RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 ZKSCAN2Q63HK3 967 aa20.4■□□□□ 0.86
BCRP3-201ENST00000447261 PRPF40BQ6NWY9 871 aaKnown RBP20.4■□□□□ 0.86
BCRP3-201ENST00000447261 TTLL7Q6ZT98 887 aa20.4■□□□□ 0.86
BCRP3-201ENST00000447261 MAP3K15Q6ZN16 1313 aa20.4■□□□□ 0.86
BCRP3-201ENST00000447261 SLX4Q8IY92 1834 aa20.39■□□□□ 0.86
BCRP3-201ENST00000447261 CHL1O00533 1208 aa20.39■□□□□ 0.85
BCRP3-201ENST00000447261 EIF2S2P20042 333 aaKnown RBP20.39■□□□□ 0.85
BCRP3-201ENST00000447261 RRAGCQ9HB90 399 aa20.39■□□□□ 0.85
BCRP3-201ENST00000447261 ERVV-1B6SEH8 477 aa20.38■□□□□ 0.85
BCRP3-201ENST00000447261 SSH1Q8WYL5 1049 aa20.38■□□□□ 0.85
BCRP3-201ENST00000447261 FRAT1Q92837 279 aaPredicted RBP20.38■□□□□ 0.85
BCRP3-201ENST00000447261 ZBTB3Q9H5J0 574 aa20.38■□□□□ 0.85
BCRP3-201ENST00000447261 SMC4Q9NTJ3 1288 aa20.38■□□□□ 0.85
BCRP3-201ENST00000447261 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
BCRP3-201ENST00000447261 ZC3H4Q9UPT8 1303 aaKnown RBP20.38■□□□□ 0.85
BCRP3-201ENST00000447261 NUP98P52948 1817 aa20.38■□□□□ 0.85
BCRP3-201ENST00000447261 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
BCRP3-201ENST00000447261 VAMP4O75379 141 aa20.37■□□□□ 0.85
BCRP3-201ENST00000447261 TIAM2Q8IVF5 1701 aa20.37■□□□□ 0.85
BCRP3-201ENST00000447261 NPR1P16066 1061 aa20.37■□□□□ 0.85
BCRP3-201ENST00000447261 GPTP24298 496 aa20.37■□□□□ 0.85
BCRP3-201ENST00000447261 BABAM1Q9NWV8 329 aa20.37■□□□□ 0.85
BCRP3-201ENST00000447261 FER1L6Q2WGJ9 1857 aa20.36■□□□□ 0.85
BCRP3-201ENST00000447261 TAOK3Q9H2K8 898 aa20.36■□□□□ 0.85
BCRP3-201ENST00000447261 ERBB4Q15303 1308 aa20.35■□□□□ 0.85
BCRP3-201ENST00000447261 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
BCRP3-201ENST00000447261 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
BCRP3-201ENST00000447261 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
BCRP3-201ENST00000447261 NECTIN2Q92692 538 aa20.35■□□□□ 0.85
BCRP3-201ENST00000447261 NYXQ9GZU5 481 aa20.35■□□□□ 0.85
BCRP3-201ENST00000447261 ARFGEF2Q9Y6D5 1785 aa20.35■□□□□ 0.85
BCRP3-201ENST00000447261 GLTPD2A6NH11 291 aa20.34■□□□□ 0.85
BCRP3-201ENST00000447261 ERFEQ4G0M1 354 aa20.34■□□□□ 0.85
BCRP3-201ENST00000447261 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
BCRP3-201ENST00000447261 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
BCRP3-201ENST00000447261 KLRG2A4D1S0 409 aaPredicted RBP20.33■□□□□ 0.85
BCRP3-201ENST00000447261 ANXA1P04083 346 aa20.33■□□□□ 0.85
BCRP3-201ENST00000447261 TWISTNBQ3B726 338 aaPredicted RBP20.33■□□□□ 0.85
BCRP3-201ENST00000447261 DZIP1LQ8IYY4 767 aaKnown RBP20.33■□□□□ 0.85
BCRP3-201ENST00000447261 ARHGAP45Q92619 1136 aa20.33■□□□□ 0.85
BCRP3-201ENST00000447261 ABCC12Q96J65 1359 aa20.33■□□□□ 0.84
BCRP3-201ENST00000447261 PROSER3Q2NL68 480 aa20.32■□□□□ 0.84
BCRP3-201ENST00000447261 ATF7IPQ6VMQ6 1270 aa20.32■□□□□ 0.84
BCRP3-201ENST00000447261 PANK1Q8TE04 598 aa20.32■□□□□ 0.84
BCRP3-201ENST00000447261 UBN2Q6ZU65 1347 aa20.32■□□□□ 0.84
BCRP3-201ENST00000447261 DICER1Q9UPY3 1922 aaKnown RBP20.32■□□□□ 0.84
BCRP3-201ENST00000447261 APLP1P51693 650 aa20.31■□□□□ 0.84
BCRP3-201ENST00000447261 PDIA6Q15084 440 aa20.31■□□□□ 0.84
BCRP3-201ENST00000447261 CCDC93Q567U6 631 aa20.31■□□□□ 0.84
BCRP3-201ENST00000447261 GIGYF2Q6Y7W6 1299 aaKnown RBP20.31■□□□□ 0.84
BCRP3-201ENST00000447261 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
BCRP3-201ENST00000447261 LTBP3Q9NS15 1303 aa20.31■□□□□ 0.84
BCRP3-201ENST00000447261 KRT24Q2M2I5 525 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 SUSD4Q5VX71 490 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 DPY19L2Q6NUT2 758 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
BCRP3-201ENST00000447261 COG6Q9Y2V7 657 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 VEGFAP15692 232 aaPredicted RBP20.3■□□□□ 0.84
BCRP3-201ENST00000447261 ALDH1B1P30837 517 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
BCRP3-201ENST00000447261 OLFM4Q6UX06 510 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 FTSJ3Q8IY81 847 aaKnown RBP20.3■□□□□ 0.84
BCRP3-201ENST00000447261 TSPYL6Q8N831 410 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 C8orf58Q8NAV2 365 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 C7orf43Q8WVR3 580 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 CLUAP1Q96AJ1 413 aa20.3■□□□□ 0.84
BCRP3-201ENST00000447261 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
BCRP3-201ENST00000447261 TRIM27P14373 513 aa20.29■□□□□ 0.84
BCRP3-201ENST00000447261 FSTL1Q12841 308 aa20.29■□□□□ 0.84
BCRP3-201ENST00000447261 MVPQ14764 893 aaKnown RBP20.29■□□□□ 0.84
BCRP3-201ENST00000447261 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
BCRP3-201ENST00000447261 ZNF34Q8IZ26 560 aa20.29■□□□□ 0.84
BCRP3-201ENST00000447261 MRPL50Q8N5N7 158 aaKnown RBP20.29■□□□□ 0.84
BCRP3-201ENST00000447261 RPGRQ92834 1020 aaKnown RBP20.28■□□□□ 0.84
BCRP3-201ENST00000447261 IBTKQ9P2D0 1353 aaPredicted RBP20.27■□□□□ 0.84
BCRP3-201ENST00000447261 RLBP1P12271 317 aa20.27■□□□□ 0.84
BCRP3-201ENST00000447261 COPS6Q7L5N1 327 aa20.27■□□□□ 0.84
BCRP3-201ENST00000447261 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.84
BCRP3-201ENST00000447261 XAGE3Q8WTP9 111 aa20.27■□□□□ 0.84
BCRP3-201ENST00000447261 NTSR2O95665 410 aa20.26■□□□□ 0.83
BCRP3-201ENST00000447261 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
BCRP3-201ENST00000447261 CRY2Q49AN0 593 aa20.26■□□□□ 0.83
BCRP3-201ENST00000447261 PARP10Q53GL7 1025 aa20.26■□□□□ 0.83
BCRP3-201ENST00000447261 RTKN2Q8IZC4 609 aa20.26■□□□□ 0.83
BCRP3-201ENST00000447261 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
BCRP3-201ENST00000447261 ZNF277Q9NRM2 450 aaPredicted RBP20.26■□□□□ 0.83
BCRP3-201ENST00000447261 DDX19BQ9UMR2 479 aa20.26■□□□□ 0.83
BCRP3-201ENST00000447261 CHMP4BQ9H444 224 aaKnown RBP20.25■□□□□ 0.83
BCRP3-201ENST00000447261 DDX21Q9NR30 783 aaKnown RBP eCLIP20.25■□□□□ 0.83
BCRP3-201ENST00000447261 HDGFL1Q5TGJ6 251 aa20.24■□□□□ 0.83
BCRP3-201ENST00000447261 UTP14AQ9BVJ6 771 aaKnown RBP20.24■□□□□ 0.83
BCRP3-201ENST00000447261 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
BCRP3-201ENST00000447261 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
BCRP3-201ENST00000447261 DDNO94850 711 aaPredicted RBP20.24■□□□□ 0.83
BCRP3-201ENST00000447261 WDR90Q96KV7 1748 aa20.23■□□□□ 0.83
BCRP3-201ENST00000447261 POTECB2RU33 542 aa20.23■□□□□ 0.83
BCRP3-201ENST00000447261 HTRA3P83110 453 aa20.23■□□□□ 0.83
BCRP3-201ENST00000447261 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
BCRP3-201ENST00000447261 RBM17Q96I25 401 aaKnown RBP20.23■□□□□ 0.83
BCRP3-201ENST00000447261 API5Q9BZZ5 524 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms