RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 NECTIN2Q92692 538 aa24.23■■□□□ 1.47
UBE2D4-208ENST00000454350 ZNF277Q9NRM2 450 aaPredicted RBP24.23■■□□□ 1.47
UBE2D4-208ENST00000454350 COL4A5P29400 1685 aa24.22■■□□□ 1.47
UBE2D4-208ENST00000454350 PARP10Q53GL7 1025 aa24.22■■□□□ 1.47
UBE2D4-208ENST00000454350 COPS6Q7L5N1 327 aa24.22■■□□□ 1.47
UBE2D4-208ENST00000454350 SLC51AQ86UW1 340 aa24.22■■□□□ 1.47
UBE2D4-208ENST00000454350 RTKN2Q8IZC4 609 aa24.22■■□□□ 1.47
UBE2D4-208ENST00000454350 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
UBE2D4-208ENST00000454350 TAF1P21675 1872 aa24.21■■□□□ 1.47
UBE2D4-208ENST00000454350 SLC10A5Q5PT55 438 aa24.21■■□□□ 1.47
UBE2D4-208ENST00000454350 XAGE3Q8WTP9 111 aa24.21■■□□□ 1.47
UBE2D4-208ENST00000454350 PPP1R42Q7Z4L9 355 aa24.2■■□□□ 1.46
UBE2D4-208ENST00000454350 LAS1LQ9Y4W2 734 aaKnown RBP24.2■■□□□ 1.46
UBE2D4-208ENST00000454350 PCNTO95613 3336 aa24.19■■□□□ 1.46
UBE2D4-208ENST00000454350 DDX60Q8IY21 1712 aaKnown RBP24.19■■□□□ 1.46
UBE2D4-208ENST00000454350 ZNF853P0CG23 659 aa24.19■■□□□ 1.46
UBE2D4-208ENST00000454350 SYNE4Q8N205 404 aa24.19■■□□□ 1.46
UBE2D4-208ENST00000454350 CFAP44Q96MT7 982 aa24.19■■□□□ 1.46
UBE2D4-208ENST00000454350 CRAMP1Q96RY5 1269 aa24.19■■□□□ 1.46
UBE2D4-208ENST00000454350 CHPF2Q9P2E5 772 aa24.19■■□□□ 1.46
UBE2D4-208ENST00000454350 ZNF541Q9H0D2 1346 aa24.18■■□□□ 1.46
UBE2D4-208ENST00000454350 L3MBTL3Q96JM7 780 aaPredicted RBP24.18■■□□□ 1.46
UBE2D4-208ENST00000454350 PSMD1Q99460 953 aa24.18■■□□□ 1.46
UBE2D4-208ENST00000454350 APAF1O14727 1248 aa24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 HOXB7P09629 217 aa24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 POTEIP0CG38 1075 aa24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 POTEJP0CG39 1038 aa24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 IARSP41252 1262 aaKnown RBP24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 AIMP1Q12904 312 aaKnown RBP24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 NLRP10Q86W26 655 aa24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 RPGRQ92834 1020 aaKnown RBP24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 UTP14AQ9BVJ6 771 aaKnown RBP24.17■■□□□ 1.46
UBE2D4-208ENST00000454350 ADAMTSL1Q8N6G6 1762 aa24.16■■□□□ 1.46
UBE2D4-208ENST00000454350 FZD9O00144 591 aa24.16■■□□□ 1.46
UBE2D4-208ENST00000454350 TCIRG1Q13488 830 aa24.16■■□□□ 1.46
UBE2D4-208ENST00000454350 CC2D2BQ6DHV5 1058 aa24.16■■□□□ 1.46
UBE2D4-208ENST00000454350 KLRG1Q96E93 195 aa24.16■■□□□ 1.46
UBE2D4-208ENST00000454350 MBIPQ9NS73 344 aa24.16■■□□□ 1.46
UBE2D4-208ENST00000454350 RNF123Q5XPI4 1314 aa24.15■■□□□ 1.46
UBE2D4-208ENST00000454350 RBM17Q96I25 401 aaKnown RBP24.15■■□□□ 1.46
UBE2D4-208ENST00000454350 CCDC184Q52MB2 194 aa24.14■■□□□ 1.45
UBE2D4-208ENST00000454350 HSP90AB3PQ58FF7 597 aa24.14■■□□□ 1.45
UBE2D4-208ENST00000454350 HDGFL1Q5TGJ6 251 aa24.14■■□□□ 1.45
UBE2D4-208ENST00000454350 JMYQ8N9B5 988 aa24.14■■□□□ 1.45
UBE2D4-208ENST00000454350 DUSP27Q5VZP5 1158 aa24.13■■□□□ 1.45
UBE2D4-208ENST00000454350 NLRP3Q96P20 1036 aa24.13■■□□□ 1.45
UBE2D4-208ENST00000454350 LTBP1Q14766 1721 aa24.13■■□□□ 1.45
UBE2D4-208ENST00000454350 PPEF1O14829 653 aaPredicted RBP24.12■■□□□ 1.45
UBE2D4-208ENST00000454350 TAF1DQ9H5J8 278 aaPredicted RBP24.12■■□□□ 1.45
UBE2D4-208ENST00000454350 HCLS1P14317 486 aaPredicted RBP24.11■■□□□ 1.45
UBE2D4-208ENST00000454350 PLBD2Q8NHP8 589 aa24.11■■□□□ 1.45
UBE2D4-208ENST00000454350 DBF4Q9UBU7 674 aaPredicted RBP24.11■■□□□ 1.45
UBE2D4-208ENST00000454350 ABCC4O15439 1325 aa24.1■■□□□ 1.45
UBE2D4-208ENST00000454350 GRIPAP1Q4V328 841 aa24.1■■□□□ 1.45
UBE2D4-208ENST00000454350 CHADLQ6NUI6 762 aa24.1■■□□□ 1.45
UBE2D4-208ENST00000454350 ISCA1Q9BUE6 129 aa24.1■■□□□ 1.45
UBE2D4-208ENST00000454350 IFT57Q9NWB7 429 aa24.1■■□□□ 1.45
UBE2D4-208ENST00000454350 LRRC37AA6NMS7 1700 aa24.1■■□□□ 1.45
UBE2D4-208ENST00000454350 IQCA1LA6NCM1 817 aa24.09■■□□□ 1.45
UBE2D4-208ENST00000454350 ANKRD13DQ6ZTN6 518 aa24.09■■□□□ 1.45
UBE2D4-208ENST00000454350 ATP6V0A2Q9Y487 856 aa24.09■■□□□ 1.45
UBE2D4-208ENST00000454350 COL4A1P02462 1669 aa24.08■■□□□ 1.45
UBE2D4-208ENST00000454350 TCERG1O14776 1098 aaKnown RBP24.08■■□□□ 1.45
UBE2D4-208ENST00000454350 TRMT112Q9UI30 125 aaKnown RBP24.08■■□□□ 1.45
UBE2D4-208ENST00000454350 SH3TC1Q8TE82 1336 aa24.08■■□□□ 1.44
UBE2D4-208ENST00000454350 ZNF428Q96B54 188 aa24.07■■□□□ 1.44
UBE2D4-208ENST00000454350 HYPKQ9NX55 129 aa24.07■■□□□ 1.44
UBE2D4-208ENST00000454350 GNAI1P63096 354 aa24.06■■□□□ 1.44
UBE2D4-208ENST00000454350 LDHDQ86WU2 507 aa24.06■■□□□ 1.44
UBE2D4-208ENST00000454350 GPC2Q8N158 579 aa24.06■■□□□ 1.44
UBE2D4-208ENST00000454350 DUOX1Q9NRD9 1551 aa24.05■■□□□ 1.44
UBE2D4-208ENST00000454350 C8orf58Q8NAV2 365 aa24.05■■□□□ 1.44
UBE2D4-208ENST00000454350 JDP2Q8WYK2 163 aa24.05■■□□□ 1.44
UBE2D4-208ENST00000454350 RTFDC1Q9BY42 306 aaPredicted RBP24.05■■□□□ 1.44
UBE2D4-208ENST00000454350 HACL1Q9UJ83 578 aa24.05■■□□□ 1.44
UBE2D4-208ENST00000454350 PASKQ96RG2 1323 aa24.05■■□□□ 1.44
UBE2D4-208ENST00000454350 ATP5J2-PTCD1G3V325 749 aa24.04■■□□□ 1.44
UBE2D4-208ENST00000454350 ELL2O00472 640 aaPredicted RBP24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 BBOX1O75936 387 aa24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 ITGBL1O95965 494 aaPredicted RBP24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 EPHX2P34913 555 aa24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 CALD1Q05682 793 aaKnown RBP24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 TRIM28Q13263 835 aaKnown RBP24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 IFFO2Q5TF58 517 aa24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 SP8Q8IXZ3 490 aa24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 LARGE2Q8N3Y3 721 aa24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 PHAXQ9H814 394 aaKnown RBP24.03■■□□□ 1.44
UBE2D4-208ENST00000454350 FAM89AQ96GI7 184 aa24.02■■□□□ 1.44
UBE2D4-208ENST00000454350 GRAPQ13588 217 aa24.01■■□□□ 1.43
UBE2D4-208ENST00000454350 AOC3Q16853 763 aa24.01■■□□□ 1.43
UBE2D4-208ENST00000454350 GRAPLQ8TC17 118 aaPredicted RBP24.01■■□□□ 1.43
UBE2D4-208ENST00000454350 SCNN1DP51172 638 aa24■■□□□ 1.43
UBE2D4-208ENST00000454350 EIF6P56537 245 aaKnown RBP24■■□□□ 1.43
UBE2D4-208ENST00000454350 SF3B3Q15393 1217 aaKnown RBP24■■□□□ 1.43
UBE2D4-208ENST00000454350 DDX46Q7L014 1031 aaKnown RBP24■■□□□ 1.43
UBE2D4-208ENST00000454350 VPS33BQ9H267 617 aa24■■□□□ 1.43
UBE2D4-208ENST00000454350 CREBZFQ9NS37 354 aa24■■□□□ 1.43
UBE2D4-208ENST00000454350 PPIP5K2O43314 1243 aa23.99■■□□□ 1.43
UBE2D4-208ENST00000454350 EAPPQ56P03 285 aaPredicted RBP23.99■■□□□ 1.43
UBE2D4-208ENST00000454350 TSPYL6Q8N831 410 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms