RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 WWC1Q8IX03 1113 aa18.89■□□□□ 0.61
USP39-206ENST00000448971 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
USP39-206ENST00000448971 CREBZFQ9NS37 354 aa18.89■□□□□ 0.61
USP39-206ENST00000448971 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
USP39-206ENST00000448971 SOGA3Q5TF21 947 aa18.88■□□□□ 0.61
USP39-206ENST00000448971 KIF6Q6ZMV9 814 aa18.88■□□□□ 0.61
USP39-206ENST00000448971 CCER2I3L3R5 266 aa18.87■□□□□ 0.61
USP39-206ENST00000448971 NPHP1O15259 732 aa18.87■□□□□ 0.61
USP39-206ENST00000448971 HOXB7P09629 217 aa18.87■□□□□ 0.61
USP39-206ENST00000448971 CACNA1SQ13698 1873 aa18.87■□□□□ 0.61
USP39-206ENST00000448971 HDGFL1Q5TGJ6 251 aa18.87■□□□□ 0.61
USP39-206ENST00000448971 L3MBTL3Q96JM7 780 aaPredicted RBP18.87■□□□□ 0.61
USP39-206ENST00000448971 ARFGEF2Q9Y6D5 1785 aa18.86■□□□□ 0.61
USP39-206ENST00000448971 NBPF5PQ86XG9 351 aaPredicted RBP18.86■□□□□ 0.61
USP39-206ENST00000448971 PASKQ96RG2 1323 aa18.85■□□□□ 0.61
USP39-206ENST00000448971 ANXA1P04083 346 aa18.85■□□□□ 0.61
USP39-206ENST00000448971 DUSP27Q5VZP5 1158 aa18.85■□□□□ 0.61
USP39-206ENST00000448971 TSR2Q969E8 191 aaKnown RBP18.85■□□□□ 0.61
USP39-206ENST00000448971 RGL2O15211 777 aa18.84■□□□□ 0.61
USP39-206ENST00000448971 NPR1P16066 1061 aa18.84■□□□□ 0.61
USP39-206ENST00000448971 ZBTB3Q9H5J0 574 aa18.84■□□□□ 0.61
USP39-206ENST00000448971 TAF1DQ9H5J8 278 aaPredicted RBP18.84■□□□□ 0.61
USP39-206ENST00000448971 MKRN1Q9UHC7 482 aaKnown RBP18.84■□□□□ 0.61
USP39-206ENST00000448971 IL16Q14005 1332 aa18.83■□□□□ 0.61
USP39-206ENST00000448971 MAP3K15Q6ZN16 1313 aa18.83■□□□□ 0.61
USP39-206ENST00000448971 IQCA1LA6NCM1 817 aa18.83■□□□□ 0.6
USP39-206ENST00000448971 ITGBL1O95965 494 aaPredicted RBP18.83■□□□□ 0.6
USP39-206ENST00000448971 PROSER3Q2NL68 480 aa18.83■□□□□ 0.6
USP39-206ENST00000448971 CCDC93Q567U6 631 aa18.83■□□□□ 0.6
USP39-206ENST00000448971 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
USP39-206ENST00000448971 TPTE2Q6XPS3 522 aa18.83■□□□□ 0.6
USP39-206ENST00000448971 TTLL7Q6ZT98 887 aa18.83■□□□□ 0.6
USP39-206ENST00000448971 CHPF2Q9P2E5 772 aa18.83■□□□□ 0.6
USP39-206ENST00000448971 SCN4AP35499 1836 aa18.83■□□□□ 0.6
USP39-206ENST00000448971 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
USP39-206ENST00000448971 FKBP4Q02790 459 aaKnown RBP eCLIP18.82■□□□□ 0.6
USP39-206ENST00000448971 LDHDQ86WU2 507 aa18.82■□□□□ 0.6
USP39-206ENST00000448971 NIP7Q9Y221 180 aaKnown RBP eCLIP18.82■□□□□ 0.6
USP39-206ENST00000448971 PDIA6Q15084 440 aa18.81■□□□□ 0.6
USP39-206ENST00000448971 HLFQ16534 295 aa18.81■□□□□ 0.6
USP39-206ENST00000448971 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
USP39-206ENST00000448971 ZNF277Q9NRM2 450 aaPredicted RBP18.81■□□□□ 0.6
USP39-206ENST00000448971 CNTNAP1P78357 1384 aa18.81■□□□□ 0.6
USP39-206ENST00000448971 FANCIQ9NVI1 1328 aa18.8■□□□□ 0.6
USP39-206ENST00000448971 ERVV-1B6SEH8 477 aa18.8■□□□□ 0.6
USP39-206ENST00000448971 AIMP1Q12904 312 aaKnown RBP18.8■□□□□ 0.6
USP39-206ENST00000448971 WDR63Q8IWG1 891 aa18.8■□□□□ 0.6
USP39-206ENST00000448971 RTKN2Q8IZC4 609 aa18.8■□□□□ 0.6
USP39-206ENST00000448971 DBF4Q9UBU7 674 aaPredicted RBP18.8■□□□□ 0.6
USP39-206ENST00000448971 ZNF541Q9H0D2 1346 aa18.79■□□□□ 0.6
USP39-206ENST00000448971 LRP10Q7Z4F1 713 aa18.79■□□□□ 0.6
USP39-206ENST00000448971 C8orf58Q8NAV2 365 aa18.79■□□□□ 0.6
USP39-206ENST00000448971 XAGE3Q8WTP9 111 aa18.79■□□□□ 0.6
USP39-206ENST00000448971 FAM177BA6PVY3 158 aa18.78■□□□□ 0.6
USP39-206ENST00000448971 FZD9O00144 591 aa18.78■□□□□ 0.6
USP39-206ENST00000448971 FOXN1O15353 648 aa18.78■□□□□ 0.6
USP39-206ENST00000448971 ALDH1B1P30837 517 aa18.78■□□□□ 0.6
USP39-206ENST00000448971 COPS6Q7L5N1 327 aa18.78■□□□□ 0.6
USP39-206ENST00000448971 VEGFBP49765 207 aa18.77■□□□□ 0.6
USP39-206ENST00000448971 MIER1Q8N108 512 aa18.77■□□□□ 0.6
USP39-206ENST00000448971 SYNE4Q8N205 404 aa18.77■□□□□ 0.6
USP39-206ENST00000448971 HACL1Q9UJ83 578 aa18.77■□□□□ 0.6
USP39-206ENST00000448971 NUP98P52948 1817 aa18.77■□□□□ 0.59
USP39-206ENST00000448971 SNED1Q8TER0 1413 aa18.76■□□□□ 0.59
USP39-206ENST00000448971 TMEM88BA6NKF7 163 aa18.76■□□□□ 0.59
USP39-206ENST00000448971 GPTP24298 496 aa18.76■□□□□ 0.59
USP39-206ENST00000448971 IARSP41252 1262 aaKnown RBP18.76■□□□□ 0.59
USP39-206ENST00000448971 TWISTNBQ3B726 338 aaPredicted RBP18.76■□□□□ 0.59
USP39-206ENST00000448971 CRY2Q49AN0 593 aa18.76■□□□□ 0.59
USP39-206ENST00000448971 GIGYF2Q6Y7W6 1299 aaKnown RBP18.76■□□□□ 0.59
USP39-206ENST00000448971 TSPYL6Q8N831 410 aa18.76■□□□□ 0.59
USP39-206ENST00000448971 CHMP4AQ9BY43 222 aa18.76■□□□□ 0.59
USP39-206ENST00000448971 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
USP39-206ENST00000448971 HYPKQ9NX55 129 aa18.76■□□□□ 0.59
USP39-206ENST00000448971 GTF2E1P29083 439 aaPredicted RBP18.75■□□□□ 0.59
USP39-206ENST00000448971 EPHX2P34913 555 aa18.75■□□□□ 0.59
USP39-206ENST00000448971 EAPPQ56P03 285 aaPredicted RBP18.75■□□□□ 0.59
USP39-206ENST00000448971 CCDC30Q5VVM6 783 aa18.75■□□□□ 0.59
USP39-206ENST00000448971 ANKRD36CQ5JPF3 1778 aa18.75■□□□□ 0.59
USP39-206ENST00000448971 ADAMTSL1Q8N6G6 1762 aa18.75■□□□□ 0.59
USP39-206ENST00000448971 GOLGA2Q08379 1002 aa18.74■□□□□ 0.59
USP39-206ENST00000448971 PSMD1Q99460 953 aa18.74■□□□□ 0.59
USP39-206ENST00000448971 STK31Q9BXU1 1019 aa18.74■□□□□ 0.59
USP39-206ENST00000448971 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
USP39-206ENST00000448971 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
USP39-206ENST00000448971 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
USP39-206ENST00000448971 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
USP39-206ENST00000448971 SAMD1Q6SPF0 538 aaPredicted RBP18.73■□□□□ 0.59
USP39-206ENST00000448971 PNMA8AQ86V59 439 aaPredicted RBP18.73■□□□□ 0.59
USP39-206ENST00000448971 CNTROBQ8N137 903 aa18.73■□□□□ 0.59
USP39-206ENST00000448971 GPC2Q8N158 579 aa18.73■□□□□ 0.59
USP39-206ENST00000448971 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
USP39-206ENST00000448971 WBP1LQ9NX94 342 aa18.73■□□□□ 0.59
USP39-206ENST00000448971 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
USP39-206ENST00000448971 RNF123Q5XPI4 1314 aa18.73■□□□□ 0.59
USP39-206ENST00000448971 MAP1SQ66K74 1059 aaPredicted RBP18.72■□□□□ 0.59
USP39-206ENST00000448971 NUTM1Q86Y26 1132 aa18.72■□□□□ 0.59
USP39-206ENST00000448971 SPINK5Q9NQ38 1064 aaPredicted RBP18.72■□□□□ 0.59
USP39-206ENST00000448971 ZNF521Q96K83 1311 aa18.72■□□□□ 0.59
USP39-206ENST00000448971 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms