RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DDX11L8A8MPP1 907 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 CPA1P15085 419 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 HSPA4P34932 840 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 KCNJ4P48050 445 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 PTH1RQ03431 593 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 RUFY2Q8WXA3 655 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 LSG1Q9H089 658 aaKnown RBP14.25□□□□□ -0.13
VTA1-203ENST00000452973 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 ABCA3Q99758 1704 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 DNAJC2Q99543 621 aaKnown RBP14.25□□□□□ -0.13
VTA1-203ENST00000452973 ERBB4Q15303 1308 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 RAD50Q92878 1312 aa14.25□□□□□ -0.13
VTA1-203ENST00000452973 CASP7P55210 303 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 DBNLQ9UJU6 430 aaKnown RBP14.24□□□□□ -0.13
VTA1-203ENST00000452973 H7C1W4 665 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 GPTP24298 496 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 ANAPC15P60006 121 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 FOXO4P98177 505 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 RABL6Q3YEC7 729 aaPredicted RBP14.24□□□□□ -0.13
VTA1-203ENST00000452973 TNNI3KQ59H18 835 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 DBNDD2Q9BQY9 259 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 FPGT-TNNI3KV9GXZ4 949 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 AFDNP55196 1824 aaKnown RBP14.24□□□□□ -0.13
VTA1-203ENST00000452973 NMIQ13287 307 aaPredicted RBP14.24□□□□□ -0.13
VTA1-203ENST00000452973 PRPF40BQ6NWY9 871 aaKnown RBP14.24□□□□□ -0.13
VTA1-203ENST00000452973 FAM89AQ96GI7 184 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 SNX14Q9Y5W7 946 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 KCPQ6ZWJ8 1503 aa14.24□□□□□ -0.13
VTA1-203ENST00000452973 STARD3NLO95772 234 aa14.23□□□□□ -0.13
VTA1-203ENST00000452973 DTNBO60941 627 aa14.23□□□□□ -0.13
VTA1-203ENST00000452973 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
VTA1-203ENST00000452973 CHAMP1Q96JM3 812 aa14.23□□□□□ -0.13
VTA1-203ENST00000452973 NHSL1Q5SYE7 1610 aa14.23□□□□□ -0.13
VTA1-203ENST00000452973 TIMM10P62072 90 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 KIF6Q6ZMV9 814 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 CCDC191Q8NCU4 936 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 ACSBG1Q96GR2 724 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 CHGBP05060 677 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 SYNE4Q8N205 404 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 GLI3P10071 1580 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 CASTP20810 708 aaKnown RBP14.22□□□□□ -0.13
VTA1-203ENST00000452973 LRRC24Q50LG9 513 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 MCTP1Q6DN14 999 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 BRPF3Q9ULD4 1205 aa14.22□□□□□ -0.13
VTA1-203ENST00000452973 A0A0D9SFI3 127 aa14.21□□□□□ -0.13
VTA1-203ENST00000452973 NUCB2P80303 420 aa14.21□□□□□ -0.13
VTA1-203ENST00000452973 FOXD4L6Q3SYB3 417 aaPredicted RBP14.21□□□□□ -0.13
VTA1-203ENST00000452973 FOXD4L3Q6VB84 417 aaPredicted RBP14.21□□□□□ -0.13
VTA1-203ENST00000452973 PUS3Q9BZE2 481 aaKnown RBP14.21□□□□□ -0.14
VTA1-203ENST00000452973 BAG4O95429 457 aaKnown RBP14.2□□□□□ -0.14
VTA1-203ENST00000452973 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
VTA1-203ENST00000452973 DDX46Q7L014 1031 aaKnown RBP14.2□□□□□ -0.14
VTA1-203ENST00000452973 SLC4A9Q96Q91 983 aa14.2□□□□□ -0.14
VTA1-203ENST00000452973 CWC22Q9HCG8 908 aaKnown RBP14.2□□□□□ -0.14
VTA1-203ENST00000452973 ROBO1Q9Y6N7 1651 aa14.2□□□□□ -0.14
VTA1-203ENST00000452973 GOLGA6L22H0YM25 854 aa14.2□□□□□ -0.14
VTA1-203ENST00000452973 MCM2P49736 904 aa14.2□□□□□ -0.14
VTA1-203ENST00000452973 HLFQ16534 295 aa14.2□□□□□ -0.14
VTA1-203ENST00000452973 ADCK5Q3MIX3 580 aa14.2□□□□□ -0.14
VTA1-203ENST00000452973 JAKMIP1Q96N16 626 aaKnown RBP14.2□□□□□ -0.14
VTA1-203ENST00000452973 TEX13AQ9BXU3 409 aaPredicted RBP14.2□□□□□ -0.14
VTA1-203ENST00000452973 TBC1D2BQ9UPU7 963 aa14.2□□□□□ -0.14
VTA1-203ENST00000452973 SHANK3Q9BYB0 1731 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 NCLP19338 710 aaKnown RBP14.19□□□□□ -0.14
VTA1-203ENST00000452973 ZBTB1Q9Y2K1 713 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 LAMB4A4D0S4 1761 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 TNS2Q63HR2 1409 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 AK2P54819 239 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 CCDC57Q2TAC2 916 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 TAF7LQ5H9L4 462 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 ATG9AQ7Z3C6 839 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 RBM8AQ9Y5S9 174 aaKnown RBP14.19□□□□□ -0.14
VTA1-203ENST00000452973 CCDC171Q6TFL3 1326 aa14.19□□□□□ -0.14
VTA1-203ENST00000452973 TOGARAM1Q9Y4F4 1720 aa14.18□□□□□ -0.14
VTA1-203ENST00000452973 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
VTA1-203ENST00000452973 DDB1Q16531 1140 aa14.18□□□□□ -0.14
VTA1-203ENST00000452973 ZNF589Q86UQ0 364 aaPredicted RBP14.18□□□□□ -0.14
VTA1-203ENST00000452973 HIP1O00291 1037 aa14.18□□□□□ -0.14
VTA1-203ENST00000452973 ATP5JP18859 108 aa14.18□□□□□ -0.14
VTA1-203ENST00000452973 SLFNL1Q499Z3 407 aa14.18□□□□□ -0.14
VTA1-203ENST00000452973 SEC62Q99442 399 aaKnown RBP14.18□□□□□ -0.14
VTA1-203ENST00000452973 ZDHHC9Q9Y397 364 aa14.18□□□□□ -0.14
VTA1-203ENST00000452973 ZKSCAN1P17029 563 aaPredicted RBP14.17□□□□□ -0.14
VTA1-203ENST00000452973 CCDC129Q6ZRS4 1044 aa14.17□□□□□ -0.14
VTA1-203ENST00000452973 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
VTA1-203ENST00000452973 GOLIM4O00461 696 aa14.17□□□□□ -0.14
VTA1-203ENST00000452973 VSIG10Q8N0Z9 540 aa14.17□□□□□ -0.14
VTA1-203ENST00000452973 TCEANC2Q96MN5 208 aa14.17□□□□□ -0.14
VTA1-203ENST00000452973 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
VTA1-203ENST00000452973 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
VTA1-203ENST00000452973 EYA2O00167 538 aa14.16□□□□□ -0.14
VTA1-203ENST00000452973 CYP19A1P11511 503 aaPredicted RBP14.16□□□□□ -0.14
VTA1-203ENST00000452973 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
VTA1-203ENST00000452973 CREB3L3Q68CJ9 461 aa14.16□□□□□ -0.14
VTA1-203ENST00000452973 GOLGA6L3A6NEY3 463 aa14.16□□□□□ -0.14
VTA1-203ENST00000452973 EPB41L2O43491 1005 aaKnown RBP14.16□□□□□ -0.14
VTA1-203ENST00000452973 IL15P40933 162 aaPredicted RBP14.16□□□□□ -0.14
VTA1-203ENST00000452973 COL9A3Q14050 684 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms