RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 PRIMPOLQ96LW4 560 aa21.11■□□□□ 0.97
PTPN6-204ENST00000456013 PSMA5P28066 241 aa21.11■□□□□ 0.97
PTPN6-204ENST00000456013 PROSER3Q2NL68 480 aa21.11■□□□□ 0.97
PTPN6-204ENST00000456013 CWF19L2Q2TBE0 894 aaKnown RBP21.11■□□□□ 0.97
PTPN6-204ENST00000456013 TPCN1Q9ULQ1 816 aa21.11■□□□□ 0.97
PTPN6-204ENST00000456013 UTYO14607 1347 aa21.11■□□□□ 0.97
PTPN6-204ENST00000456013 SASH1O94885 1247 aa21.1■□□□□ 0.97
PTPN6-204ENST00000456013 NECAB1Q8N987 351 aa21.1■□□□□ 0.97
PTPN6-204ENST00000456013 SPTLC3Q9NUV7 552 aa21.1■□□□□ 0.97
PTPN6-204ENST00000456013 SIPA1L3O60292 1781 aaPredicted RBP21.1■□□□□ 0.97
PTPN6-204ENST00000456013 NMIQ13287 307 aaPredicted RBP21.1■□□□□ 0.97
PTPN6-204ENST00000456013 LINS1Q8NG48 757 aa21.1■□□□□ 0.97
PTPN6-204ENST00000456013 LRRC59Q96AG4 307 aaKnown RBP21.1■□□□□ 0.97
PTPN6-204ENST00000456013 FAM227BQ96M60 508 aa21.1■□□□□ 0.97
PTPN6-204ENST00000456013 KCNJ4P48050 445 aa21.09■□□□□ 0.97
PTPN6-204ENST00000456013 LARP1BQ659C4 914 aaKnown RBP21.09■□□□□ 0.97
PTPN6-204ENST00000456013 PXDNQ92626 1479 aa21.09■□□□□ 0.97
PTPN6-204ENST00000456013 GRM8O00222 908 aa21.09■□□□□ 0.97
PTPN6-204ENST00000456013 SLC27A2O14975 620 aa21.09■□□□□ 0.97
PTPN6-204ENST00000456013 G3BP1Q13283 466 aaKnown RBP eCLIP21.09■□□□□ 0.97
PTPN6-204ENST00000456013 C1orf141Q5JVX7 400 aa21.09■□□□□ 0.97
PTPN6-204ENST00000456013 EAF2Q96CJ1 260 aaPredicted RBP21.09■□□□□ 0.97
PTPN6-204ENST00000456013 KAZALD1Q96I82 304 aa21.09■□□□□ 0.97
PTPN6-204ENST00000456013 SUCLG2Q96I99 432 aa21.09■□□□□ 0.97
PTPN6-204ENST00000456013 DTNBO60941 627 aa21.08■□□□□ 0.97
PTPN6-204ENST00000456013 ELP1O95163 1332 aa21.08■□□□□ 0.97
PTPN6-204ENST00000456013 CCDC192P0DO97 292 aa21.08■□□□□ 0.97
PTPN6-204ENST00000456013 KRT85P78386 507 aa21.08■□□□□ 0.97
PTPN6-204ENST00000456013 HMGN5P82970 282 aaKnown RBP21.08■□□□□ 0.97
PTPN6-204ENST00000456013 DDX54Q8TDD1 881 aaKnown RBP21.08■□□□□ 0.97
PTPN6-204ENST00000456013 ALDH8A1Q9H2A2 487 aaPredicted RBP21.08■□□□□ 0.97
PTPN6-204ENST00000456013 AP5Z1O43299 807 aa21.07■□□□□ 0.96
PTPN6-204ENST00000456013 TPM3P06753 285 aa21.07■□□□□ 0.96
PTPN6-204ENST00000456013 PDCP20941 246 aa21.07■□□□□ 0.96
PTPN6-204ENST00000456013 ANKRD1Q15327 319 aa21.07■□□□□ 0.96
PTPN6-204ENST00000456013 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
PTPN6-204ENST00000456013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.07■□□□□ 0.96
PTPN6-204ENST00000456013 RNF20Q5VTR2 975 aa21.07■□□□□ 0.96
PTPN6-204ENST00000456013 BICC1Q9H694 974 aaKnown RBP21.07■□□□□ 0.96
PTPN6-204ENST00000456013 NPHP4O75161 1426 aaPredicted RBP21.06■□□□□ 0.96
PTPN6-204ENST00000456013 ZBTB7CA1YPR0 619 aa21.06■□□□□ 0.96
PTPN6-204ENST00000456013 CCDC8Q9H0W5 538 aaPredicted RBP21.06■□□□□ 0.96
PTPN6-204ENST00000456013 DDX58O95786 925 aaKnown RBP21.05■□□□□ 0.96
PTPN6-204ENST00000456013 GTF2F1P35269 517 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTPN6-204ENST00000456013 BLOC1S2Q6QNY1 142 aa21.05■□□□□ 0.96
PTPN6-204ENST00000456013 CDC37L1Q7L3B6 337 aa21.05■□□□□ 0.96
PTPN6-204ENST00000456013 MED23Q9ULK4 1368 aa21.05■□□□□ 0.96
PTPN6-204ENST00000456013 A0A0D9SFI3 127 aa21.05■□□□□ 0.96
PTPN6-204ENST00000456013 PLCB2Q00722 1185 aa21.05■□□□□ 0.96
PTPN6-204ENST00000456013 JCADQ9P266 1359 aa21.05■□□□□ 0.96
PTPN6-204ENST00000456013 PRAMEF22A3QJZ6 481 aa21.04■□□□□ 0.96
PTPN6-204ENST00000456013 PSME1Q06323 249 aa21.04■□□□□ 0.96
PTPN6-204ENST00000456013 DDX21Q9NR30 783 aaKnown RBP eCLIP21.04■□□□□ 0.96
PTPN6-204ENST00000456013 RPS6KB1P23443 525 aa21.04■□□□□ 0.96
PTPN6-204ENST00000456013 C17orf53Q8N3J3 647 aaPredicted RBP21.04■□□□□ 0.96
PTPN6-204ENST00000456013 FSD1Q9BTV5 496 aa21.04■□□□□ 0.96
PTPN6-204ENST00000456013 CAMTA1Q9Y6Y1 1673 aa21.04■□□□□ 0.96
PTPN6-204ENST00000456013 MRC1P22897 1456 aa21.04■□□□□ 0.96
PTPN6-204ENST00000456013 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
PTPN6-204ENST00000456013 MAP3K11Q16584 847 aa21.03■□□□□ 0.96
PTPN6-204ENST00000456013 TSGA10IPQ3SY00 556 aa21.03■□□□□ 0.96
PTPN6-204ENST00000456013 NUP62CLQ9H1M0 184 aa21.03■□□□□ 0.96
PTPN6-204ENST00000456013 TLR7Q9NYK1 1049 aaKnown RBP21.03■□□□□ 0.96
PTPN6-204ENST00000456013 ADAMTS7Q9UKP4 1686 aa21.03■□□□□ 0.96
PTPN6-204ENST00000456013 KIAA1524Q8TCG1 905 aa21.03■□□□□ 0.96
PTPN6-204ENST00000456013 FAM200AQ8TCP9 573 aa21.03■□□□□ 0.96
PTPN6-204ENST00000456013 BOLA2Q9H3K6 86 aa21.03■□□□□ 0.96
PTPN6-204ENST00000456013 HMG20BQ9P0W2 317 aa21.03■□□□□ 0.96
PTPN6-204ENST00000456013 TOB2Q14106 344 aaPredicted RBP21.02■□□□□ 0.96
PTPN6-204ENST00000456013 GOLGA6L6A8MZA4 724 aa21.02■□□□□ 0.96
PTPN6-204ENST00000456013 LIG1P18858 919 aa21.02■□□□□ 0.96
PTPN6-204ENST00000456013 FERMT3Q86UX7 667 aa21.02■□□□□ 0.96
PTPN6-204ENST00000456013 SCAND2PQ9GZW5 306 aaPredicted RBP21.02■□□□□ 0.96
PTPN6-204ENST00000456013 KCNF1Q9H3M0 494 aa21.02■□□□□ 0.96
PTPN6-204ENST00000456013 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.95
PTPN6-204ENST00000456013 PDIA6Q15084 440 aa21.01■□□□□ 0.95
PTPN6-204ENST00000456013 ARHGEF25Q86VW2 580 aa21.01■□□□□ 0.95
PTPN6-204ENST00000456013 MRVI1Q9Y6F6 885 aa21.01■□□□□ 0.95
PTPN6-204ENST00000456013 IGKV5-2P06315 115 aa21■□□□□ 0.95
PTPN6-204ENST00000456013 TYRO3Q06418 890 aa21■□□□□ 0.95
PTPN6-204ENST00000456013 FAM173BQ6P4H8 233 aa21■□□□□ 0.95
PTPN6-204ENST00000456013 SLIT3O75094 1523 aa21■□□□□ 0.95
PTPN6-204ENST00000456013 AIMP1Q12904 312 aaKnown RBP21■□□□□ 0.95
PTPN6-204ENST00000456013 ESCO1Q5FWF5 840 aa21■□□□□ 0.95
PTPN6-204ENST00000456013 TCEANC2Q96MN5 208 aa21■□□□□ 0.95
PTPN6-204ENST00000456013 SIL1Q9H173 461 aa21■□□□□ 0.95
PTPN6-204ENST00000456013 TAF6LQ9Y6J9 622 aa21■□□□□ 0.95
PTPN6-204ENST00000456013 GCP02774 474 aa20.99■□□□□ 0.95
PTPN6-204ENST00000456013 NPHP3Q7Z494 1330 aa20.99■□□□□ 0.95
PTPN6-204ENST00000456013 USPL1Q5W0Q7 1092 aa20.99■□□□□ 0.95
PTPN6-204ENST00000456013 LARP1Q6PKG0 1096 aaKnown RBP20.99■□□□□ 0.95
PTPN6-204ENST00000456013 ZNF589Q86UQ0 364 aaPredicted RBP20.99■□□□□ 0.95
PTPN6-204ENST00000456013 PKNOX2Q96KN3 472 aa20.99■□□□□ 0.95
PTPN6-204ENST00000456013 SPATA32Q96LK8 384 aa20.99■□□□□ 0.95
PTPN6-204ENST00000456013 PYCARDQ9ULZ3 195 aa20.99■□□□□ 0.95
PTPN6-204ENST00000456013 RBM43Q6ZSC3 357 aaKnown RBP20.98■□□□□ 0.95
PTPN6-204ENST00000456013 ANKRD24Q8TF21 1146 aa20.98■□□□□ 0.95
PTPN6-204ENST00000456013 DDX19AQ9NUU7 478 aaKnown RBP20.98■□□□□ 0.95
PTPN6-204ENST00000456013 TAF5LO75529 589 aa20.97■□□□□ 0.95
PTPN6-204ENST00000456013 CAMK4Q16566 473 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms