RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 U2AF1Q01081 240 aaKnown RBP eCLIP7.85□□□□□ -1.15
MDH1-208ENST00000454035 SLC15A2Q16348 729 aa7.85□□□□□ -1.15
MDH1-208ENST00000454035 IFFO2Q5TF58 517 aa7.85□□□□□ -1.15
MDH1-208ENST00000454035 ZNF454Q8N9F8 522 aa7.85□□□□□ -1.15
MDH1-208ENST00000454035 BANK1Q8NDB2 785 aa7.85□□□□□ -1.15
MDH1-208ENST00000454035 PHACTR3Q96KR7 559 aa7.85□□□□□ -1.15
MDH1-208ENST00000454035 LGR6Q9HBX8 967 aa7.85□□□□□ -1.15
MDH1-208ENST00000454035 TMOD3Q9NYL9 352 aa7.85□□□□□ -1.15
MDH1-208ENST00000454035 CEP350Q5VT06 3117 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 RNMTO43148 476 aaKnown RBP7.84□□□□□ -1.15
MDH1-208ENST00000454035 PRKAR2BP31323 418 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 C1QTNF8P60827 252 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 NFATC2IPQ8NCF5 419 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 GAS2L2Q8NHY3 880 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 PLEKHF1Q96S99 279 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 ADAM33Q9BZ11 813 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 ATG3Q9NT62 314 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 ASAP1Q9ULH1 1129 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 ZNF330Q9Y3S2 320 aaPredicted RBP7.84□□□□□ -1.15
MDH1-208ENST00000454035 ITGB4P16144 1822 aa7.84□□□□□ -1.15
MDH1-208ENST00000454035 PALLDQ8WX93 1383 aa7.84□□□□□ -1.16
MDH1-208ENST00000454035 TUBGCP6Q96RT7 1819 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 HMGB2P26583 209 aaKnown RBP7.83□□□□□ -1.16
MDH1-208ENST00000454035 KCNQ4P56696 695 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 PRSS12P56730 875 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 CABP4P57796 275 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 DIXDC1Q155Q3 683 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 TMEM259Q4ZIN3 620 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 RIC3Q7Z5B4 369 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 NPM2Q86SE8 214 aaKnown RBP7.83□□□□□ -1.16
MDH1-208ENST00000454035 IL17REQ8NFR9 667 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
MDH1-208ENST00000454035 CDCA7LQ96GN5 454 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 STK32BQ9NY57 414 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 RBM27Q9P2N5 1060 aaKnown RBP7.83□□□□□ -1.16
MDH1-208ENST00000454035 CCNL1Q9UK58 526 aaPredicted RBP7.83□□□□□ -1.16
MDH1-208ENST00000454035 LY75O60449 1722 aa7.83□□□□□ -1.16
MDH1-208ENST00000454035 PAPPAQ13219 1627 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 LOC102724428A0A0B4J2F2 783 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 GNAT3A8MTJ3 354 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 SIK1P57059 783 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 ZNF827Q17R98 1081 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 SPIRE2Q8WWL2 714 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 SLC4A9Q96Q91 983 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 FHDC1Q9C0D6 1143 aaPredicted RBP7.82□□□□□ -1.16
MDH1-208ENST00000454035 SLC52A2Q9HAB3 445 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 ADAMTS7Q9UKP4 1686 aa7.82□□□□□ -1.16
MDH1-208ENST00000454035 HTATSF1O43719 755 aaKnown RBP7.81□□□□□ -1.16
MDH1-208ENST00000454035 PPP2R2DQ66LE6 453 aa7.81□□□□□ -1.16
MDH1-208ENST00000454035 KHSRPQ92945 711 aaKnown RBP eCLIP7.81□□□□□ -1.162e-8■■□□□ 14.2
MDH1-208ENST00000454035 SYT17Q9BSW7 474 aa7.81□□□□□ -1.16
MDH1-208ENST00000454035 PNNQ9H307 717 aaKnown RBP7.81□□□□□ -1.16
MDH1-208ENST00000454035 GDPD2Q9HCC8 539 aa7.81□□□□□ -1.16
MDH1-208ENST00000454035 SCN11AQ9UI33 1791 aa7.81□□□□□ -1.16
MDH1-208ENST00000454035 CEMIPQ8WUJ3 1361 aa7.81□□□□□ -1.16
MDH1-208ENST00000454035 MAP3K5Q99683 1374 aa7.81□□□□□ -1.16
MDH1-208ENST00000454035 MRC1P22897 1456 aa7.81□□□□□ -1.16
MDH1-208ENST00000454035 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
MDH1-208ENST00000454035 NUDT7P0C024 238 aa7.8□□□□□ -1.16
MDH1-208ENST00000454035 ATP6V1AP38606 617 aa7.8□□□□□ -1.16
MDH1-208ENST00000454035 ITPK1Q13572 414 aa7.8□□□□□ -1.16
MDH1-208ENST00000454035 FAM198AQ9UFP1 575 aa7.8□□□□□ -1.16
MDH1-208ENST00000454035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.79□□□□□ -1.16
MDH1-208ENST00000454035 NFE2L2Q16236 605 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 CSPP1Q1MSJ5 1256 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 ARSIQ5FYB1 569 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 RC3H1Q5TC82 1133 aaKnown RBP7.79□□□□□ -1.16
MDH1-208ENST00000454035 MTMR14Q8NCE2 650 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 LINC00116Q8NCU8 138 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 SLC16A10Q8TF71 515 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 TFCP2L1Q9NZI6 479 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 ADAMTS8Q9UP79 889 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 ZNF831Q5JPB2 1677 aa7.79□□□□□ -1.16
MDH1-208ENST00000454035 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
MDH1-208ENST00000454035 PNPLA7Q6ZV29 1317 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 SPTLC1O15269 473 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 ANP32CO43423 234 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 PTCD1O75127 700 aaKnown RBP7.78□□□□□ -1.16
MDH1-208ENST00000454035 NEFMP07197 916 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 CD46P15529 392 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 TEFQ10587 303 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 SLC39A6Q13433 755 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 CCDC184Q52MB2 194 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 RTF1Q92541 710 aaKnown RBP7.78□□□□□ -1.16
MDH1-208ENST00000454035 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 QSER1Q2KHR3 1735 aa7.78□□□□□ -1.16
MDH1-208ENST00000454035 MOXD2PA6NHM9 499 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 GIGYF1O75420 1035 aaPredicted RBP7.77□□□□□ -1.17
MDH1-208ENST00000454035 COL9A1P20849 921 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 TMPOP42166 694 aaKnown RBP7.77□□□□□ -1.17
MDH1-208ENST00000454035 DCTN1Q14203 1278 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 WDR43Q15061 677 aaKnown RBP eCLIP7.77□□□□□ -1.17
MDH1-208ENST00000454035 GPR162Q16538 588 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 ZNF790Q6PG37 636 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 MCM10Q7L590 875 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 AMIGO3Q86WK7 504 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 COL23A1Q86Y22 540 aaPredicted RBP7.77□□□□□ -1.17
MDH1-208ENST00000454035 NUTM1Q86Y26 1132 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 FLAD1Q8NFF5 587 aa7.77□□□□□ -1.17
MDH1-208ENST00000454035 RUNDC1Q96C34 613 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms