RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
CHFR-205ENST00000450056 TNRQ92752 1358 aa16.54■□□□□ 0.24
CHFR-205ENST00000450056 LRRC8AQ8IWT6 810 aa16.54■□□□□ 0.24
CHFR-205ENST00000450056 CALCOCO1Q9P1Z2 691 aa16.54■□□□□ 0.24
CHFR-205ENST00000450056 SLU7O95391 586 aaKnown RBP16.54■□□□□ 0.24
CHFR-205ENST00000450056 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
CHFR-205ENST00000450056 ISM2Q6H9L7 571 aa16.54■□□□□ 0.24
CHFR-205ENST00000450056 BLOC1S2Q6QNY1 142 aa16.54■□□□□ 0.24
CHFR-205ENST00000450056 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 CLASRPQ8N2M8 674 aaKnown RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 NEK11Q8NG66 645 aa16.53■□□□□ 0.24
CHFR-205ENST00000450056 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 ZSCAN31Q96LW9 406 aaPredicted RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 SCAND2PQ9GZW5 306 aaPredicted RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 MORC2Q9Y6X9 1032 aaPredicted RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 C3P01024 1663 aa16.53■□□□□ 0.24
CHFR-205ENST00000450056 KNDC1Q76NI1 1749 aa16.53■□□□□ 0.24
CHFR-205ENST00000450056 SDF4Q9BRK5 362 aa16.53■□□□□ 0.24
CHFR-205ENST00000450056 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 BIN1O00499 593 aa16.53■□□□□ 0.24
CHFR-205ENST00000450056 JAK2O60674 1132 aa16.53■□□□□ 0.24
CHFR-205ENST00000450056 PDCP20941 246 aa16.53■□□□□ 0.24
CHFR-205ENST00000450056 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 SH2B1Q9NRF2 756 aaPredicted RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 PA2G4Q9UQ80 394 aaKnown RBP16.53■□□□□ 0.24
CHFR-205ENST00000450056 SNW1Q13573 536 aaKnown RBP16.52■□□□□ 0.24
CHFR-205ENST00000450056 HDGFL1Q5TGJ6 251 aa16.52■□□□□ 0.24
CHFR-205ENST00000450056 NUTM2GQ5VZR2 741 aa16.52■□□□□ 0.24
CHFR-205ENST00000450056 C11orf57Q6ZUT1 292 aaPredicted RBP16.52■□□□□ 0.24
CHFR-205ENST00000450056 C14orf37Q86TY3 774 aa16.52■□□□□ 0.24
CHFR-205ENST00000450056 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
CHFR-205ENST00000450056 FAM227BQ96M60 508 aa16.52■□□□□ 0.24
CHFR-205ENST00000450056 FTOQ9C0B1 505 aaKnown RBP eCLIP16.52■□□□□ 0.24
CHFR-205ENST00000450056 USP44Q9H0E7 712 aa16.52■□□□□ 0.24
CHFR-205ENST00000450056 SIL1Q9H173 461 aa16.52■□□□□ 0.24
CHFR-205ENST00000450056 AMPHP49418 695 aa16.52■□□□□ 0.23
CHFR-205ENST00000450056 ARHGAP29Q52LW3 1261 aa16.52■□□□□ 0.23
CHFR-205ENST00000450056 MNS1Q8NEH6 495 aa16.52■□□□□ 0.23
CHFR-205ENST00000450056 AOPEPQ8N6M6 819 aa16.51■□□□□ 0.23
CHFR-205ENST00000450056 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
CHFR-205ENST00000450056 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
CHFR-205ENST00000450056 NBPF7P0C2Y1 421 aaPredicted RBP16.51■□□□□ 0.23
CHFR-205ENST00000450056 CCDC73Q6ZRK6 1079 aa16.51■□□□□ 0.23
CHFR-205ENST00000450056 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
CHFR-205ENST00000450056 FER1L4A9Z1Z3 1794 aa16.51■□□□□ 0.23
CHFR-205ENST00000450056 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
CHFR-205ENST00000450056 FSD1Q9BTV5 496 aa16.51■□□□□ 0.23
CHFR-205ENST00000450056 ESF1Q9H501 851 aaKnown RBP16.51■□□□□ 0.23
CHFR-205ENST00000450056 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
CHFR-205ENST00000450056 HNRNPH2P55795 449 aaKnown RBP16.5■□□□□ 0.23
CHFR-205ENST00000450056 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 AACSQ86V21 672 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 CLSTN2Q9H4D0 955 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 NPHP3Q7Z494 1330 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 ME1P48163 572 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 RBM6P78332 1123 aaKnown RBP16.5■□□□□ 0.23
CHFR-205ENST00000450056 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 ERO1AQ96HE7 468 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 URI1O94763 535 aaPredicted RBP16.5■□□□□ 0.23
CHFR-205ENST00000450056 BMS1Q14692 1282 aaKnown RBP16.5■□□□□ 0.23
CHFR-205ENST00000450056 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 SKIDA1Q1XH10 827 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 TMC6Q7Z403 805 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 UBXN4Q92575 508 aa16.5■□□□□ 0.23
CHFR-205ENST00000450056 CCDC171Q6TFL3 1326 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 CREB3L3Q68CJ9 461 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 PLA2G4DQ86XP0 818 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 CCAR1Q8IX12 1150 aaKnown RBP16.49■□□□□ 0.23
CHFR-205ENST00000450056 PI4K2BQ8TCG2 481 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 BRF1Q92994 677 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 CCDC34Q96HJ3 373 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 C9orf78Q9NZ63 289 aaPredicted RBP16.49■□□□□ 0.23
CHFR-205ENST00000450056 DNAI1Q9UI46 699 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 GLRX3O76003 335 aaKnown RBP16.49■□□□□ 0.23
CHFR-205ENST00000450056 LRRN4CLQ8ND94 238 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 SALL3Q9BXA9 1300 aa16.49■□□□□ 0.23
CHFR-205ENST00000450056 NRDCO43847 1150 aa16.48■□□□□ 0.23
CHFR-205ENST00000450056 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
CHFR-205ENST00000450056 EPC1Q9H2F5 836 aa16.48■□□□□ 0.23
CHFR-205ENST00000450056 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
CHFR-205ENST00000450056 TEX35Q5T0J7 233 aa16.48■□□□□ 0.23
CHFR-205ENST00000450056 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
CHFR-205ENST00000450056 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
CHFR-205ENST00000450056 TMCO3Q6UWJ1 677 aa16.48■□□□□ 0.23
CHFR-205ENST00000450056 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
CHFR-205ENST00000450056 SEC31AO94979 1220 aaKnown RBP16.47■□□□□ 0.23
CHFR-205ENST00000450056 ST3GAL1Q11201 340 aa16.47■□□□□ 0.23
CHFR-205ENST00000450056 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
CHFR-205ENST00000450056 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
CHFR-205ENST00000450056 PSMA5P28066 241 aa16.47■□□□□ 0.23
CHFR-205ENST00000450056 TAF6LQ9Y6J9 622 aa16.47■□□□□ 0.23
CHFR-205ENST00000450056 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
CHFR-205ENST00000450056 SSH2Q76I76 1423 aa16.47■□□□□ 0.23
CHFR-205ENST00000450056 NMIQ13287 307 aaPredicted RBP16.46■□□□□ 0.23
CHFR-205ENST00000450056 C10orf67Q8IYJ2 551 aa16.46■□□□□ 0.23
CHFR-205ENST00000450056 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.23
CHFR-205ENST00000450056 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.23
CHFR-205ENST00000450056 CCT2P78371 535 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms