RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 CNTROBQ8N137 903 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 KLHL34Q8N239 644 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 NBPF15Q8N660 670 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 DDX54Q8TDD1 881 aaKnown RBP3.46□□□□□ -1.86
LINC00393-201ENST00000443621 RUFY2Q8WXA3 655 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 CHMP4CQ96CF2 233 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 EVI5LQ96CN4 794 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 NGLY1Q96IV0 654 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 GJD4Q96KN9 370 aaPredicted RBP3.46□□□□□ -1.86
LINC00393-201ENST00000443621 C22orf23Q9BZE7 217 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 LNPKQ9C0E8 428 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 AKAP2Q9Y2D5 859 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 CARMIL3Q8ND23 1372 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 SBF2Q86WG5 1849 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 AK9Q5TCS8 1911 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 BCORQ6W2J9 1755 aa3.46□□□□□ -1.86
LINC00393-201ENST00000443621 LOC102724428A0A0B4J2F2 783 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 PNMA6EA0A0J9YXQ4 647 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 ATP5JP18859 108 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 PTMSP20962 102 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 MCCP23508 829 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 RFX5P48382 616 aaPredicted RBP3.45□□□□□ -1.86
LINC00393-201ENST00000443621 SIK1P57059 783 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 FOXO4P98177 505 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 PTPN12Q05209 780 aaKnown RBP3.45□□□□□ -1.86
LINC00393-201ENST00000443621 RABEP1Q15276 862 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 PROSER3Q2NL68 480 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 SLC27A3Q5K4L6 730 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 SLC10A5Q5PT55 438 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 ZNF772Q68DY9 489 aaPredicted RBP3.45□□□□□ -1.86
LINC00393-201ENST00000443621 FAM196AQ6ZSG2 479 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 MARCH10Q8NA82 808 aaPredicted RBP3.45□□□□□ -1.86
LINC00393-201ENST00000443621 RGS22Q8NE09 1264 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 PI4K2BQ8TCG2 481 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 KAZALD1Q96I82 304 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 ANP32EQ9BTT0 268 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 ALDH8A1Q9H2A2 487 aaPredicted RBP3.45□□□□□ -1.86
LINC00393-201ENST00000443621 BICC1Q9H694 974 aaKnown RBP3.45□□□□□ -1.86
LINC00393-201ENST00000443621 ECHDC1Q9NTX5 307 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 CCDC87Q9NVE4 849 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 USP21Q9UK80 565 aa3.45□□□□□ -1.86
LINC00393-201ENST00000443621 CIZ1Q9ULV3 898 aaPredicted RBP3.45□□□□□ -1.86
LINC00393-201ENST00000443621 TAF1LQ8IZX4 1826 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 SCN7AQ01118 1682 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 PALLDQ8WX93 1383 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 PLSCR1O15162 318 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 PDE8AO60658 829 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 RPS6KA4O75676 772 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 SASH1O94885 1247 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 ZFYP08048 801 aaPredicted RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 IFIT2P09913 472 aaKnown RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 MYL6BP14649 208 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 GSPT1P15170 499 aaKnown RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 SDSP20132 328 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 PRIM1P49642 420 aaKnown RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 MFAP1P55081 439 aaKnown RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 TMEM132AQ24JP5 1023 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 CCDC57Q2TAC2 916 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 CWF19L2Q2TBE0 894 aaKnown RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 TSGA10IPQ3SY00 556 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 TBC1D9Q6ZT07 1266 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 NLRP10Q86W26 655 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 DNAJC10Q8IXB1 793 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 FBXL16Q8N461 479 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 FLAD1Q8NFF5 587 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 KCNB2Q92953 911 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 SUCLG2Q96I99 432 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 MYD88Q99836 296 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 USP26Q9BXU7 913 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 TM6SF1Q9BZW5 370 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 BCL11BQ9C0K0 894 aaPredicted RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 NYXQ9GZU5 481 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 C1orf115Q9H7X2 142 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 CWC22Q9HCG8 908 aaKnown RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 HMG20BQ9P0W2 317 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 NARFQ9UHQ1 456 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 ASAP1Q9ULH1 1129 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 EXOC6BQ9Y2D4 811 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 BTAF1O14981 1849 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 COL24A1Q17RW2 1714 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 DDX60Q8IY21 1712 aaKnown RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 LRP5O75197 1615 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 PDS5AQ29RF7 1337 aaKnown RBP3.44□□□□□ -1.86
LINC00393-201ENST00000443621 MROH5Q6ZUA9 1318 aa3.44□□□□□ -1.86
LINC00393-201ENST00000443621 RPAP1Q9BWH6 1393 aaPredicted RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 PRAMEF22A3QJZ6 481 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 EYA2O00167 538 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 SGSM2O43147 1006 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 ST18O60284 1047 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 PTCD1O75127 700 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 ADAMTS2O95450 1211 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 A1BGP04217 495 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 CHMLP26374 656 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 ATP6V1AP38606 617 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 RBM6P78332 1123 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 PIP4K2BP78356 416 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 AIMP1Q12904 312 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 IFIT5Q13325 482 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 TTF1Q15361 905 aaPredicted RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 SF3B3Q15393 1217 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms