RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 RGPD3A6NKT7 1758 aaPredicted RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 RGPD4Q7Z3J3 1758 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SOS1Q07889 1333 aaPredicted RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 LAMA3Q16787 3333 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 WTIPA6NIX2 430 aaPredicted RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 F6X3S4 739 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 EIF5P55010 431 aaKnown RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 AIMP1Q12904 312 aaKnown RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 NFIXQ14938 502 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 TAF7Q15545 349 aaPredicted RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 G2E3Q7L622 706 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 NUTM1Q86Y26 1132 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 DCBLD2Q96PD2 775 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 MTFR1LQ9H019 292 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ZBTB3Q9H5J0 574 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SPON1Q9HCB6 807 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 TSPYL4Q9UJ04 414 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 TAF1P21675 1872 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 UBN2Q6ZU65 1347 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CHL1O00533 1208 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 KCNA3P22001 575 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 GPTP24298 496 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 DEKP35659 375 aaKnown RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CCDC87Q9NVE4 849 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CHPF2Q9P2E5 772 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 DDX19BQ9UMR2 479 aa3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 RTCBQ9Y3I0 505 aaKnown RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 N4BP2Q86UW6 1770 aaPredicted RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 LAMA2P24043 3122 aaKnown RBP3.83□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 USP42Q9H9J4 1324 aaKnown RBP3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 LRP5O75197 1615 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 RPS6KA4O75676 772 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CAMTA2O94983 1202 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ZNF853P0CG23 659 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 TRAPPC3LQ5T215 181 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 TTC5Q8N0Z6 440 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 COL15A1P39059 1388 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 KDM3BQ7LBC6 1761 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CICQ96RK0 1608 aaPredicted RBP3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 POLRMTO00411 1230 aaKnown RBP3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 HSP90AB1P08238 724 aaKnown RBP3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 C16orf71Q8IYS4 520 aaPredicted RBP3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 MRPL50Q8N5N7 158 aaKnown RBP3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CFAP44Q96MT7 982 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CNTNAP4Q9C0A0 1308 aa3.82□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ATP5J2-PTCD1G3V325 749 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SMARCA5O60264 1052 aaPredicted RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 TM4SF1P30408 202 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 RFC4P35249 363 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 REM2Q8IYK8 340 aaPredicted RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SMARCC1Q92922 1105 aaPredicted RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 FMNL2Q96PY5 1086 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 UPF2Q9HAU5 1272 aaKnown RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 KIF16BQ96L93 1317 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ABCC12Q96J65 1359 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 DPEP1P16444 411 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SSFA2P28290 1259 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 DDRGK1Q96HY6 314 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CCDC85AQ96PX6 553 aaPredicted RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ZBTB40Q9NUA8 1239 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 IFT57Q9NWB7 429 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 AFDNP55196 1824 aaKnown RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SNRPA1P09661 255 aaKnown RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CALD1Q05682 793 aaKnown RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 LMOD3Q0VAK6 560 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 MKRN4PQ13434 485 aaPredicted RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 COPS6Q7L5N1 327 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 DZIP3Q86Y13 1208 aaKnown RBP3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 XAGE3Q8WTP9 111 aa3.81□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 KIAA1551Q9HCM1 1747 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ZBTB7BO15156 539 aaPredicted RBP3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 FRAT2O75474 233 aaPredicted RBP3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 VASPP50552 380 aaPredicted RBP3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 FKBP5Q13451 457 aaPredicted RBP3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SUSD4Q5VX71 490 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 TSHZ3Q63HK5 1081 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 OTUD7AQ8TE49 926 aaPredicted RBP3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 MEIS3Q99687 375 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 PXDNLA1KZ92 1463 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 TNRC6CQ9HCJ0 1690 aaKnown RBP3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SERPINB2P05120 415 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ALDH1L2Q3SY69 923 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 RC3H1Q5TC82 1133 aaKnown RBP3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 PRR5LQ6MZQ0 368 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 SIRT2Q8IXJ6 389 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ANKRD31Q8N7Z5 1873 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ZNF526Q8TF50 670 aaPredicted RBP3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 NARFQ9UHQ1 456 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 IL16Q14005 1332 aa3.8□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CT47B1P0C2W7 299 aaPredicted RBP3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 HCLS1P14317 486 aaPredicted RBP3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 RASSF7Q02833 373 aa3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 NFKBIBQ15653 356 aa3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CWF19L2Q2TBE0 894 aaKnown RBP3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 ERFEQ4G0M1 354 aa3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 CHD1LQ86WJ1 897 aa3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 STK31Q9BXU1 1019 aa3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 COL11A2P13942 1736 aaPredicted RBP3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 COL24A1Q17RW2 1714 aa3.79□□□□□ -1.8
VSTM2A-OT1-201ENST00000456049 RANBP2P49792 3224 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms