ENST00000457179 GCKRQ14397 625 aa16.16■□□□□ 0.18
TOP3B-213ENST00000457179 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
TOP3B-213ENST00000457179 PYCARDQ9ULZ3 195 aa16.16■□□□□ 0.18
TOP3B-213ENST00000457179 ERICH4A6NGS2 130 aa16.15■□□□□ 0.18
TOP3B-213ENST00000457179 LMTK3Q96Q04 1460 aa16.15■□□□□ 0.18
TOP3B-213ENST00000457179 PCDH11XQ9BZA7 1347 aa16.15■□□□□ 0.18
TOP3B-213ENST00000457179 PCDH11YQ9BZA8 1340 aa16.15■□□□□ 0.18
TOP3B-213ENST00000457179 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
TOP3B-213ENST00000457179 CPA1P15085 419 aa16.15■□□□□ 0.18
TOP3B-213ENST00000457179 IRX5P78411 483 aaPredicted RBP16.15■□□□□ 0.18
TOP3B-213ENST00000457179 LMBR1LQ6UX01 489 aa16.15■□□□□ 0.18
TOP3B-213ENST00000457179 DNAJC10Q8IXB1 793 aa16.15■□□□□ 0.18
TOP3B-213ENST00000457179 PHF14O94880 888 aa16.14■□□□□ 0.17
TOP3B-213ENST00000457179 SPTLC3Q9NUV7 552 aa16.14■□□□□ 0.17
TOP3B-213ENST00000457179 KCNQ4P56696 695 aa16.13■□□□□ 0.17
TOP3B-213ENST00000457179 NAA30Q147X3 362 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms